RNA–Protein interactions for RNA: ENST00000519065.5

HDAC2-205, Transcript of histone deacetylase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC2, Length 9,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-205ENST00000519065 CCDC3Q9BQI4 270 aa11.66□□□□□ -0.54
HDAC2-205ENST00000519065 KBTBD4Q9NVX7 518 aa11.66□□□□□ -0.54
HDAC2-205ENST00000519065 PNMA8BQ9ULN7 279 aaPredicted RBP11.66□□□□□ -0.54
HDAC2-205ENST00000519065 CLTCL1P53675 1640 aa11.66□□□□□ -0.54
HDAC2-205ENST00000519065 SSX4O60224 188 aa11.66□□□□□ -0.54
HDAC2-205ENST00000519065 LTA4HP09960 611 aaKnown RBP11.66□□□□□ -0.54
HDAC2-205ENST00000519065 IFI30P13284 250 aa11.66□□□□□ -0.54
HDAC2-205ENST00000519065 COX7A2P14406 83 aa11.66□□□□□ -0.54
HDAC2-205ENST00000519065 MTHFRP42898 656 aa11.66□□□□□ -0.54
HDAC2-205ENST00000519065 TMC8Q8IU68 726 aa11.66□□□□□ -0.54
HDAC2-205ENST00000519065 C1GALT1C1Q96EU7 318 aa11.66□□□□□ -0.54
HDAC2-205ENST00000519065 GFM1Q96RP9 751 aaKnown RBP11.66□□□□□ -0.54
HDAC2-205ENST00000519065 FAM126AQ9BYI3 521 aaPredicted RBP11.66□□□□□ -0.54
HDAC2-205ENST00000519065 LRRC19Q9H756 370 aa11.66□□□□□ -0.54
HDAC2-205ENST00000519065 GABBR1Q9UBS5 961 aa11.66□□□□□ -0.54
HDAC2-205ENST00000519065 CCNT2O60583 730 aaKnown RBP11.65□□□□□ -0.54
HDAC2-205ENST00000519065 PAPSS2O95340 614 aaPredicted RBP11.65□□□□□ -0.54
HDAC2-205ENST00000519065 CPSF4O95639 269 aaKnown RBP11.65□□□□□ -0.54
HDAC2-205ENST00000519065 RPL21P46778 160 aaKnown RBP11.65□□□□□ -0.54
HDAC2-205ENST00000519065 CCDC58Q4VC31 144 aa11.65□□□□□ -0.54
HDAC2-205ENST00000519065 ATCAYQ86WG3 371 aa11.65□□□□□ -0.54
HDAC2-205ENST00000519065 LINC00471Q8N535 108 aa11.65□□□□□ -0.54
HDAC2-205ENST00000519065 METTL25Q8N6Q8 603 aa11.65□□□□□ -0.54
HDAC2-205ENST00000519065 SLC4A11Q8NBS3 891 aa11.65□□□□□ -0.54
HDAC2-205ENST00000519065 KCTD7Q96MP8 289 aa11.65□□□□□ -0.54
HDAC2-205ENST00000519065 PCDH10Q9P2E7 1040 aa11.65□□□□□ -0.54
HDAC2-205ENST00000519065 C1orf196B1AJZ1 125 aa11.65□□□□□ -0.54
HDAC2-205ENST00000519065 MAGEA3P43357 314 aa11.65□□□□□ -0.54
HDAC2-205ENST00000519065 CLCN5P51795 746 aa11.65□□□□□ -0.54
HDAC2-205ENST00000519065 HYIQ5T013 277 aa11.65□□□□□ -0.54
HDAC2-205ENST00000519065 UBXN11Q5T124 520 aa11.65□□□□□ -0.54
HDAC2-205ENST00000519065 SPOCD1Q6ZMY3 1216 aa11.65□□□□□ -0.54
HDAC2-205ENST00000519065 HTR3CQ8WXA8 447 aa11.65□□□□□ -0.54
HDAC2-205ENST00000519065 HERC2P3Q9BVR0 1158 aa11.65□□□□□ -0.54
HDAC2-205ENST00000519065 TMEM184CQ9NVA4 438 aa11.65□□□□□ -0.54
HDAC2-205ENST00000519065 ALDH9A1P49189 494 aa11.65□□□□□ -0.54
HDAC2-205ENST00000519065 SCNN1DP51172 638 aa11.65□□□□□ -0.54
HDAC2-205ENST00000519065 ZNF697Q5TEC3 545 aa11.65□□□□□ -0.54
HDAC2-205ENST00000519065 FAM13CQ8NE31 585 aa11.65□□□□□ -0.54
HDAC2-205ENST00000519065 SH3RF3Q8TEJ3 882 aaPredicted RBP11.65□□□□□ -0.54
HDAC2-205ENST00000519065 ZNF358Q9NW07 568 aa11.65□□□□□ -0.54
HDAC2-205ENST00000519065 HSBP1L1C9JCN9 74 aa11.65□□□□□ -0.54
HDAC2-205ENST00000519065 COL6A2P12110 1019 aa11.65□□□□□ -0.54
HDAC2-205ENST00000519065 ANXA3P12429 323 aa11.65□□□□□ -0.54
HDAC2-205ENST00000519065 CES1P23141 567 aa11.65□□□□□ -0.54
HDAC2-205ENST00000519065 HERVK_113P62684 666 aa11.65□□□□□ -0.54
HDAC2-205ENST00000519065 CDKL1Q00532 357 aa11.65□□□□□ -0.54
HDAC2-205ENST00000519065 TRAM1Q15629 374 aa11.65□□□□□ -0.54
HDAC2-205ENST00000519065 MMP27Q9H306 513 aa11.65□□□□□ -0.54
HDAC2-205ENST00000519065 SYNDIG1Q9H7V2 258 aa11.65□□□□□ -0.54
HDAC2-205ENST00000519065 C19orf12Q9NSK7 152 aa11.65□□□□□ -0.54
HDAC2-205ENST00000519065 H3BNH8 94 aa11.65□□□□□ -0.54
HDAC2-205ENST00000519065 SLC28A1O00337 649 aa11.65□□□□□ -0.54
HDAC2-205ENST00000519065 OR10H3O60404 316 aa11.65□□□□□ -0.54
HDAC2-205ENST00000519065 RAB12Q6IQ22 244 aa11.65□□□□□ -0.54
HDAC2-205ENST00000519065 FAM199XQ6PEV8 388 aaPredicted RBP11.65□□□□□ -0.54
HDAC2-205ENST00000519065 SLC44A3Q8N4M1 653 aa11.65□□□□□ -0.54
HDAC2-205ENST00000519065 RDH12Q96NR8 316 aa11.65□□□□□ -0.54
HDAC2-205ENST00000519065 POLD4Q9HCU8 107 aa11.65□□□□□ -0.54
HDAC2-205ENST00000519065 GJA3Q9Y6H8 435 aa11.65□□□□□ -0.54
HDAC2-205ENST00000519065 IQGAP1P46940 1657 aa11.65□□□□□ -0.54
HDAC2-205ENST00000519065 FADS2O95864 444 aaKnown RBP11.65□□□□□ -0.54
HDAC2-205ENST00000519065 HLA-DRAP01903 254 aa11.65□□□□□ -0.54
HDAC2-205ENST00000519065 POU5F1Q01860 360 aaKnown RBP11.65□□□□□ -0.54
HDAC2-205ENST00000519065 CSHL1Q14406 222 aa11.65□□□□□ -0.54
HDAC2-205ENST00000519065 CARTPTQ16568 116 aa11.65□□□□□ -0.54
HDAC2-205ENST00000519065 KCTD19Q17RG1 926 aaPredicted RBP11.65□□□□□ -0.54
HDAC2-205ENST00000519065 RIOX2Q8IUF8 465 aa11.65□□□□□ -0.54
HDAC2-205ENST00000519065 SMAD5Q99717 465 aaKnown RBP11.65□□□□□ -0.54
HDAC2-205ENST00000519065 RBMX2Q9Y388 322 aaKnown RBP11.65□□□□□ -0.54
HDAC2-205ENST00000519065 ERVK-7P63135 1459 aa11.65□□□□□ -0.55
HDAC2-205ENST00000519065 EGFRP00533 1210 aa11.65□□□□□ -0.55
HDAC2-205ENST00000519065 RASGEF1BQ0VAM2 473 aa11.65□□□□□ -0.55
HDAC2-205ENST00000519065 TRPM4Q8TD43 1214 aa11.65□□□□□ -0.55
HDAC2-205ENST00000519065 FAM84AQ96KN4 292 aa11.65□□□□□ -0.55
HDAC2-205ENST00000519065 SERPINB11Q96P15 392 aa11.65□□□□□ -0.55
HDAC2-205ENST00000519065 C1QTNF7Q9BXJ2 289 aa11.65□□□□□ -0.55
HDAC2-205ENST00000519065 MCAMP43121 646 aa11.64□□□□□ -0.55
HDAC2-205ENST00000519065 RAB27AP51159 221 aa11.64□□□□□ -0.55
HDAC2-205ENST00000519065 ERVK-9P63128 1117 aa11.64□□□□□ -0.55
HDAC2-205ENST00000519065 SPIBQ01892 262 aa11.64□□□□□ -0.55
HDAC2-205ENST00000519065 NKAPLQ5M9Q1 402 aa11.64□□□□□ -0.55
HDAC2-205ENST00000519065 ANGEL2Q5VTE6 544 aaKnown RBP11.64□□□□□ -0.55
HDAC2-205ENST00000519065 ADGRF4Q8IZF3 695 aa11.64□□□□□ -0.55
HDAC2-205ENST00000519065 ZSWIM2Q8NEG5 633 aa11.64□□□□□ -0.55
HDAC2-205ENST00000519065 FATE1Q969F0 183 aa11.64□□□□□ -0.55
HDAC2-205ENST00000519065 LMAN2LQ9H0V9 348 aa11.64□□□□□ -0.55
HDAC2-205ENST00000519065 GREM2Q9H772 168 aa11.64□□□□□ -0.55
HDAC2-205ENST00000519065 ZNF70Q9UC06 446 aaPredicted RBP11.64□□□□□ -0.55
HDAC2-205ENST00000519065 RTTNQ86VV8 2226 aa11.64□□□□□ -0.55
HDAC2-205ENST00000519065 MAGI2Q86UL8 1455 aa11.64□□□□□ -0.55
HDAC2-205ENST00000519065 ZNF335Q9H4Z2 1342 aaPredicted RBP11.64□□□□□ -0.55
HDAC2-205ENST00000519065 USP17L3A6NCW0 530 aa11.64□□□□□ -0.55
HDAC2-205ENST00000519065 USP17L4A6NCW7 530 aa11.64□□□□□ -0.55
HDAC2-205ENST00000519065 ZNF701M0R085 212 aaPredicted RBP11.64□□□□□ -0.55
HDAC2-205ENST00000519065 SLC9A3R1O14745 358 aaPredicted RBP11.64□□□□□ -0.55
HDAC2-205ENST00000519065 CYP2A13Q16696 494 aa11.64□□□□□ -0.55
HDAC2-205ENST00000519065 KLHDC10Q6PID8 442 aa11.64□□□□□ -0.55
HDAC2-205ENST00000519065 USP17L1Q7RTZ2 530 aa11.64□□□□□ -0.55
HDAC2-205ENST00000519065 NT5DC3Q86UY8 548 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms