RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 Q8N9G6 341 aaPredicted RBP15.44■□□□□ 0.06
TPM3-219ENST00000509409 CCDC97Q96F63 343 aaPredicted RBP15.44■□□□□ 0.06
TPM3-219ENST00000509409 PDXPQ96GD0 296 aa15.44■□□□□ 0.06
TPM3-219ENST00000509409 RBM15Q96T37 977 aaKnown RBP eCLIP15.44■□□□□ 0.06
TPM3-219ENST00000509409 ISCUQ9H1K1 167 aa15.44■□□□□ 0.06
TPM3-219ENST00000509409 CPNE5Q9HCH3 593 aa15.44■□□□□ 0.06
TPM3-219ENST00000509409 EPB41L5Q9HCM4 733 aa15.44■□□□□ 0.06
TPM3-219ENST00000509409 MRPL40Q9NQ50 206 aaKnown RBP15.44■□□□□ 0.06
TPM3-219ENST00000509409 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.44■□□□□ 0.06
TPM3-219ENST00000509409 ETNK2Q9NVF9 386 aa15.44■□□□□ 0.06
TPM3-219ENST00000509409 B4GALT6Q9UBX8 382 aa15.44■□□□□ 0.06
TPM3-219ENST00000509409 PCDHGA8Q9Y5G5 932 aa15.44■□□□□ 0.06
TPM3-219ENST00000509409 DGKBQ9Y6T7 804 aa15.44■□□□□ 0.06
TPM3-219ENST00000509409 FASNP49327 2511 aaKnown RBP15.43■□□□□ 0.06
TPM3-219ENST00000509409 A0A1W2PNU3 283 aaPredicted RBP15.43■□□□□ 0.06
TPM3-219ENST00000509409 A0A1W2PQ67 120 aa15.43■□□□□ 0.06
TPM3-219ENST00000509409 TMX2-CTNND1H3BSU7 103 aa15.43■□□□□ 0.06
TPM3-219ENST00000509409 PDE2AO00408 941 aaPredicted RBP15.43■□□□□ 0.06
TPM3-219ENST00000509409 NTN3O00634 580 aaPredicted RBP15.43■□□□□ 0.06
TPM3-219ENST00000509409 RPLP0P05388 317 aaKnown RBP15.43■□□□□ 0.06
TPM3-219ENST00000509409 HOXC4P09017 264 aaPredicted RBP15.43■□□□□ 0.06
TPM3-219ENST00000509409 RARAP10276 462 aa15.43■□□□□ 0.06
TPM3-219ENST00000509409 PIGHQ14442 188 aaPredicted RBP15.43■□□□□ 0.06
TPM3-219ENST00000509409 KRT81Q14533 505 aa15.43■□□□□ 0.06
TPM3-219ENST00000509409 DPYSL2Q16555 572 aa15.43■□□□□ 0.06
TPM3-219ENST00000509409 TAF1BQ53T94 588 aaPredicted RBP15.43■□□□□ 0.06
TPM3-219ENST00000509409 PNCKQ6P2M8 343 aa15.43■□□□□ 0.06
TPM3-219ENST00000509409 IGF2-ASQ6U949 168 aa15.43■□□□□ 0.06
TPM3-219ENST00000509409 FBXO39Q8N4B4 442 aa15.43■□□□□ 0.06
TPM3-219ENST00000509409 CPLX3Q8WVH0 158 aa15.43■□□□□ 0.06
TPM3-219ENST00000509409 PRR11Q96HE9 360 aaPredicted RBP15.43■□□□□ 0.06
TPM3-219ENST00000509409 BTBD6Q96KE9 485 aa15.43■□□□□ 0.06
TPM3-219ENST00000509409 NSMCE3Q96MG7 304 aa15.43■□□□□ 0.06
TPM3-219ENST00000509409 STRADBQ9C0K7 418 aa15.43■□□□□ 0.06
TPM3-219ENST00000509409 LRRN3Q9H3W5 708 aa15.43■□□□□ 0.06
TPM3-219ENST00000509409 DPEP2Q9H4A9 486 aa15.43■□□□□ 0.06
TPM3-219ENST00000509409 WDR26Q9H7D7 661 aa15.43■□□□□ 0.06
TPM3-219ENST00000509409 SUDS3Q9H7L9 328 aaPredicted RBP15.43■□□□□ 0.06
TPM3-219ENST00000509409 CYP4F12Q9HCS2 524 aa15.43■□□□□ 0.06
TPM3-219ENST00000509409 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.43■□□□□ 0.06
TPM3-219ENST00000509409 RABGEF1Q9UJ41 708 aa15.43■□□□□ 0.06
TPM3-219ENST00000509409 BZW2Q9Y6E2 419 aaKnown RBP15.43■□□□□ 0.06
TPM3-219ENST00000509409 PMS2P1A4D2B8 440 aa15.42■□□□□ 0.06
TPM3-219ENST00000509409 GOLGA6CA6NDK9 693 aa15.42■□□□□ 0.06
TPM3-219ENST00000509409 GOLGA6BA6NDN3 693 aa15.42■□□□□ 0.06
TPM3-219ENST00000509409 B4DGG1 531 aa15.42■□□□□ 0.06
TPM3-219ENST00000509409 TNFRSF10CO14798 259 aa15.42■□□□□ 0.06
TPM3-219ENST00000509409 CPP00450 1065 aa15.42■□□□□ 0.06
TPM3-219ENST00000509409 GOLGA6DP0CG33 693 aa15.42■□□□□ 0.06
TPM3-219ENST00000509409 CYP2A6P11509 494 aaPredicted RBP15.42■□□□□ 0.06
TPM3-219ENST00000509409 TCF4P15884 667 aa15.42■□□□□ 0.06
TPM3-219ENST00000509409 VIPR1P32241 457 aa15.42■□□□□ 0.06
TPM3-219ENST00000509409 TRIM23P36406 574 aa15.42■□□□□ 0.06
TPM3-219ENST00000509409 HSPA9P38646 679 aaKnown RBP15.42■□□□□ 0.06
TPM3-219ENST00000509409 ITKQ08881 620 aa15.42■□□□□ 0.06
TPM3-219ENST00000509409 ARHGEF7Q14155 803 aa15.42■□□□□ 0.06
TPM3-219ENST00000509409 IQCB1Q15051 598 aa15.42■□□□□ 0.06
TPM3-219ENST00000509409 MARC1Q5VT66 337 aa15.42■□□□□ 0.06
TPM3-219ENST00000509409 KCTD16Q68DU8 428 aa15.42■□□□□ 0.06
TPM3-219ENST00000509409 ATPAF2Q8N5M1 289 aa15.42■□□□□ 0.06
TPM3-219ENST00000509409 LSM14AQ8ND56 463 aaKnown RBP15.42■□□□□ 0.06
TPM3-219ENST00000509409 NUS1Q96E22 293 aa15.42■□□□□ 0.06
TPM3-219ENST00000509409 CSPG4P5Q96PW8 444 aa15.42■□□□□ 0.06
TPM3-219ENST00000509409 NUDCD1Q96RS6 583 aa15.42■□□□□ 0.06
TPM3-219ENST00000509409 LGR4Q9BXB1 951 aa15.42■□□□□ 0.06
TPM3-219ENST00000509409 FOXP3Q9BZS1 431 aa15.42■□□□□ 0.06
TPM3-219ENST00000509409 TMEM168Q9H0V1 697 aa15.42■□□□□ 0.06
TPM3-219ENST00000509409 THAP2Q9H0W7 228 aa15.42■□□□□ 0.06
TPM3-219ENST00000509409 NOD2Q9HC29 1040 aa15.42■□□□□ 0.06
TPM3-219ENST00000509409 FGF22Q9HCT0 170 aa15.42■□□□□ 0.06
TPM3-219ENST00000509409 GOLGA6AQ9NYA3 693 aa15.42■□□□□ 0.06
TPM3-219ENST00000509409 IP6K2Q9UHH9 426 aa15.42■□□□□ 0.06
TPM3-219ENST00000509409 PHTF1Q9UMS5 762 aa15.42■□□□□ 0.06
TPM3-219ENST00000509409 HTRA2O43464 458 aaPredicted RBP15.41■□□□□ 0.06
TPM3-219ENST00000509409 MAFKO60675 156 aa15.41■□□□□ 0.06
TPM3-219ENST00000509409 SOCS5O75159 536 aa15.41■□□□□ 0.06
TPM3-219ENST00000509409 SERPINB6P35237 376 aa15.41■□□□□ 0.06
TPM3-219ENST00000509409 INHBCP55103 352 aa15.41■□□□□ 0.06
TPM3-219ENST00000509409 UBASH3AP57075 661 aa15.41■□□□□ 0.06
TPM3-219ENST00000509409 MAXP61244 160 aa15.41■□□□□ 0.06
TPM3-219ENST00000509409 FANCCQ00597 558 aa15.41■□□□□ 0.06
TPM3-219ENST00000509409 TSR1Q2NL82 804 aaKnown RBP15.41■□□□□ 0.06
TPM3-219ENST00000509409 FIGNQ5HY92 759 aa15.41■□□□□ 0.06
TPM3-219ENST00000509409 B3GNT8Q7Z7M8 397 aa15.41■□□□□ 0.06
TPM3-219ENST00000509409 JAMLQ86YT9 394 aa15.41■□□□□ 0.06
TPM3-219ENST00000509409 GPR156Q8NFN8 814 aa15.41■□□□□ 0.06
TPM3-219ENST00000509409 COQ10AQ96MF6 247 aa15.41■□□□□ 0.06
TPM3-219ENST00000509409 TMEM74Q96NL1 305 aa15.41■□□□□ 0.06
TPM3-219ENST00000509409 NUP85Q9BW27 656 aa15.41■□□□□ 0.06
TPM3-219ENST00000509409 CARS2Q9HA77 564 aaKnown RBP15.41■□□□□ 0.06
TPM3-219ENST00000509409 PCDH18Q9HCL0 1135 aa15.41■□□□□ 0.06
TPM3-219ENST00000509409 PHPT1Q9NRX4 125 aaPredicted RBP15.41■□□□□ 0.06
TPM3-219ENST00000509409 KCTD5Q9NXV2 234 aa15.41■□□□□ 0.06
TPM3-219ENST00000509409 LRIT1Q9P2V4 623 aa15.41■□□□□ 0.06
TPM3-219ENST00000509409 ANAPC7Q9UJX3 599 aa15.41■□□□□ 0.06
TPM3-219ENST00000509409 BPTFQ12830 3046 aa15.4■□□□□ 0.06
TPM3-219ENST00000509409 PRSS38A1L453 326 aa15.4■□□□□ 0.06
TPM3-219ENST00000509409 MYO1FO00160 1098 aa15.4■□□□□ 0.06
TPM3-219ENST00000509409 AGRPO00253 132 aa15.4■□□□□ 0.06
TPM3-219ENST00000509409 PLD2O14939 933 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms