RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 CHKBQ9Y259 395 aa16.54■□□□□ 0.24
DDX41-213ENST00000512027 DUSP10Q9Y6W6 482 aa16.54■□□□□ 0.24
DDX41-213ENST00000512027 LY6G6EA0A0G2JKS1 128 aa16.53■□□□□ 0.24
DDX41-213ENST00000512027 ZNF487B1APH4 448 aa16.53■□□□□ 0.24
DDX41-213ENST00000512027 H3BM21 787 aa16.53■□□□□ 0.24
DDX41-213ENST00000512027 AQP9O43315 295 aa16.53■□□□□ 0.24
DDX41-213ENST00000512027 FZD6O60353 706 aa16.53■□□□□ 0.24
DDX41-213ENST00000512027 HEXIM1O94992 359 aaKnown RBP16.53■□□□□ 0.24
DDX41-213ENST00000512027 PROS1P07225 676 aa16.53■□□□□ 0.24
DDX41-213ENST00000512027 CKMT2P17540 419 aa16.53■□□□□ 0.24
DDX41-213ENST00000512027 CDKN2BP42772 138 aa16.53■□□□□ 0.24
DDX41-213ENST00000512027 DAB2P98082 770 aa16.53■□□□□ 0.24
DDX41-213ENST00000512027 PPIDQ08752 370 aaKnown RBP16.53■□□□□ 0.24
DDX41-213ENST00000512027 AP1B1Q10567 949 aa16.53■□□□□ 0.24
DDX41-213ENST00000512027 ZNF211Q13398 564 aaPredicted RBP16.53■□□□□ 0.24
DDX41-213ENST00000512027 PTK2BQ14289 1009 aa16.53■□□□□ 0.24
DDX41-213ENST00000512027 NFATC4Q14934 902 aa16.53■□□□□ 0.24
DDX41-213ENST00000512027 ALG11Q2TAA5 492 aa16.53■□□□□ 0.24
DDX41-213ENST00000512027 ODF2Q5BJF6 829 aa16.53■□□□□ 0.24
DDX41-213ENST00000512027 PRRT3Q5FWE3 981 aa16.53■□□□□ 0.24
DDX41-213ENST00000512027 RALGPS1Q5JS13 557 aa16.53■□□□□ 0.24
DDX41-213ENST00000512027 ALG1LQ6GMV1 187 aa16.53■□□□□ 0.24
DDX41-213ENST00000512027 CCNI2Q6ZMN8 369 aaPredicted RBP16.53■□□□□ 0.24
DDX41-213ENST00000512027 RFLNAQ6ZTI6 216 aa16.53■□□□□ 0.24
DDX41-213ENST00000512027 RD3Q7Z3Z2 195 aa16.53■□□□□ 0.24
DDX41-213ENST00000512027 HSD11B1LQ7Z5J1 315 aa16.53■□□□□ 0.24
DDX41-213ENST00000512027 HID1Q8IV36 788 aa16.53■□□□□ 0.24
DDX41-213ENST00000512027 CNTD1Q8N815 330 aa16.53■□□□□ 0.24
DDX41-213ENST00000512027 SPOCK2Q92563 424 aa16.53■□□□□ 0.24
DDX41-213ENST00000512027 KRT35Q92764 455 aa16.53■□□□□ 0.24
DDX41-213ENST00000512027 APOLD1Q96LR9 279 aa16.53■□□□□ 0.24
DDX41-213ENST00000512027 COQ10AQ96MF6 247 aa16.53■□□□□ 0.24
DDX41-213ENST00000512027 OLFM3Q96PB7 478 aa16.53■□□□□ 0.24
DDX41-213ENST00000512027 MAK16Q9BXY0 300 aaKnown RBP16.53■□□□□ 0.24
DDX41-213ENST00000512027 CLPBQ9H078 707 aa16.53■□□□□ 0.24
DDX41-213ENST00000512027 NLGN3Q9NZ94 848 aa16.53■□□□□ 0.24
DDX41-213ENST00000512027 SEPT10Q9P0V9 454 aa16.53■□□□□ 0.24
DDX41-213ENST00000512027 PHTF1Q9UMS5 762 aa16.53■□□□□ 0.24
DDX41-213ENST00000512027 U3KQA8 63 aa16.53■□□□□ 0.24
DDX41-213ENST00000512027 DMXL2Q8TDJ6 3036 aa16.53■□□□□ 0.24
DDX41-213ENST00000512027 A0A0U1RQJ8 604 aa16.52■□□□□ 0.24
DDX41-213ENST00000512027 CFAP69A5D8W1 941 aa16.52■□□□□ 0.24
DDX41-213ENST00000512027 PSTPIP1O43586 416 aa16.52■□□□□ 0.24
DDX41-213ENST00000512027 MMP2P08253 660 aa16.52■□□□□ 0.24
DDX41-213ENST00000512027 PECAM1P16284 738 aaPredicted RBP16.52■□□□□ 0.24
DDX41-213ENST00000512027 HNF1BP35680 557 aa16.52■□□□□ 0.24
DDX41-213ENST00000512027 ETV3P41162 512 aa16.52■□□□□ 0.24
DDX41-213ENST00000512027 MTM1Q13496 603 aa16.52■□□□□ 0.24
DDX41-213ENST00000512027 SMAD1Q15797 465 aaKnown RBP16.52■□□□□ 0.24
DDX41-213ENST00000512027 FAXCQ5TGI0 409 aa16.52■□□□□ 0.24
DDX41-213ENST00000512027 ENPP7Q6UWV6 458 aa16.52■□□□□ 0.24
DDX41-213ENST00000512027 SPOCD1Q6ZMY3 1216 aa16.52■□□□□ 0.24
DDX41-213ENST00000512027 DAAM2Q86T65 1068 aa16.52■□□□□ 0.24
DDX41-213ENST00000512027 TMTC1Q8IUR5 882 aa16.52■□□□□ 0.24
DDX41-213ENST00000512027 TMEM139Q8IV31 216 aa16.52■□□□□ 0.24
DDX41-213ENST00000512027 TPCN2Q8NHX9 752 aa16.52■□□□□ 0.24
DDX41-213ENST00000512027 FATE1Q969F0 183 aa16.52■□□□□ 0.24
DDX41-213ENST00000512027 HAUS1Q96CS2 278 aa16.52■□□□□ 0.24
DDX41-213ENST00000512027 NUS1Q96E22 293 aa16.52■□□□□ 0.24
DDX41-213ENST00000512027 PDXPQ96GD0 296 aa16.52■□□□□ 0.24
DDX41-213ENST00000512027 MCCC1Q96RQ3 725 aaPredicted RBP16.52■□□□□ 0.24
DDX41-213ENST00000512027 IL12RB2Q99665 862 aa16.52■□□□□ 0.24
DDX41-213ENST00000512027 LGR4Q9BXB1 951 aa16.52■□□□□ 0.24
DDX41-213ENST00000512027 TDRD1Q9BXT4 1180 aaKnown RBP16.52■□□□□ 0.24
DDX41-213ENST00000512027 LACRTQ9GZZ8 138 aa16.52■□□□□ 0.24
DDX41-213ENST00000512027 CD84Q9UIB8 345 aa16.52■□□□□ 0.24
DDX41-213ENST00000512027 CACNA1BQ00975 2339 aa16.52■□□□□ 0.23
DDX41-213ENST00000512027 A0A0A6YYK5 440 aaPredicted RBP16.51■□□□□ 0.23
DDX41-213ENST00000512027 A0A1W2PQ67 120 aa16.51■□□□□ 0.23
DDX41-213ENST00000512027 TMEM202A6NGA9 273 aa16.51■□□□□ 0.23
DDX41-213ENST00000512027 PRLP01236 227 aa16.51■□□□□ 0.23
DDX41-213ENST00000512027 ALPPL2P10696 532 aa16.51■□□□□ 0.23
DDX41-213ENST00000512027 CYP2A6P11509 494 aaPredicted RBP16.51■□□□□ 0.23
DDX41-213ENST00000512027 TSHRP16473 764 aa16.51■□□□□ 0.23
DDX41-213ENST00000512027 CD86P42081 329 aa16.51■□□□□ 0.23
DDX41-213ENST00000512027 IFI35P80217 286 aaPredicted RBP16.51■□□□□ 0.23
DDX41-213ENST00000512027 PPARDQ03181 441 aa16.51■□□□□ 0.23
DDX41-213ENST00000512027 HS1BP3Q53T59 392 aa16.51■□□□□ 0.23
DDX41-213ENST00000512027 C11orf63Q6NUN7 778 aa16.51■□□□□ 0.23
DDX41-213ENST00000512027 CRTC1Q6UUV9 634 aa16.51■□□□□ 0.23
DDX41-213ENST00000512027 Q6ZVL8 140 aa16.51■□□□□ 0.23
DDX41-213ENST00000512027 VSIG1Q86XK7 387 aa16.51■□□□□ 0.23
DDX41-213ENST00000512027 LPCAT1Q8NF37 534 aa16.51■□□□□ 0.23
DDX41-213ENST00000512027 SCRN2Q96FV2 425 aa16.51■□□□□ 0.23
DDX41-213ENST00000512027 SLC13A1Q9BZW2 595 aa16.51■□□□□ 0.23
DDX41-213ENST00000512027 FGF22Q9HCT0 170 aa16.51■□□□□ 0.23
DDX41-213ENST00000512027 MRPL40Q9NQ50 206 aaKnown RBP16.51■□□□□ 0.23
DDX41-213ENST00000512027 SPASTQ9UBP0 616 aa16.51■□□□□ 0.23
DDX41-213ENST00000512027 KLQ9UEF7 1012 aa16.51■□□□□ 0.23
DDX41-213ENST00000512027 PCDHGA1Q9Y5H4 931 aa16.51■□□□□ 0.23
DDX41-213ENST00000512027 COL27A1Q8IZC6 1860 aaPredicted RBP16.5■□□□□ 0.23
DDX41-213ENST00000512027 A0A0J9YYE9 177 aa16.5■□□□□ 0.23
DDX41-213ENST00000512027 GOLGA6CA6NDK9 693 aa16.5■□□□□ 0.23
DDX41-213ENST00000512027 GOLGA6BA6NDN3 693 aa16.5■□□□□ 0.23
DDX41-213ENST00000512027 NEMP2A6NFY4 417 aa16.5■□□□□ 0.23
DDX41-213ENST00000512027 TOR1BO14657 336 aa16.5■□□□□ 0.23
DDX41-213ENST00000512027 CST8O60676 142 aa16.5■□□□□ 0.23
DDX41-213ENST00000512027 TRBC1P01850 177 aa16.5■□□□□ 0.23
DDX41-213ENST00000512027 GOLGA6DP0CG33 693 aa16.5■□□□□ 0.23
DDX41-213ENST00000512027 ACP1P24666 158 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms