RNA–Protein interactions for RNA: ENST00000508559.1

BRCC3P1-201, Transcript of BRCA1/BRCA2-containing complex subunit 3 pseudogene 1, humanhuman

BASIC

Gene BRCC3P1, Length 951 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P1-201ENST00000508559 TBC1D3IA0A087WXS9 549 aa11.05□□□□□ -0.64
BRCC3P1-201ENST00000508559 TBC1D3EA0A087X179 549 aa11.05□□□□□ -0.64
BRCC3P1-201ENST00000508559 TBC1D3KA0A087X1G2 549 aa11.05□□□□□ -0.64
BRCC3P1-201ENST00000508559 TBC1D3FA6NER0 549 aaPredicted RBP11.05□□□□□ -0.64
BRCC3P1-201ENST00000508559 LRRC72A6NJI9 287 aa11.05□□□□□ -0.64
BRCC3P1-201ENST00000508559 GOLGA8CPA6NN73 597 aa11.05□□□□□ -0.64
BRCC3P1-201ENST00000508559 TBC1D3LB9A6J9 549 aa11.05□□□□□ -0.64
BRCC3P1-201ENST00000508559 CTIFO43310 598 aaKnown RBP11.05□□□□□ -0.64
BRCC3P1-201ENST00000508559 TSPAN6O43657 245 aa11.05□□□□□ -0.64
BRCC3P1-201ENST00000508559 PI15O43692 258 aa11.05□□□□□ -0.64
BRCC3P1-201ENST00000508559 ZNF217O75362 1048 aa11.05□□□□□ -0.64
BRCC3P1-201ENST00000508559 POLBP06746 335 aa11.05□□□□□ -0.64
BRCC3P1-201ENST00000508559 TBC1D3HP0C7X1 549 aa11.05□□□□□ -0.64
BRCC3P1-201ENST00000508559 ZNF30P17039 623 aa11.05□□□□□ -0.64
BRCC3P1-201ENST00000508559 PGAM1P18669 254 aa11.05□□□□□ -0.64
BRCC3P1-201ENST00000508559 LPOP22079 712 aaPredicted RBP11.05□□□□□ -0.64
BRCC3P1-201ENST00000508559 OXTRP30559 389 aa11.05□□□□□ -0.64
BRCC3P1-201ENST00000508559 PHBP35232 272 aa11.05□□□□□ -0.64
BRCC3P1-201ENST00000508559 PXNP49023 591 aaPredicted RBP11.05□□□□□ -0.64
BRCC3P1-201ENST00000508559 BRD3Q15059 726 aa11.05□□□□□ -0.64
BRCC3P1-201ENST00000508559 ACOX1Q15067 660 aa11.05□□□□□ -0.64
BRCC3P1-201ENST00000508559 MSS51Q4VC12 460 aa11.05□□□□□ -0.64
BRCC3P1-201ENST00000508559 TBC1D3GQ6DHY5 549 aa11.05□□□□□ -0.64
BRCC3P1-201ENST00000508559 TBC1D3CQ6IPX1 549 aa11.05□□□□□ -0.64
BRCC3P1-201ENST00000508559 EMBQ6PCB8 327 aa11.05□□□□□ -0.64
BRCC3P1-201ENST00000508559 CAPN12Q6ZSI9 719 aa11.05□□□□□ -0.64
BRCC3P1-201ENST00000508559 USP30Q70CQ3 517 aa11.05□□□□□ -0.64
BRCC3P1-201ENST00000508559 ZNF534Q76KX8 674 aa11.05□□□□□ -0.64
BRCC3P1-201ENST00000508559 DPPA4Q7L190 304 aa11.05□□□□□ -0.64
BRCC3P1-201ENST00000508559 LYSMD3Q7Z3D4 306 aa11.05□□□□□ -0.64
BRCC3P1-201ENST00000508559 TBC1D3Q8IZP1 549 aaPredicted RBP11.05□□□□□ -0.64
BRCC3P1-201ENST00000508559 OTUD6BQ8N6M0 293 aa11.05□□□□□ -0.64
BRCC3P1-201ENST00000508559 PTCD2Q8WV60 388 aaKnown RBP11.05□□□□□ -0.64
BRCC3P1-201ENST00000508559 ZNF669Q96BR6 464 aaPredicted RBP11.05□□□□□ -0.64
BRCC3P1-201ENST00000508559 SPACA7Q96KW9 195 aa11.05□□□□□ -0.64
BRCC3P1-201ENST00000508559 TTC25Q96NG3 672 aa11.05□□□□□ -0.64
BRCC3P1-201ENST00000508559 SMIM14Q96QK8 99 aa11.05□□□□□ -0.64
BRCC3P1-201ENST00000508559 EBNA1BP2Q99848 306 aaKnown RBP11.05□□□□□ -0.64
BRCC3P1-201ENST00000508559 TPSD1Q9BZJ3 242 aa11.05□□□□□ -0.64
BRCC3P1-201ENST00000508559 PHACTR1Q9C0D0 580 aa11.05□□□□□ -0.64
BRCC3P1-201ENST00000508559 BTBD1Q9H0C5 482 aa11.05□□□□□ -0.64
BRCC3P1-201ENST00000508559 VPS37BQ9H9H4 285 aa11.05□□□□□ -0.64
BRCC3P1-201ENST00000508559 PKD2L2Q9NZM6 624 aa11.05□□□□□ -0.64
BRCC3P1-201ENST00000508559 FZD4Q9ULV1 537 aa11.05□□□□□ -0.64
BRCC3P1-201ENST00000508559 CYP8B1Q9UNU6 501 aa11.05□□□□□ -0.64
BRCC3P1-201ENST00000508559 ITM2BQ9Y287 266 aa11.05□□□□□ -0.64
BRCC3P1-201ENST00000508559 FNDC3AQ9Y2H6 1198 aaKnown RBP11.05□□□□□ -0.64
BRCC3P1-201ENST00000508559 TCAF1Q9Y4C2 921 aa11.05□□□□□ -0.64
BRCC3P1-201ENST00000508559 SPO11Q9Y5K1 396 aa11.05□□□□□ -0.64
BRCC3P1-201ENST00000508559 ARL5AQ9Y689 179 aa11.05□□□□□ -0.64
BRCC3P1-201ENST00000508559 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.05□□□□□ -0.64
BRCC3P1-201ENST00000508559 RPS6KL1Q9Y6S9 549 aa11.05□□□□□ -0.64
BRCC3P1-201ENST00000508559 NPIPB15A6NHN6 443 aaPredicted RBP11.04□□□□□ -0.64
BRCC3P1-201ENST00000508559 TNFRSF10AO00220 468 aa11.04□□□□□ -0.64
BRCC3P1-201ENST00000508559 AXIN1O15169 862 aa11.04□□□□□ -0.64
BRCC3P1-201ENST00000508559 SLC7A4O43246 635 aa11.04□□□□□ -0.64
BRCC3P1-201ENST00000508559 MAP3K13O43283 966 aa11.04□□□□□ -0.64
BRCC3P1-201ENST00000508559 BUD23O43709 281 aaKnown RBP11.04□□□□□ -0.64
BRCC3P1-201ENST00000508559 AP1G1O43747 822 aa11.04□□□□□ -0.64
BRCC3P1-201ENST00000508559 NDUFS2O75306 463 aa11.04□□□□□ -0.64
BRCC3P1-201ENST00000508559 CLDN7O95471 211 aa11.04□□□□□ -0.64
BRCC3P1-201ENST00000508559 TTC4O95801 387 aa11.04□□□□□ -0.64
BRCC3P1-201ENST00000508559 FAM153BP0C7A2 387 aa11.04□□□□□ -0.64
BRCC3P1-201ENST00000508559 MYBL2P10244 700 aa11.04□□□□□ -0.64
BRCC3P1-201ENST00000508559 DRD3P35462 400 aa11.04□□□□□ -0.64
BRCC3P1-201ENST00000508559 MMP12P39900 470 aa11.04□□□□□ -0.64
BRCC3P1-201ENST00000508559 HADHAP40939 763 aa11.04□□□□□ -0.64
BRCC3P1-201ENST00000508559 MAGEA3P43357 314 aa11.04□□□□□ -0.64
BRCC3P1-201ENST00000508559 TPMTP51580 245 aa11.04□□□□□ -0.64
BRCC3P1-201ENST00000508559 PMS2P54278 862 aa11.04□□□□□ -0.64
BRCC3P1-201ENST00000508559 PRAMEP78395 509 aa11.04□□□□□ -0.64
BRCC3P1-201ENST00000508559 TMPRSS15P98073 1019 aa11.04□□□□□ -0.64
BRCC3P1-201ENST00000508559 SGCGQ13326 291 aa11.04□□□□□ -0.64
BRCC3P1-201ENST00000508559 PTPRRQ15256 657 aa11.04□□□□□ -0.64
BRCC3P1-201ENST00000508559 FAM153CQ494X1 144 aa11.04□□□□□ -0.64
BRCC3P1-201ENST00000508559 USP39Q53GS9 565 aaKnown RBP11.04□□□□□ -0.64
BRCC3P1-201ENST00000508559 TSTD2Q5T7W7 516 aa11.04□□□□□ -0.64
BRCC3P1-201ENST00000508559 PIP5KL1Q5T9C9 394 aa11.04□□□□□ -0.64
BRCC3P1-201ENST00000508559 AGBL4Q5VU57 503 aa11.04□□□□□ -0.64
BRCC3P1-201ENST00000508559 ARMC3Q5W041 872 aa11.04□□□□□ -0.64
BRCC3P1-201ENST00000508559 LRRC66Q68CR7 880 aa11.04□□□□□ -0.64
BRCC3P1-201ENST00000508559 CRTC1Q6UUV9 634 aa11.04□□□□□ -0.64
BRCC3P1-201ENST00000508559 CES3Q6UWW8 571 aa11.04□□□□□ -0.64
BRCC3P1-201ENST00000508559 TSPAN33Q86UF1 283 aa11.04□□□□□ -0.64
BRCC3P1-201ENST00000508559 MPP5Q8N3R9 675 aa11.04□□□□□ -0.64
BRCC3P1-201ENST00000508559 FBXL6Q8N531 539 aa11.04□□□□□ -0.64
BRCC3P1-201ENST00000508559 MDGA1Q8NFP4 955 aa11.04□□□□□ -0.64
BRCC3P1-201ENST00000508559 OR4K2Q8NGD2 314 aa11.04□□□□□ -0.64
BRCC3P1-201ENST00000508559 OR6P1Q8NGX9 317 aa11.04□□□□□ -0.64
BRCC3P1-201ENST00000508559 GABPB2Q8TAK5 448 aaPredicted RBP11.04□□□□□ -0.64
BRCC3P1-201ENST00000508559 STYXQ8WUJ0 223 aa11.04□□□□□ -0.64
BRCC3P1-201ENST00000508559 UBLCP1Q8WVY7 318 aaPredicted RBP11.04□□□□□ -0.64
BRCC3P1-201ENST00000508559 SPOCK2Q92563 424 aa11.04□□□□□ -0.64
BRCC3P1-201ENST00000508559 SIGLEC10Q96LC7 697 aa11.04□□□□□ -0.64
BRCC3P1-201ENST00000508559 C9orf72Q96LT7 481 aa11.04□□□□□ -0.64
BRCC3P1-201ENST00000508559 MCCC1Q96RQ3 725 aaPredicted RBP11.04□□□□□ -0.64
BRCC3P1-201ENST00000508559 RANBP9Q96S59 729 aa11.04□□□□□ -0.64
BRCC3P1-201ENST00000508559 SGK2Q9HBY8 427 aa11.04□□□□□ -0.64
BRCC3P1-201ENST00000508559 BPIFA1Q9NP55 256 aa11.04□□□□□ -0.64
BRCC3P1-201ENST00000508559 PPANQ9NQ55 473 aaKnown RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms