RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 SPATA32Q96LK8 384 aa10.53□□□□□ -0.72
CLDND1-227ENST00000513452 LGR4Q9BXB1 951 aa10.53□□□□□ -0.72
CLDND1-227ENST00000513452 SPRY4Q9C004 299 aa10.53□□□□□ -0.72
CLDND1-227ENST00000513452 GOLPH3LQ9H4A5 285 aa10.53□□□□□ -0.72
CLDND1-227ENST00000513452 WDR26Q9H7D7 661 aa10.53□□□□□ -0.72
CLDND1-227ENST00000513452 CARS2Q9HA77 564 aaKnown RBP10.53□□□□□ -0.72
CLDND1-227ENST00000513452 RMND1Q9NWS8 449 aa10.53□□□□□ -0.72
CLDND1-227ENST00000513452 TAAR2Q9P1P5 351 aa10.53□□□□□ -0.72
CLDND1-227ENST00000513452 PPARGC1AQ9UBK2 798 aaKnown RBP10.53□□□□□ -0.72
CLDND1-227ENST00000513452 PCDHGC3Q9UN70 934 aa10.53□□□□□ -0.72
CLDND1-227ENST00000513452 DOCK4Q8N1I0 1966 aa10.53□□□□□ -0.72
CLDND1-227ENST00000513452 CELSR2Q9HCU4 2923 aa10.52□□□□□ -0.72
CLDND1-227ENST00000513452 FAM237AA0A1B0GTK4 181 aa10.52□□□□□ -0.73
CLDND1-227ENST00000513452 BECN2A8MW95 431 aa10.52□□□□□ -0.73
CLDND1-227ENST00000513452 RAMP2O60895 175 aa10.52□□□□□ -0.73
CLDND1-227ENST00000513452 RECQL5O94762 991 aaPredicted RBP10.52□□□□□ -0.73
CLDND1-227ENST00000513452 AK4P27144 223 aaPredicted RBP10.52□□□□□ -0.73
CLDND1-227ENST00000513452 MAN1A1P33908 653 aa10.52□□□□□ -0.73
CLDND1-227ENST00000513452 STAT5AP42229 794 aa10.52□□□□□ -0.73
CLDND1-227ENST00000513452 MAPKAPK2P49137 400 aa10.52□□□□□ -0.73
CLDND1-227ENST00000513452 SNX16P57768 344 aa10.52□□□□□ -0.73
CLDND1-227ENST00000513452 PKP1Q13835 747 aa10.52□□□□□ -0.73
CLDND1-227ENST00000513452 UGP2Q16851 508 aa10.52□□□□□ -0.73
CLDND1-227ENST00000513452 COBLL1Q53SF7 1204 aa10.52□□□□□ -0.73
CLDND1-227ENST00000513452 CFAP58Q5T655 872 aa10.52□□□□□ -0.73
CLDND1-227ENST00000513452 FAM102AQ5T9C2 384 aaPredicted RBP10.52□□□□□ -0.73
CLDND1-227ENST00000513452 ZNF658Q5TYW1 1059 aaPredicted RBP10.52□□□□□ -0.73
CLDND1-227ENST00000513452 ERICH6BQ5W0A0 696 aa10.52□□□□□ -0.73
CLDND1-227ENST00000513452 TMEM71Q6P5X7 295 aa10.52□□□□□ -0.73
CLDND1-227ENST00000513452 GJB7Q6PEY0 223 aa10.52□□□□□ -0.73
CLDND1-227ENST00000513452 CEACAM20Q6UY09 585 aa10.52□□□□□ -0.73
CLDND1-227ENST00000513452 TMEM135Q86UB9 458 aa10.52□□□□□ -0.73
CLDND1-227ENST00000513452 RNF31Q96EP0 1072 aa10.52□□□□□ -0.73
CLDND1-227ENST00000513452 CEP63Q96MT8 703 aa10.52□□□□□ -0.73
CLDND1-227ENST00000513452 DPYSL5Q9BPU6 564 aa10.52□□□□□ -0.73
CLDND1-227ENST00000513452 GSDMCQ9BYG8 508 aa10.52□□□□□ -0.73
CLDND1-227ENST00000513452 MAGEH1Q9H213 219 aa10.52□□□□□ -0.73
CLDND1-227ENST00000513452 TRIT1Q9H3H1 467 aaKnown RBP10.52□□□□□ -0.73
CLDND1-227ENST00000513452 ZNF768Q9H5H4 540 aaKnown RBP10.52□□□□□ -0.73
CLDND1-227ENST00000513452 APMAPQ9HDC9 416 aa10.52□□□□□ -0.73
CLDND1-227ENST00000513452 PLCB1Q9NQ66 1216 aa10.52□□□□□ -0.73
CLDND1-227ENST00000513452 TLK1Q9UKI8 766 aa10.52□□□□□ -0.73
CLDND1-227ENST00000513452 ATP8A1Q9Y2Q0 1164 aa10.52□□□□□ -0.73
CLDND1-227ENST00000513452 MFHAS1Q9Y4C4 1052 aa10.52□□□□□ -0.73
CLDND1-227ENST00000513452 TMEM184BQ9Y519 407 aaPredicted RBP10.52□□□□□ -0.73
CLDND1-227ENST00000513452 PCDHB3Q9Y5E6 796 aa10.52□□□□□ -0.73
CLDND1-227ENST00000513452 OAS3Q9Y6K5 1087 aaKnown RBP10.52□□□□□ -0.73
CLDND1-227ENST00000513452 RPS6KL1Q9Y6S9 549 aa10.52□□□□□ -0.73
CLDND1-227ENST00000513452 ZNF106Q9H2Y7 1883 aaKnown RBP10.52□□□□□ -0.73
CLDND1-227ENST00000513452 CSMD1Q96PZ7 3565 aa10.51□□□□□ -0.73
CLDND1-227ENST00000513452 TSPAN11A1L157 253 aa10.51□□□□□ -0.73
CLDND1-227ENST00000513452 A8MU76 341 aa10.51□□□□□ -0.73
CLDND1-227ENST00000513452 PPM1DO15297 605 aa10.51□□□□□ -0.73
CLDND1-227ENST00000513452 TEX33O43247 280 aa10.51□□□□□ -0.73
CLDND1-227ENST00000513452 KDELR3O43731 214 aa10.51□□□□□ -0.73
CLDND1-227ENST00000513452 ZNF202O95125 648 aa10.51□□□□□ -0.73
CLDND1-227ENST00000513452 DLGAP3O95886 979 aa10.51□□□□□ -0.73
CLDND1-227ENST00000513452 FURINP09958 794 aa10.51□□□□□ -0.73
CLDND1-227ENST00000513452 BMP6P22004 513 aa10.51□□□□□ -0.73
CLDND1-227ENST00000513452 F8A1P23610 371 aa10.51□□□□□ -0.73
CLDND1-227ENST00000513452 FLT3P36888 993 aa10.51□□□□□ -0.73
CLDND1-227ENST00000513452 STAT1P42224 750 aa10.51□□□□□ -0.73
CLDND1-227ENST00000513452 NOP2P46087 812 aaKnown RBP10.51□□□□□ -0.73
CLDND1-227ENST00000513452 GNPDA1P46926 289 aa10.51□□□□□ -0.73
CLDND1-227ENST00000513452 PMS2P54278 862 aa10.51□□□□□ -0.73
CLDND1-227ENST00000513452 MC2RQ01718 297 aa10.51□□□□□ -0.73
CLDND1-227ENST00000513452 MRPL49Q13405 166 aaKnown RBP10.51□□□□□ -0.73
CLDND1-227ENST00000513452 SQSTM1Q13501 440 aa10.51□□□□□ -0.73
CLDND1-227ENST00000513452 ERV3-1Q14264 604 aa10.51□□□□□ -0.73
CLDND1-227ENST00000513452 EIF2S3LQ2VIR3 472 aaKnown RBP10.51□□□□□ -0.73
CLDND1-227ENST00000513452 MANEALQ5VSG8 457 aa10.51□□□□□ -0.73
CLDND1-227ENST00000513452 ENOSF1Q7L5Y1 443 aa10.51□□□□□ -0.73
CLDND1-227ENST00000513452 NLRP14Q86W24 1093 aa10.51□□□□□ -0.73
CLDND1-227ENST00000513452 ZNF761Q86XN6 746 aaPredicted RBP10.51□□□□□ -0.73
CLDND1-227ENST00000513452 ZDHHC17Q8IUH5 632 aa10.51□□□□□ -0.73
CLDND1-227ENST00000513452 NAGSQ8N159 534 aa10.51□□□□□ -0.73
CLDND1-227ENST00000513452 PELI3Q8N2H9 469 aa10.51□□□□□ -0.73
CLDND1-227ENST00000513452 CFAP57Q96MR6 1250 aa10.51□□□□□ -0.73
CLDND1-227ENST00000513452 TMEM248Q9NWD8 314 aa10.51□□□□□ -0.73
CLDND1-227ENST00000513452 POLHQ9Y253 713 aa10.51□□□□□ -0.73
CLDND1-227ENST00000513452 ARHGEF17Q96PE2 2063 aaPredicted RBP10.5□□□□□ -0.73
CLDND1-227ENST00000513452 CDC14CA4D256 554 aa10.5□□□□□ -0.73
CLDND1-227ENST00000513452 ZSCAN5CA6NGD5 496 aaPredicted RBP10.5□□□□□ -0.73
CLDND1-227ENST00000513452 PSMA7O14818 248 aa10.5□□□□□ -0.73
CLDND1-227ENST00000513452 DNAJB5O75953 348 aa10.5□□□□□ -0.73
CLDND1-227ENST00000513452 HOXC4P09017 264 aaPredicted RBP10.5□□□□□ -0.73
CLDND1-227ENST00000513452 ELFN1P0C7U0 828 aa10.5□□□□□ -0.73
CLDND1-227ENST00000513452 MYCLP1P12525 358 aaPredicted RBP10.5□□□□□ -0.73
CLDND1-227ENST00000513452 RHOQP17081 205 aa10.5□□□□□ -0.73
CLDND1-227ENST00000513452 KRT9P35527 623 aa10.5□□□□□ -0.73
CLDND1-227ENST00000513452 DLSTP36957 453 aa10.5□□□□□ -0.73
CLDND1-227ENST00000513452 APBA1Q02410 837 aa10.5□□□□□ -0.73
CLDND1-227ENST00000513452 RALGDSQ12967 914 aa10.5□□□□□ -0.73
CLDND1-227ENST00000513452 NADK2Q4G0N4 442 aa10.5□□□□□ -0.73
CLDND1-227ENST00000513452 PRR30Q53SZ7 412 aaPredicted RBP10.5□□□□□ -0.73
CLDND1-227ENST00000513452 C1QL3Q5VWW1 255 aa10.5□□□□□ -0.73
CLDND1-227ENST00000513452 CRYBG3Q68DQ2 2970 aa10.5□□□□□ -0.73
CLDND1-227ENST00000513452 TRNP1Q6NT89 227 aa10.5□□□□□ -0.73
CLDND1-227ENST00000513452 ZSWIM9Q86XI8 627 aa10.5□□□□□ -0.73
CLDND1-227ENST00000513452 ESX1Q8N693 406 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms