RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 IGSF21Q96ID5 467 aa5.44□□□□□ -1.54
CHD1-209ENST00000512844 METTL2AQ96IZ6 378 aaKnown RBP5.44□□□□□ -1.54
CHD1-209ENST00000512844 HARBI1Q96MB7 349 aa5.44□□□□□ -1.54
CHD1-209ENST00000512844 SLITRK1Q96PX8 696 aa5.44□□□□□ -1.54
CHD1-209ENST00000512844 AGXT2Q9BYV1 514 aa5.44□□□□□ -1.54
CHD1-209ENST00000512844 IFIH1Q9BYX4 1025 aaKnown RBP5.44□□□□□ -1.54
CHD1-209ENST00000512844 CNGB3Q9NQW8 809 aa5.44□□□□□ -1.54
CHD1-209ENST00000512844 GTPBP1O00178 669 aaKnown RBP5.43□□□□□ -1.54
CHD1-209ENST00000512844 LDLRAD4O15165 306 aa5.43□□□□□ -1.54
CHD1-209ENST00000512844 RTN3O95197 1032 aaPredicted RBP5.43□□□□□ -1.54
CHD1-209ENST00000512844 ZBTB11O95625 1053 aaPredicted RBP5.43□□□□□ -1.54
CHD1-209ENST00000512844 UBL4AP11441 157 aa5.43□□□□□ -1.54
CHD1-209ENST00000512844 ITGAXP20702 1163 aa5.43□□□□□ -1.54
CHD1-209ENST00000512844 RRM1P23921 792 aa5.43□□□□□ -1.54
CHD1-209ENST00000512844 EPHA8P29322 1005 aaPredicted RBP5.43□□□□□ -1.54
CHD1-209ENST00000512844 GAS1P54826 345 aa5.43□□□□□ -1.54
CHD1-209ENST00000512844 RPL7AP62424 266 aaKnown RBP5.43□□□□□ -1.54
CHD1-209ENST00000512844 BNC1Q01954 994 aa5.43□□□□□ -1.54
CHD1-209ENST00000512844 TRAF3Q13114 568 aa5.43□□□□□ -1.54
CHD1-209ENST00000512844 DCTN2Q13561 401 aaKnown RBP5.43□□□□□ -1.54
CHD1-209ENST00000512844 DRAP1Q14919 205 aaPredicted RBP5.43□□□□□ -1.54
CHD1-209ENST00000512844 SF3B4Q15427 424 aaKnown RBP eCLIP5.43□□□□□ -1.543e-10■■■■□ 19.3
CHD1-209ENST00000512844 CCNG2Q16589 344 aa5.43□□□□□ -1.54
CHD1-209ENST00000512844 DPCR1Q3MIW9 517 aa5.43□□□□□ -1.54
CHD1-209ENST00000512844 GGNBP1Q5YKI7 109 aa5.43□□□□□ -1.54
CHD1-209ENST00000512844 RHBDF2Q6PJF5 856 aa5.43□□□□□ -1.54
CHD1-209ENST00000512844 B3GNT6Q6ZMB0 384 aa5.43□□□□□ -1.54
CHD1-209ENST00000512844 BHLHA9Q7RTU4 235 aa5.43□□□□□ -1.54
CHD1-209ENST00000512844 CPLX4Q7Z7G2 160 aa5.43□□□□□ -1.54
CHD1-209ENST00000512844 SLC35F3Q8IY50 421 aa5.43□□□□□ -1.54
CHD1-209ENST00000512844 CNTROBQ8N137 903 aa5.43□□□□□ -1.54
CHD1-209ENST00000512844 KCNH5Q8NCM2 988 aa5.43□□□□□ -1.54
CHD1-209ENST00000512844 ETNPPLQ8TBG4 499 aa5.43□□□□□ -1.54
CHD1-209ENST00000512844 METTL6Q8TCB7 284 aa5.43□□□□□ -1.54
CHD1-209ENST00000512844 FAM149B1Q96BN6 582 aa5.43□□□□□ -1.54
CHD1-209ENST00000512844 NR1H4Q96RI1 486 aaPredicted RBP5.43□□□□□ -1.54
CHD1-209ENST00000512844 ASAH2Q9NR71 780 aa5.43□□□□□ -1.54
CHD1-209ENST00000512844 SLC6A13Q9NSD5 602 aa5.43□□□□□ -1.54
CHD1-209ENST00000512844 SLC9A2Q9UBY0 812 aa5.43□□□□□ -1.54
CHD1-209ENST00000512844 TTC7AQ9ULT0 858 aaPredicted RBP5.43□□□□□ -1.54
CHD1-209ENST00000512844 PROCRQ9UNN8 238 aa5.43□□□□□ -1.54
CHD1-209ENST00000512844 NAALADL1Q9UQQ1 740 aa5.43□□□□□ -1.54
CHD1-209ENST00000512844 CLEC18AA5D8T8 446 aa5.42□□□□□ -1.54
CHD1-209ENST00000512844 CLGNO14967 610 aa5.42□□□□□ -1.54
CHD1-209ENST00000512844 EPB41L2O43491 1005 aaKnown RBP5.42□□□□□ -1.54
CHD1-209ENST00000512844 SEC31AO94979 1220 aaKnown RBP5.42□□□□□ -1.54
CHD1-209ENST00000512844 ATP1A3P13637 1013 aa5.42□□□□□ -1.54
CHD1-209ENST00000512844 ZNF12P17014 697 aa5.42□□□□□ -1.54
CHD1-209ENST00000512844 SSTR2P30874 369 aa5.42□□□□□ -1.54
CHD1-209ENST00000512844 SHMT1P34896 483 aa5.42□□□□□ -1.54
CHD1-209ENST00000512844 CCR9P51686 369 aa5.42□□□□□ -1.54
CHD1-209ENST00000512844 KIF5AQ12840 1032 aa5.42□□□□□ -1.54
CHD1-209ENST00000512844 TNFAIP1Q13829 316 aa5.42□□□□□ -1.54
CHD1-209ENST00000512844 SLC45A4Q5BKX6 768 aa5.42□□□□□ -1.54
CHD1-209ENST00000512844 C6orf141Q5SZD1 244 aa5.42□□□□□ -1.54
CHD1-209ENST00000512844 KCTD18Q6PI47 426 aaPredicted RBP5.42□□□□□ -1.54
CHD1-209ENST00000512844 SPSB3Q6PJ21 355 aa5.42□□□□□ -1.54
CHD1-209ENST00000512844 FBXO46Q6PJ61 603 aaPredicted RBP5.42□□□□□ -1.54
CHD1-209ENST00000512844 TSSK4Q6SA08 328 aa5.42□□□□□ -1.54
CHD1-209ENST00000512844 SLC36A4Q6YBV0 504 aa5.42□□□□□ -1.54
CHD1-209ENST00000512844 CCNI2Q6ZMN8 369 aaPredicted RBP5.42□□□□□ -1.54
CHD1-209ENST00000512844 TAOK1Q7L7X3 1001 aa5.42□□□□□ -1.54
CHD1-209ENST00000512844 DIS3L2Q8IYB7 885 aaKnown RBP5.42□□□□□ -1.54
CHD1-209ENST00000512844 PGBD5Q8N414 524 aa5.42□□□□□ -1.54
CHD1-209ENST00000512844 CLEC18CQ8NCF0 446 aa5.42□□□□□ -1.54
CHD1-209ENST00000512844 MAGEC3Q8TD91 643 aa5.42□□□□□ -1.54
CHD1-209ENST00000512844 PABPC5Q96DU9 382 aaKnown RBP5.42□□□□□ -1.54
CHD1-209ENST00000512844 FAM84BQ96KN1 310 aaPredicted RBP5.42□□□□□ -1.54
CHD1-209ENST00000512844 ZNF385AQ96PM9 386 aaKnown RBP5.42□□□□□ -1.54
CHD1-209ENST00000512844 CTAGE1Q96RT6 745 aa5.42□□□□□ -1.54
CHD1-209ENST00000512844 SH3GL2Q99962 352 aa5.42□□□□□ -1.54
CHD1-209ENST00000512844 TMEM47Q9BQJ4 181 aa5.42□□□□□ -1.54
CHD1-209ENST00000512844 PLEKHA4Q9H4M7 779 aa5.42□□□□□ -1.54
CHD1-209ENST00000512844 RETREG1Q9H6L5 497 aa5.42□□□□□ -1.54
CHD1-209ENST00000512844 KIF9Q9HAQ2 790 aa5.42□□□□□ -1.54
CHD1-209ENST00000512844 BRF2Q9HAW0 419 aa5.42□□□□□ -1.54
CHD1-209ENST00000512844 PCDHB16Q9NRJ7 776 aa5.42□□□□□ -1.54
CHD1-209ENST00000512844 VDAC3Q9Y277 283 aa5.42□□□□□ -1.54
CHD1-209ENST00000512844 STON1Q9Y6Q2 735 aa5.42□□□□□ -1.54
CHD1-209ENST00000512844 SAA2-SAA4A0A096LPE2 208 aa5.41□□□□□ -1.54
CHD1-209ENST00000512844 CCNDBP1O95273 360 aa5.41□□□□□ -1.54
CHD1-209ENST00000512844 G6PDP11413 515 aa5.41□□□□□ -1.54
CHD1-209ENST00000512844 METAP2P50579 478 aaKnown RBP eCLIP5.41□□□□□ -1.54
CHD1-209ENST00000512844 POU3F1Q03052 451 aaPredicted RBP5.41□□□□□ -1.54
CHD1-209ENST00000512844 USP41Q3LFD5 358 aa5.41□□□□□ -1.54
CHD1-209ENST00000512844 SGO1Q5FBB7 561 aa5.41□□□□□ -1.54
CHD1-209ENST00000512844 WDR73Q6P4I2 378 aa5.41□□□□□ -1.54
CHD1-209ENST00000512844 RFFLQ8WZ73 363 aa5.41□□□□□ -1.54
CHD1-209ENST00000512844 C3orf30Q96M34 536 aa5.41□□□□□ -1.54
CHD1-209ENST00000512844 C1QTNF4Q9BXJ3 329 aa5.41□□□□□ -1.54
CHD1-209ENST00000512844 HINT3Q9NQE9 182 aaKnown RBP5.41□□□□□ -1.54
CHD1-209ENST00000512844 DDX4Q9NQI0 724 aaKnown RBP5.41□□□□□ -1.54
CHD1-209ENST00000512844 SMARCAL1Q9NZC9 954 aa5.41□□□□□ -1.54
CHD1-209ENST00000512844 DLGAP2Q9P1A6 1054 aa5.41□□□□□ -1.54
CHD1-209ENST00000512844 PRSS44E7EML9 344 aa5.4□□□□□ -1.54
CHD1-209ENST00000512844 J3KRW8 73 aa5.4□□□□□ -1.54
CHD1-209ENST00000512844 TAF4O00268 1085 aa5.4□□□□□ -1.54
CHD1-209ENST00000512844 SOCS6O14544 535 aa5.4□□□□□ -1.54
CHD1-209ENST00000512844 NDUFS7O75251 213 aa5.4□□□□□ -1.54
CHD1-209ENST00000512844 SRCP12931 536 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms