RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 TRIM3O75382 744 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 USP2O75604 605 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 SEMA3DO95025 777 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 SLC4A1P02730 911 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 S100A9P06702 114 aaKnown RBP4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 CKBP12277 381 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 FDPSP14324 419 aaKnown RBP4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 AOC1P19801 751 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 NCF2P19878 526 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 RAB4AP20338 218 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 ITGALP20701 1170 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 PIK3R1P27986 724 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 CDC25AP30304 524 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 FOXN2P32314 431 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 CYP2C18P33260 490 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 SOX5P35711 763 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 HPCAL1P37235 193 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 GIPRP48546 466 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 DGKQP52824 942 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 PPP5CP53041 499 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 AIF1P55008 147 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 MFAP3P55082 362 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 PCBP3P57721 371 aaKnown RBP4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 RAB25P57735 213 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 HAND2P61296 217 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 POU6F2P78424 691 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 PLIN5Q00G26 463 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 GALK2Q01415 458 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 OTUD4Q01804 1114 aaKnown RBP4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 BTKQ06187 659 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 TRAF2Q12933 501 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 NFATC3Q12968 1075 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 SLC12A1Q13621 1099 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 GALEQ14376 348 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 RRP1BQ14684 758 aaKnown RBP4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 CLCA4Q14CN2 919 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 MAN2A1Q16706 1144 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 PLEKHG6Q3KR16 790 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 SUPT20HL1Q3ZLR7 823 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 PRR16Q569H4 304 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 BRDTQ58F21 947 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 YIF1BQ5BJH7 314 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 DGKKQ5KSL6 1271 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 C10orf62Q5T681 223 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 GRTP1Q5TC63 336 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 IRAK1BP1Q5VVH5 260 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 AGAP6Q5VW22 663 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 KIAA1614Q5VZ46 1190 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 KRT40Q6A162 431 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 SLC9A4Q6AI14 798 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 ELP2Q6IA86 826 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 TMEM132EQ6IEE7 984 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 ZNF425Q6IV72 752 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 GALNT18Q6P9A2 607 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 TTC33Q6PID6 262 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 CRTC1Q6UUV9 634 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 CYP20A1Q6UW02 462 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 OTOAQ7RTW8 1153 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 KCNK18Q7Z418 384 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 JAMLQ86YT9 394 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 WDR49Q8IV35 697 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 TTC5Q8N0Z6 440 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 FBXW8Q8N3Y1 598 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 TBC1D19Q8N5T2 526 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 METTL13Q8N6R0 699 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 ZNF655Q8N720 491 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 MARCH10Q8NA82 808 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 C7orf57Q8NEG2 295 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 FBXO25Q8TCJ0 367 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 DENND1AQ8TEH3 1009 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 DEPDC1BQ8WUY9 529 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 SLC13A3Q8WWT9 602 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 SMG7Q92540 1137 aaKnown RBP4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 FIG4Q92562 907 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 FATE1Q969F0 183 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 ATP6V1E2Q96A05 226 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 ANAPC16Q96DE5 110 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 MTMR8Q96EF0 704 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 HS6ST2Q96MM7 605 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 AGAP4Q96P64 663 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 ASB2Q96Q27 587 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 RBM15Q96T37 977 aaKnown RBP eCLIP4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 CNPY3Q9BT09 278 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 MCMBPQ9BTE3 642 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 CINPQ9BW66 212 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 TSSK1BQ9BXA7 367 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 SLC19A3Q9BZV2 496 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 BRINP2Q9C0B6 783 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 QRSL1Q9H0R6 528 aaKnown RBP4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 NEUROG2Q9H2A3 272 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 EPS8L2Q9H6S3 715 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 SMYD3Q9H7B4 428 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 NGRNQ9NPE2 291 aaKnown RBP4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 SLC35C2Q9NQQ7 365 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 KLHL1Q9NR64 748 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 CHST12Q9NRB3 414 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 FBXO8Q9NRD0 319 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 CNNM1Q9NRU3 951 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms