RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 IRF3Q14653 427 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 KYAT1Q16773 422 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 C9orf152Q5JTZ5 239 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 ZNF658Q5TYW1 1059 aaPredicted RBP5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 EEF1A1P5Q5VTE0 462 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 KRT80Q6KB66 452 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 FBXO46Q6PJ61 603 aaPredicted RBP5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 LINC00696Q6ZRV3 163 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 CHSY3Q70JA7 882 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 EFL1Q7Z2Z2 1120 aaKnown RBP5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 CAMK1DQ8IU85 385 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 CCDC117Q8IWD4 279 aaPredicted RBP5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 SCAMP5Q8TAC9 235 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 CPT1CQ8TCG5 803 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 SOCS4Q8WXH5 440 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 MRPL38Q96DV4 380 aaKnown RBP5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 SPDL1Q96EA4 605 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 HMCESQ96FZ2 354 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 ZNF274Q96GC6 653 aaPredicted RBP5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 KCNK16Q96T55 309 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 TRIM54Q9BYV2 358 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 RAB33BQ9H082 229 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 RNF208Q9H0X6 261 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 MUC13Q9H3R2 512 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 CENPHQ9H3R5 247 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 TMEM140Q9NV12 185 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 TBC1D13Q9NVG8 400 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 COL20A1Q9P218 1284 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 UXTQ9UBK9 157 aaPredicted RBP5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 KCNJ14Q9UNX9 436 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 RNF24Q9Y225 148 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 FNDC3AQ9Y2H6 1198 aaKnown RBP5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 LYVE1Q9Y5Y7 322 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 ASTN1O14525 1302 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 KIAA0100Q14667 2235 aaKnown RBP5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 PARP14Q460N5 1801 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 SOWAHBA6NEL2 793 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 CCDC154A6NI56 674 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 OGTO15294 1046 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 EIF3DO15371 548 aaKnown RBP eCLIP5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 CTAG2O75638 210 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 CTDNEP1O95476 244 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 FTLP02792 175 aaPredicted RBP5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 ITGA2BP08514 1039 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 ADRA1DP25100 572 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 CCND3P30281 292 aaPredicted RBP5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 GRIA4P48058 902 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 ACTR2P61160 394 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 RNF4P78317 190 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 RPL6Q02878 288 aaKnown RBP5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 CYP4F3Q08477 520 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 FAAP100Q0VG06 881 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 DUSP4Q13115 394 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 CALCOCO2Q13137 446 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 PLA1AQ53H76 456 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 C4orf48Q5BLP8 95 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 C3orf38Q5JPI3 329 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 TMEM63BQ5T3F8 832 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 RIPPLY2Q5TAB7 128 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 ARHGEF16Q5VV41 709 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 SCYL2Q6P3W7 929 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 CYB5D1Q6P9G0 228 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 FOXR1Q6PIV2 292 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 CCDC121Q6ZUS5 278 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 ADAT2Q7Z6V5 191 aaKnown RBP5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 FJX1Q86VR8 437 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 FBXO16Q8IX29 292 aaPredicted RBP5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 NELFCDQ8IXH7 590 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 CSGALNACT2Q8N6G5 542 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 TRPV1Q8NER1 839 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 GPR156Q8NFN8 814 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 IRGQQ8WZA9 623 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 GRAMD1AQ96CP6 724 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 CHMP6Q96FZ7 201 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 PGM2Q96G03 612 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 ABHD8Q96I13 439 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 DEFB118Q96PH6 123 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 TAAR1Q96RJ0 339 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 PRPF18Q99633 342 aaKnown RBP5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 SEMA3CQ99985 751 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 REEP2Q9BRK0 252 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 HEMGNQ9BXL5 484 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 CYP3A43Q9HB55 503 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 ZDHHC7Q9NXF8 308 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 PAQR5Q9NXK6 330 aaPredicted RBP5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 PKD2L1Q9P0L9 805 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 ADAMTS6Q9UKP5 1117 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 MTMR6Q9Y217 621 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 PMF1-BGLAPU3KQ54 211 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 ATXN2Q99700 1313 aaKnown RBP5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 TNRC18O15417 2968 aaPredicted RBP5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 A0A0G2JMZ2 1700 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 TMEM247A6NEH6 219 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 SMCO2A6NFE2 343 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 H3BQV1 296 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 ERVH48-1M5A8F1 160 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 ANGPT2O15123 496 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms