RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 ULK1O75385 1050 aa-0.78□□□□□ -2.53
RNU6-542P-201ENST00000516405 TRMUO75648 421 aaKnown RBP-0.78□□□□□ -2.53
RNU6-542P-201ENST00000516405 TMCC1O94876 653 aa-0.78□□□□□ -2.53
RNU6-542P-201ENST00000516405 SEC31AO94979 1220 aaKnown RBP-0.78□□□□□ -2.53
RNU6-542P-201ENST00000516405 NGFP01138 241 aa-0.78□□□□□ -2.53
RNU6-542P-201ENST00000516405 ALDOCP09972 364 aaKnown RBP-0.78□□□□□ -2.53
RNU6-542P-201ENST00000516405 PNMTP11086 282 aa-0.78□□□□□ -2.53
RNU6-542P-201ENST00000516405 NR2C1P13056 603 aa-0.78□□□□□ -2.53
RNU6-542P-201ENST00000516405 TBPP20226 339 aa-0.78□□□□□ -2.53
RNU6-542P-201ENST00000516405 FASP25445 335 aa-0.78□□□□□ -2.53
RNU6-542P-201ENST00000516405 KIR2DS4P43632 304 aa-0.78□□□□□ -2.53
RNU6-542P-201ENST00000516405 ISL1P61371 349 aa-0.78□□□□□ -2.53
RNU6-542P-201ENST00000516405 MOBPQ13875 183 aa-0.78□□□□□ -2.53
RNU6-542P-201ENST00000516405 PTK2BQ14289 1009 aa-0.78□□□□□ -2.53
RNU6-542P-201ENST00000516405 PLS1Q14651 629 aa-0.78□□□□□ -2.53
RNU6-542P-201ENST00000516405 FASTKD3Q14CZ7 662 aaKnown RBP-0.78□□□□□ -2.53
RNU6-542P-201ENST00000516405 C2orf27AQ580R0 203 aa-0.78□□□□□ -2.53
RNU6-542P-201ENST00000516405 VWA2Q5GFL6 755 aa-0.78□□□□□ -2.53
RNU6-542P-201ENST00000516405 UTF1Q5T230 341 aa-0.78□□□□□ -2.53
RNU6-542P-201ENST00000516405 ATAD3CQ5T2N8 411 aa-0.78□□□□□ -2.53
RNU6-542P-201ENST00000516405 CNNM4Q6P4Q7 775 aa-0.78□□□□□ -2.53
RNU6-542P-201ENST00000516405 FAM171BQ6P995 826 aa-0.78□□□□□ -2.53
RNU6-542P-201ENST00000516405 INTS8Q75QN2 995 aaKnown RBP-0.78□□□□□ -2.53
RNU6-542P-201ENST00000516405 SERPINA11Q86U17 422 aa-0.78□□□□□ -2.53
RNU6-542P-201ENST00000516405 KLBQ86Z14 1044 aa-0.78□□□□□ -2.53
RNU6-542P-201ENST00000516405 ZNF34Q8IZ26 560 aa-0.78□□□□□ -2.53
RNU6-542P-201ENST00000516405 RTL3Q8N8U3 475 aaKnown RBP-0.78□□□□□ -2.53
RNU6-542P-201ENST00000516405 SRSF12Q8WXF0 261 aaKnown RBP-0.78□□□□□ -2.53
RNU6-542P-201ENST00000516405 CENPTQ96BT3 561 aa-0.78□□□□□ -2.53
RNU6-542P-201ENST00000516405 SIPA1Q96FS4 1042 aa-0.78□□□□□ -2.53
RNU6-542P-201ENST00000516405 COL21A1Q96P44 957 aa-0.78□□□□□ -2.53
RNU6-542P-201ENST00000516405 SYT17Q9BSW7 474 aa-0.78□□□□□ -2.53
RNU6-542P-201ENST00000516405 CLEC7AQ9BXN2 247 aa-0.78□□□□□ -2.53
RNU6-542P-201ENST00000516405 CCSER2Q9H7U1 834 aa-0.78□□□□□ -2.53
RNU6-542P-201ENST00000516405 PNPOQ9NVS9 261 aa-0.78□□□□□ -2.53
RNU6-542P-201ENST00000516405 NECAP2Q9NVZ3 263 aa-0.78□□□□□ -2.53
RNU6-542P-201ENST00000516405 THYN1Q9P016 225 aa-0.78□□□□□ -2.53
RNU6-542P-201ENST00000516405 SERPINB13Q9UIV8 391 aa-0.78□□□□□ -2.53
RNU6-542P-201ENST00000516405 PLEKHA6Q9Y2H5 1048 aa-0.78□□□□□ -2.53
RNU6-542P-201ENST00000516405 PAM16Q9Y3D7 125 aa-0.78□□□□□ -2.53
RNU6-542P-201ENST00000516405 UBIAD1Q9Y5Z9 338 aa-0.78□□□□□ -2.53
RNU6-542P-201ENST00000516405 SLIT3O75094 1523 aa-0.79□□□□□ -2.54
RNU6-542P-201ENST00000516405 FN1P02751 2386 aaKnown RBP-0.79□□□□□ -2.54
RNU6-542P-201ENST00000516405 HRNRQ86YZ3 2850 aaPredicted RBP-0.79□□□□□ -2.54
RNU6-542P-201ENST00000516405 A0A0A0MQY5 61 aa-0.79□□□□□ -2.54
RNU6-542P-201ENST00000516405 A0A0U1RQK1 487 aa-0.79□□□□□ -2.54
RNU6-542P-201ENST00000516405 C17orf102A2RUQ5 167 aa-0.79□□□□□ -2.54
RNU6-542P-201ENST00000516405 KIF3BO15066 747 aa-0.79□□□□□ -2.54
RNU6-542P-201ENST00000516405 TGFB1I1O43294 461 aa-0.79□□□□□ -2.54
RNU6-542P-201ENST00000516405 PLRG1O43660 514 aaKnown RBP-0.79□□□□□ -2.54
RNU6-542P-201ENST00000516405 ZIC3O60481 467 aa-0.79□□□□□ -2.54
RNU6-542P-201ENST00000516405 RFPL3O75679 317 aa-0.79□□□□□ -2.54
RNU6-542P-201ENST00000516405 MMP3P08254 477 aa-0.79□□□□□ -2.54
RNU6-542P-201ENST00000516405 IGHV4-38-2P0DP08 117 aa-0.79□□□□□ -2.54
RNU6-542P-201ENST00000516405 RPS2P15880 293 aaKnown RBP-0.79□□□□□ -2.54
RNU6-542P-201ENST00000516405 DRD1P21728 446 aa-0.79□□□□□ -2.54
RNU6-542P-201ENST00000516405 ITGA3P26006 1051 aa-0.79□□□□□ -2.54
RNU6-542P-201ENST00000516405 RFC1P35251 1148 aaPredicted RBP-0.79□□□□□ -2.54
RNU6-542P-201ENST00000516405 UBA7P41226 1012 aa-0.79□□□□□ -2.54
RNU6-542P-201ENST00000516405 STAT1P42224 750 aa-0.79□□□□□ -2.54
RNU6-542P-201ENST00000516405 KIR3DL2P43630 455 aa-0.79□□□□□ -2.54
RNU6-542P-201ENST00000516405 TBX4P57082 545 aa-0.79□□□□□ -2.54
RNU6-542P-201ENST00000516405 KCNJ10P78508 379 aa-0.79□□□□□ -2.54
RNU6-542P-201ENST00000516405 GTF2H2Q13888 395 aa-0.79□□□□□ -2.54
RNU6-542P-201ENST00000516405 HNRNPDQ14103 355 aaKnown RBP-0.79□□□□□ -2.54
RNU6-542P-201ENST00000516405 INSCQ1MX18 579 aa-0.79□□□□□ -2.54
RNU6-542P-201ENST00000516405 KHDC1LQ5JSQ8 128 aa-0.79□□□□□ -2.54
RNU6-542P-201ENST00000516405 LMBRD2Q68DH5 695 aaPredicted RBP-0.79□□□□□ -2.54
RNU6-542P-201ENST00000516405 TRNP1Q6NT89 227 aa-0.79□□□□□ -2.54
RNU6-542P-201ENST00000516405 ERAP2Q6P179 960 aa-0.79□□□□□ -2.54
RNU6-542P-201ENST00000516405 GTF2H2CQ6P1K8 395 aa-0.79□□□□□ -2.54
RNU6-542P-201ENST00000516405 XRRA1Q6P2D8 792 aa-0.79□□□□□ -2.54
RNU6-542P-201ENST00000516405 TIPARPQ7Z3E1 657 aaKnown RBP-0.79□□□□□ -2.54
RNU6-542P-201ENST00000516405 DENND6AQ8IWF6 608 aa-0.79□□□□□ -2.54
RNU6-542P-201ENST00000516405 DCLK2Q8N568 766 aa-0.79□□□□□ -2.54
RNU6-542P-201ENST00000516405 CEP70Q8NHQ1 597 aa-0.79□□□□□ -2.54
RNU6-542P-201ENST00000516405 ARRDC2Q8TBH0 407 aa-0.79□□□□□ -2.54
RNU6-542P-201ENST00000516405 CHPT1Q8WUD6 406 aa-0.79□□□□□ -2.54
RNU6-542P-201ENST00000516405 RSC1A1Q92681 617 aa-0.79□□□□□ -2.54
RNU6-542P-201ENST00000516405 MAGED4Q96JG8 741 aa-0.79□□□□□ -2.54
RNU6-542P-201ENST00000516405 PSD2Q9BQI7 771 aa-0.79□□□□□ -2.54
RNU6-542P-201ENST00000516405 MMTAG2Q9BU76 263 aaKnown RBP-0.79□□□□□ -2.54
RNU6-542P-201ENST00000516405 ING2Q9H160 280 aa-0.79□□□□□ -2.54
RNU6-542P-201ENST00000516405 HEXA-AS1Q9H8Q6 139 aa-0.79□□□□□ -2.54
RNU6-542P-201ENST00000516405 RXFP3Q9NSD7 469 aa-0.79□□□□□ -2.54
RNU6-542P-201ENST00000516405 LMBRD1Q9NUN5 540 aa-0.79□□□□□ -2.54
RNU6-542P-201ENST00000516405 KLHL42Q9P2K6 505 aa-0.79□□□□□ -2.54
RNU6-542P-201ENST00000516405 ZNF223Q9UK11 482 aaPredicted RBP-0.79□□□□□ -2.54
RNU6-542P-201ENST00000516405 CNTN6Q9UQ52 1028 aa-0.79□□□□□ -2.54
RNU6-542P-201ENST00000516405 MST1RQ04912 1400 aa-0.8□□□□□ -2.54
RNU6-542P-201ENST00000516405 SHANK1Q9Y566 2161 aa-0.8□□□□□ -2.54
RNU6-542P-201ENST00000516405 TNKS1BP1Q9C0C2 1729 aaKnown RBP-0.8□□□□□ -2.54
RNU6-542P-201ENST00000516405 MUC12Q9UKN1 5478 aa-0.8□□□□□ -2.54
RNU6-542P-201ENST00000516405 CAPN8A6NHC0 703 aa-0.8□□□□□ -2.54
RNU6-542P-201ENST00000516405 PLOD2O00469 737 aa-0.8□□□□□ -2.54
RNU6-542P-201ENST00000516405 DEDDO75618 318 aa-0.8□□□□□ -2.54
RNU6-542P-201ENST00000516405 DHRS4L1P0CG22 281 aa-0.8□□□□□ -2.54
RNU6-542P-201ENST00000516405 RNASE2P10153 161 aaKnown RBP-0.8□□□□□ -2.54
RNU6-542P-201ENST00000516405 CD72P21854 359 aa-0.8□□□□□ -2.54
RNU6-542P-201ENST00000516405 MMP8P22894 467 aa-0.8□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms