RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 TMEM60Q9H2L4 133 aa3.2□□□□□ -1.9
SCARNA13-201ENST00000516672 CUEDC2Q9H467 287 aa3.2□□□□□ -1.9
SCARNA13-201ENST00000516672 DHX33Q9H6R0 707 aaKnown RBP3.2□□□□□ -1.9
SCARNA13-201ENST00000516672 LHX9Q9NQ69 397 aa3.2□□□□□ -1.9
SCARNA13-201ENST00000516672 GPR27Q9NS67 375 aa3.2□□□□□ -1.9
SCARNA13-201ENST00000516672 SLC38A7Q9NVC3 462 aa3.2□□□□□ -1.9
SCARNA13-201ENST00000516672 SYBUQ9NX95 663 aa3.2□□□□□ -1.9
SCARNA13-201ENST00000516672 ARHGEF38Q9NXL2 777 aa3.2□□□□□ -1.9
SCARNA13-201ENST00000516672 PLK2Q9NYY3 685 aa3.2□□□□□ -1.9
SCARNA13-201ENST00000516672 PDP1Q9P0J1 537 aaPredicted RBP3.2□□□□□ -1.9
SCARNA13-201ENST00000516672 ABI3Q9P2A4 366 aa3.2□□□□□ -1.9
SCARNA13-201ENST00000516672 IPO11Q9UI26 975 aaKnown RBP3.2□□□□□ -1.9
SCARNA13-201ENST00000516672 PADI1Q9ULC6 663 aa3.2□□□□□ -1.9
SCARNA13-201ENST00000516672 INTUQ9ULD6 942 aa3.2□□□□□ -1.9
SCARNA13-201ENST00000516672 GPR34Q9UPC5 381 aa3.2□□□□□ -1.9
SCARNA13-201ENST00000516672 ALMS1Q8TCU4 4167 aa3.2□□□□□ -1.9
SCARNA13-201ENST00000516672 PLCE1Q9P212 2302 aa3.2□□□□□ -1.9
SCARNA13-201ENST00000516672 FAM237AA0A1B0GTK4 181 aa3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 VWA3AA6NCI4 1184 aa3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 ZNF840PA6NDX5 716 aa3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 A6NNZ2 444 aa3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 SMTNL1A8MU46 457 aa3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 H0YCG3 227 aa3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 TULP2O00295 520 aa3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 WNT7AO00755 349 aa3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 PPP1R12AO14974 1030 aaPredicted RBP3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 TIMM44O43615 452 aa3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 CHMP2AO43633 222 aa3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 RGS9O75916 674 aaPredicted RBP3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 LTFP02788 710 aa3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 PROCP04070 461 aa3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 HRGP04196 525 aa3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 MYL1P05976 194 aa3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 PTMAP06454 111 aaKnown RBP3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 MBL2P11226 248 aaPredicted RBP3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 TSHRP16473 764 aa3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 PTPN1P18031 435 aaKnown RBP3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 CMA1P23946 247 aa3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 TACR1P25103 407 aa3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 FMO4P31512 558 aa3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 SLC8A1P32418 973 aa3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 ARL2P36404 184 aa3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 CCT6AP40227 531 aaKnown RBP3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 EFNA5P52803 228 aa3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 SMTNP53814 917 aa3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 NCKAP1LP55160 1127 aa3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 ATP5J2P56134 94 aa3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 RPS15P62841 145 aaKnown RBP3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 AMPD3Q01432 767 aa3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 SMARCB1Q12824 385 aa3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 EIF2B5Q13144 721 aaKnown RBP3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 TFDP1Q14186 410 aa3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 PPP2R5AQ15172 486 aa3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 TCEA2Q15560 299 aa3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 IL17AQ16552 155 aa3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 TMEM119Q4V9L6 283 aa3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 CERCAMQ5T4B2 595 aa3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 SAMD5Q5TGI4 173 aa3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 CYB5R2Q6BCY4 276 aa3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 ADALQ6DHV7 355 aa3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 ZFAND6Q6FIF0 208 aa3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 NCAPH2Q6IBW4 605 aa3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 FAM199XQ6PEV8 388 aaPredicted RBP3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 NXPE4Q6UWF7 544 aa3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 ALKAL1Q6UXT8 129 aa3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 CCDC73Q6ZRK6 1079 aa3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 RBM43Q6ZSC3 357 aaKnown RBP3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 SYT2Q8N9I0 419 aaPredicted RBP3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 IQUBQ8NA54 791 aa3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 CATSPER1Q8NEC5 780 aa3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 OR4D9Q8NGE8 314 aa3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 OR1N1Q8NGS0 311 aa3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 FBXO30Q8TB52 745 aa3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 SNX29Q8TEQ0 813 aa3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 SCG3Q8WXD2 468 aaKnown RBP3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 SYAP1Q96A49 352 aaPredicted RBP3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 C18orf25Q96B23 403 aaPredicted RBP3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 CALML4Q96GE6 196 aa3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 CCDC34Q96HJ3 373 aa3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 DYDC2Q96IM9 177 aa3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 PIWIL1Q96J94 861 aaKnown RBP3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 DRC1Q96MC2 740 aa3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 USP28Q96RU2 1077 aa3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 OCSTAMPQ9BR26 566 aa3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 MMTAG2Q9BU76 263 aaKnown RBP3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 BRD8Q9H0E9 1235 aa3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 C2orf40Q9H1Z8 148 aa3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 MTG2Q9H4K7 406 aa3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 PDZD7Q9H5P4 517 aa3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 MAGEF1Q9HAY2 307 aa3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 RGL1Q9NZL6 768 aa3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 OGFRQ9NZT2 677 aa3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 TMEM9Q9P0T7 183 aa3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 FBXO2Q9UK22 296 aaPredicted RBP3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 ODF2LQ9ULJ1 636 aa3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 KCNS2Q9ULS6 477 aa3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 SH3BP1Q9Y3L3 701 aa3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 CLIC4Q9Y696 253 aa3.19□□□□□ -1.9
SCARNA13-201ENST00000516672 PRR14LQ5THK1 2151 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms