RNA–Protein interactions for RNA: ENST00000515180.5

CDK7-212, Transcript of cyclin dependent kinase 7, humanhuman

TSL 3

Gene CDK7, Length 486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-212ENST00000515180 CEP41Q9BYV8 373 aa13.1□□□□□ -0.31
CDK7-212ENST00000515180 POLR1EQ9GZS1 481 aaKnown RBP13.1□□□□□ -0.31
CDK7-212ENST00000515180 SPASTQ9UBP0 616 aa13.1□□□□□ -0.31
CDK7-212ENST00000515180 PHTF1Q9UMS5 762 aa13.1□□□□□ -0.31
CDK7-212ENST00000515180 CHKBQ9Y259 395 aa13.1□□□□□ -0.31
CDK7-212ENST00000515180 ALG6Q9Y672 507 aa13.1□□□□□ -0.31
CDK7-212ENST00000515180 AKAP13Q12802 2813 aa13.09□□□□□ -0.31
CDK7-212ENST00000515180 RCCD1A6NED2 376 aa13.09□□□□□ -0.31
CDK7-212ENST00000515180 APOL1O14791 398 aa13.09□□□□□ -0.31
CDK7-212ENST00000515180 FZD6O60353 706 aa13.09□□□□□ -0.31
CDK7-212ENST00000515180 CAPNS1P04632 268 aa13.09□□□□□ -0.31
CDK7-212ENST00000515180 C1SP09871 688 aa13.09□□□□□ -0.31
CDK7-212ENST00000515180 CYP2A6P11509 494 aaPredicted RBP13.09□□□□□ -0.31
CDK7-212ENST00000515180 KRT10P13645 584 aa13.09□□□□□ -0.31
CDK7-212ENST00000515180 TSHRP16473 764 aa13.09□□□□□ -0.31
CDK7-212ENST00000515180 HNF1BP35680 557 aa13.09□□□□□ -0.31
CDK7-212ENST00000515180 SLC1A1P43005 524 aa13.09□□□□□ -0.31
CDK7-212ENST00000515180 MARCKSL1P49006 195 aa13.09□□□□□ -0.31
CDK7-212ENST00000515180 PEX5P50542 639 aa13.09□□□□□ -0.31
CDK7-212ENST00000515180 ZBTB17Q13105 803 aa13.09□□□□□ -0.31
CDK7-212ENST00000515180 TARDBPQ13148 414 aaKnown RBP eCLIP13.09□□□□□ -0.31
CDK7-212ENST00000515180 MTM1Q13496 603 aa13.09□□□□□ -0.31
CDK7-212ENST00000515180 CAMK2BQ13554 666 aa13.09□□□□□ -0.31
CDK7-212ENST00000515180 CDKN3Q16667 212 aa13.09□□□□□ -0.31
CDK7-212ENST00000515180 RALGPS1Q5JS13 557 aa13.09□□□□□ -0.31
CDK7-212ENST00000515180 LRRC38Q5VT99 294 aa13.09□□□□□ -0.31
CDK7-212ENST00000515180 SLC9A4Q6AI14 798 aa13.09□□□□□ -0.31
CDK7-212ENST00000515180 TMPRSS12Q86WS5 348 aa13.09□□□□□ -0.31
CDK7-212ENST00000515180 CNTD1Q8N815 330 aa13.09□□□□□ -0.31
CDK7-212ENST00000515180 BTN2A2Q8WVV5 523 aa13.09□□□□□ -0.31
CDK7-212ENST00000515180 HDAC11Q96DB2 347 aa13.09□□□□□ -0.31
CDK7-212ENST00000515180 IL12RB2Q99665 862 aa13.09□□□□□ -0.31
CDK7-212ENST00000515180 LGR4Q9BXB1 951 aa13.09□□□□□ -0.31
CDK7-212ENST00000515180 SLC13A1Q9BZW2 595 aa13.09□□□□□ -0.31
CDK7-212ENST00000515180 MRPL40Q9NQ50 206 aaKnown RBP13.09□□□□□ -0.31
CDK7-212ENST00000515180 SALL4Q9UJQ4 1053 aa13.09□□□□□ -0.31
CDK7-212ENST00000515180 CSNK1G3Q9Y6M4 447 aa13.09□□□□□ -0.31
CDK7-212ENST00000515180 MYLKQ15746 1914 aa13.09□□□□□ -0.31
CDK7-212ENST00000515180 LRP4O75096 1905 aa13.08□□□□□ -0.32
CDK7-212ENST00000515180 A0A1W2PQ67 120 aa13.08□□□□□ -0.32
CDK7-212ENST00000515180 CPED1A4D0V7 1026 aa13.08□□□□□ -0.32
CDK7-212ENST00000515180 TMEM202A6NGA9 273 aa13.08□□□□□ -0.32
CDK7-212ENST00000515180 TOR1BO14657 336 aa13.08□□□□□ -0.32
CDK7-212ENST00000515180 CASC3O15234 703 aaKnown RBP13.08□□□□□ -0.32
CDK7-212ENST00000515180 YY2O15391 372 aa13.08□□□□□ -0.32
CDK7-212ENST00000515180 PRLP01236 227 aa13.08□□□□□ -0.32
CDK7-212ENST00000515180 ANXA6P08133 673 aa13.08□□□□□ -0.32
CDK7-212ENST00000515180 MMP2P08253 660 aa13.08□□□□□ -0.32
CDK7-212ENST00000515180 CKMT1AP12532 417 aa13.08□□□□□ -0.32
CDK7-212ENST00000515180 CTSEP14091 401 aa13.08□□□□□ -0.32
CDK7-212ENST00000515180 MX2P20592 715 aa13.08□□□□□ -0.32
CDK7-212ENST00000515180 CYLC1P35663 651 aaPredicted RBP13.08□□□□□ -0.32
CDK7-212ENST00000515180 ETV3P41162 512 aa13.08□□□□□ -0.32
CDK7-212ENST00000515180 HK3P52790 923 aa13.08□□□□□ -0.32
CDK7-212ENST00000515180 SRP54P61011 504 aaKnown RBP13.08□□□□□ -0.32
CDK7-212ENST00000515180 INSM1Q01101 510 aaPredicted RBP13.08□□□□□ -0.32
CDK7-212ENST00000515180 ADCY2Q08462 1091 aa13.08□□□□□ -0.32
CDK7-212ENST00000515180 PPIDQ08752 370 aaKnown RBP13.08□□□□□ -0.32
CDK7-212ENST00000515180 AP1B1Q10567 949 aa13.08□□□□□ -0.32
CDK7-212ENST00000515180 SPA17Q15506 151 aa13.08□□□□□ -0.32
CDK7-212ENST00000515180 ODF2Q5BJF6 829 aa13.08□□□□□ -0.32
CDK7-212ENST00000515180 KAZNQ674X7 775 aa13.08□□□□□ -0.32
CDK7-212ENST00000515180 ALG1LQ6GMV1 187 aa13.08□□□□□ -0.32
CDK7-212ENST00000515180 PNCKQ6P2M8 343 aa13.08□□□□□ -0.32
CDK7-212ENST00000515180 CRTC1Q6UUV9 634 aa13.08□□□□□ -0.32
CDK7-212ENST00000515180 RAD9BQ6WBX8 426 aa13.08□□□□□ -0.32
CDK7-212ENST00000515180 Q6ZVL8 140 aa13.08□□□□□ -0.32
CDK7-212ENST00000515180 CBARPQ8N350 705 aaPredicted RBP13.08□□□□□ -0.32
CDK7-212ENST00000515180 FAM181AQ8N9Y4 354 aa13.08□□□□□ -0.32
CDK7-212ENST00000515180 TPCN2Q8NHX9 752 aa13.08□□□□□ -0.32
CDK7-212ENST00000515180 OR1E3Q8WZA6 343 aa13.08□□□□□ -0.32
CDK7-212ENST00000515180 SPOCK2Q92563 424 aa13.08□□□□□ -0.32
CDK7-212ENST00000515180 NUS1Q96E22 293 aa13.08□□□□□ -0.32
CDK7-212ENST00000515180 SCRN2Q96FV2 425 aa13.08□□□□□ -0.32
CDK7-212ENST00000515180 PDXPQ96GD0 296 aa13.08□□□□□ -0.32
CDK7-212ENST00000515180 WDR92Q96MX6 357 aa13.08□□□□□ -0.32
CDK7-212ENST00000515180 ZNF830Q96NB3 372 aaPredicted RBP13.08□□□□□ -0.32
CDK7-212ENST00000515180 DUSP23Q9BVJ7 150 aa13.08□□□□□ -0.32
CDK7-212ENST00000515180 DDX56Q9NY93 547 aaKnown RBP13.08□□□□□ -0.32
CDK7-212ENST00000515180 SEPT10Q9P0V9 454 aa13.08□□□□□ -0.32
CDK7-212ENST00000515180 SAE1Q9UBE0 346 aaPredicted RBP13.08□□□□□ -0.32
CDK7-212ENST00000515180 KLQ9UEF7 1012 aa13.08□□□□□ -0.32
CDK7-212ENST00000515180 CD84Q9UIB8 345 aa13.08□□□□□ -0.32
CDK7-212ENST00000515180 MOSPD1Q9UJG1 213 aa13.08□□□□□ -0.32
CDK7-212ENST00000515180 EPN1Q9Y6I3 576 aaPredicted RBP13.08□□□□□ -0.32
CDK7-212ENST00000515180 CEP295Q9C0D2 2601 aa13.07□□□□□ -0.32
CDK7-212ENST00000515180 A0A0J9YYE9 177 aa13.07□□□□□ -0.32
CDK7-212ENST00000515180 GOLGA6CA6NDK9 693 aa13.07□□□□□ -0.32
CDK7-212ENST00000515180 GOLGA6BA6NDN3 693 aa13.07□□□□□ -0.32
CDK7-212ENST00000515180 TMEM8BA6NDV4 472 aa13.07□□□□□ -0.32
CDK7-212ENST00000515180 SRRM3A6NNA2 597 aaPredicted RBP13.07□□□□□ -0.32
CDK7-212ENST00000515180 ZNF487B1APH4 448 aa13.07□□□□□ -0.32
CDK7-212ENST00000515180 RASGRP1O95267 797 aa13.07□□□□□ -0.32
CDK7-212ENST00000515180 NDUFA10O95299 355 aa13.07□□□□□ -0.32
CDK7-212ENST00000515180 TRBC1P01850 177 aa13.07□□□□□ -0.32
CDK7-212ENST00000515180 GOLGA6DP0CG33 693 aa13.07□□□□□ -0.32
CDK7-212ENST00000515180 PECAM1P16284 738 aaPredicted RBP13.07□□□□□ -0.32
CDK7-212ENST00000515180 HTR1BP28222 390 aa13.07□□□□□ -0.32
CDK7-212ENST00000515180 CD86P42081 329 aa13.07□□□□□ -0.32
CDK7-212ENST00000515180 CDKN2BP42772 138 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms