RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 CABIN1Q9Y6J0 2220 aa8.79□□□□□ -1
PDLIM5-213ENST00000509357 POM121BA6NF01 834 aa8.79□□□□□ -1
PDLIM5-213ENST00000509357 NEMP2A6NFY4 417 aa8.79□□□□□ -1
PDLIM5-213ENST00000509357 F5H423 210 aaPredicted RBP8.79□□□□□ -1
PDLIM5-213ENST00000509357 H3BM21 787 aa8.79□□□□□ -1
PDLIM5-213ENST00000509357 AREL1O15033 823 aa8.79□□□□□ -1
PDLIM5-213ENST00000509357 RAD51BO15315 384 aa8.79□□□□□ -1
PDLIM5-213ENST00000509357 LZTS3O60299 673 aaPredicted RBP8.79□□□□□ -1
PDLIM5-213ENST00000509357 RFPL3O75679 317 aa8.79□□□□□ -1
PDLIM5-213ENST00000509357 JCHAINP01591 159 aa8.79□□□□□ -1
PDLIM5-213ENST00000509357 PROS1P07225 676 aa8.79□□□□□ -1
PDLIM5-213ENST00000509357 PDHA1P08559 390 aa8.79□□□□□ -1
PDLIM5-213ENST00000509357 ALPPL2P10696 532 aa8.79□□□□□ -1
PDLIM5-213ENST00000509357 ETS1P14921 441 aa8.79□□□□□ -1
PDLIM5-213ENST00000509357 GM2AP17900 193 aa8.79□□□□□ -1
PDLIM5-213ENST00000509357 CCNCP24863 283 aa8.79□□□□□ -1
PDLIM5-213ENST00000509357 MMP13P45452 471 aa8.79□□□□□ -1
PDLIM5-213ENST00000509357 CSNK1DP48730 415 aa8.79□□□□□ -1
PDLIM5-213ENST00000509357 POLR2LP62875 67 aaKnown RBP8.79□□□□□ -1
PDLIM5-213ENST00000509357 DAB2P98082 770 aa8.79□□□□□ -1
PDLIM5-213ENST00000509357 ITKQ08881 620 aa8.79□□□□□ -1
PDLIM5-213ENST00000509357 NSUN2Q08J23 767 aaKnown RBP eCLIP8.79□□□□□ -1
PDLIM5-213ENST00000509357 DNAJC3Q13217 504 aa8.79□□□□□ -1
PDLIM5-213ENST00000509357 PTK2BQ14289 1009 aa8.79□□□□□ -1
PDLIM5-213ENST00000509357 FGL2Q14314 439 aa8.79□□□□□ -1
PDLIM5-213ENST00000509357 OASLQ15646 514 aaKnown RBP8.79□□□□□ -1
PDLIM5-213ENST00000509357 UGP2Q16851 508 aa8.79□□□□□ -1
PDLIM5-213ENST00000509357 TTC27Q6P3X3 843 aa8.79□□□□□ -1
PDLIM5-213ENST00000509357 BRAT1Q6PJG6 821 aa8.79□□□□□ -1
PDLIM5-213ENST00000509357 DHRS13Q6UX07 377 aa8.79□□□□□ -1
PDLIM5-213ENST00000509357 KYAT3Q6YP21 454 aaKnown RBP8.79□□□□□ -1
PDLIM5-213ENST00000509357 PARGQ86W56 976 aa8.79□□□□□ -1
PDLIM5-213ENST00000509357 ZNF567Q8N184 647 aa8.79□□□□□ -1
PDLIM5-213ENST00000509357 GALNT15Q8N3T1 639 aa8.79□□□□□ -1
PDLIM5-213ENST00000509357 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.79□□□□□ -1
PDLIM5-213ENST00000509357 PRELID2Q8N945 189 aa8.79□□□□□ -1
PDLIM5-213ENST00000509357 DENND6BQ8NEG7 585 aa8.79□□□□□ -1
PDLIM5-213ENST00000509357 HCAR2Q8TDS4 363 aa8.79□□□□□ -1
PDLIM5-213ENST00000509357 PDCD6IPQ8WUM4 868 aaKnown RBP8.79□□□□□ -1
PDLIM5-213ENST00000509357 C1orf54Q8WWF1 131 aa8.79□□□□□ -1
PDLIM5-213ENST00000509357 ANP32BQ92688 251 aaKnown RBP8.79□□□□□ -1
PDLIM5-213ENST00000509357 ECHDC3Q96DC8 303 aa8.79□□□□□ -1
PDLIM5-213ENST00000509357 BMFQ96LC9 184 aa8.79□□□□□ -1
PDLIM5-213ENST00000509357 ZNF599Q96NL3 588 aa8.79□□□□□ -1
PDLIM5-213ENST00000509357 LENG8Q96PV6 779 aaPredicted RBP8.79□□□□□ -1
PDLIM5-213ENST00000509357 OSBPL9Q96SU4 736 aa8.79□□□□□ -1
PDLIM5-213ENST00000509357 CARD9Q9H257 536 aa8.79□□□□□ -1
PDLIM5-213ENST00000509357 PCDH12Q9NPG4 1184 aa8.79□□□□□ -1
PDLIM5-213ENST00000509357 SCUBE2Q9NQ36 999 aa8.79□□□□□ -1
PDLIM5-213ENST00000509357 WASF3Q9UPY6 502 aa8.79□□□□□ -1
PDLIM5-213ENST00000509357 TRPM6Q9BX84 2022 aa8.78□□□□□ -1
PDLIM5-213ENST00000509357 LRP4O75096 1905 aa8.78□□□□□ -1
PDLIM5-213ENST00000509357 SPTY2D1-AS1A0A0U1RR47 76 aa8.78□□□□□ -1
PDLIM5-213ENST00000509357 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.78□□□□□ -1
PDLIM5-213ENST00000509357 TSPAN11A1L157 253 aa8.78□□□□□ -1
PDLIM5-213ENST00000509357 A8MX80 341 aa8.78□□□□□ -1
PDLIM5-213ENST00000509357 ZSCAN12O43309 604 aa8.78□□□□□ -1
PDLIM5-213ENST00000509357 HTRA2O43464 458 aaPredicted RBP8.78□□□□□ -1
PDLIM5-213ENST00000509357 SIGLEC6O43699 453 aa8.78□□□□□ -1
PDLIM5-213ENST00000509357 FZD6O60353 706 aa8.78□□□□□ -1
PDLIM5-213ENST00000509357 MT-CYBP00156 380 aaPredicted RBP8.78□□□□□ -1
PDLIM5-213ENST00000509357 CCNB1P14635 433 aa8.78□□□□□ -1
PDLIM5-213ENST00000509357 JUPP14923 745 aa8.78□□□□□ -1
PDLIM5-213ENST00000509357 JUNDP17535 347 aa8.78□□□□□ -1
PDLIM5-213ENST00000509357 CKMT2P17540 419 aa8.78□□□□□ -1
PDLIM5-213ENST00000509357 DGKAP23743 735 aa8.78□□□□□ -1
PDLIM5-213ENST00000509357 NFKBIAP25963 317 aa8.78□□□□□ -1
PDLIM5-213ENST00000509357 NR2C2P49116 596 aa8.78□□□□□ -1
PDLIM5-213ENST00000509357 AP1S1P61966 158 aa8.78□□□□□ -1
PDLIM5-213ENST00000509357 HNRNPKP61978 463 aaKnown RBP eCLIP8.78□□□□□ -1
PDLIM5-213ENST00000509357 SKOR1P84550 965 aa8.78□□□□□ -1
PDLIM5-213ENST00000509357 AP1B1Q10567 949 aa8.78□□□□□ -1
PDLIM5-213ENST00000509357 RALGDSQ12967 914 aa8.78□□□□□ -1
PDLIM5-213ENST00000509357 TFDP2Q14188 446 aa8.78□□□□□ -1
PDLIM5-213ENST00000509357 LRRC14Q15048 493 aa8.78□□□□□ -1
PDLIM5-213ENST00000509357 TMEM52BQ4KMG9 183 aa8.78□□□□□ -1
PDLIM5-213ENST00000509357 FAXCQ5TGI0 409 aa8.78□□□□□ -1
PDLIM5-213ENST00000509357 MARC1Q5VT66 337 aa8.78□□□□□ -1
PDLIM5-213ENST00000509357 SLC22A18ASQ8N1D0 253 aa8.78□□□□□ -1
PDLIM5-213ENST00000509357 TXLNBQ8N3L3 684 aa8.78□□□□□ -1
PDLIM5-213ENST00000509357 UBL4BQ8N7F7 174 aa8.78□□□□□ -1
PDLIM5-213ENST00000509357 SPATA22Q8NHS9 363 aa8.78□□□□□ -1
PDLIM5-213ENST00000509357 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.78□□□□□ -1
PDLIM5-213ENST00000509357 LMX1AQ8TE12 382 aa8.78□□□□□ -1
PDLIM5-213ENST00000509357 ASB12Q8WXK4 309 aa8.78□□□□□ -1
PDLIM5-213ENST00000509357 ZCCHC14Q8WYQ9 949 aaKnown RBP8.78□□□□□ -1
PDLIM5-213ENST00000509357 OXNAD1Q96HP4 312 aaPredicted RBP8.78□□□□□ -1
PDLIM5-213ENST00000509357 ALS2CR12Q96Q35 445 aa8.78□□□□□ -1
PDLIM5-213ENST00000509357 MLPHQ9BV36 600 aaPredicted RBP8.78□□□□□ -1
PDLIM5-213ENST00000509357 EVA1BQ9NVM1 165 aa8.78□□□□□ -1
PDLIM5-213ENST00000509357 RBM22Q9NW64 420 aaKnown RBP eCLIP8.78□□□□□ -1
PDLIM5-213ENST00000509357 UCKL1Q9NWZ5 548 aa8.78□□□□□ -1
PDLIM5-213ENST00000509357 TOR4AQ9NXH8 423 aa8.78□□□□□ -1
PDLIM5-213ENST00000509357 SNX12Q9UMY4 172 aa8.78□□□□□ -1
PDLIM5-213ENST00000509357 COQ6Q9Y2Z9 468 aa8.78□□□□□ -1
PDLIM5-213ENST00000509357 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.78□□□□□ -1
PDLIM5-213ENST00000509357 JRKLQ9Y4A0 524 aa8.78□□□□□ -1
PDLIM5-213ENST00000509357 TTLL3Q9Y4R7 772 aa8.78□□□□□ -1
PDLIM5-213ENST00000509357 PCDHGC4Q9Y5F7 938 aa8.78□□□□□ -1
PDLIM5-213ENST00000509357 ZNF106Q9H2Y7 1883 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms