RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 PTPRGP23470 1445 aa5.3□□□□□ -1.56
TOPBP1-206ENST00000508524 IGHV4OR15-8A0A075B7B6 117 aa5.29□□□□□ -1.56
TOPBP1-206ENST00000508524 SOCS6O14544 535 aa5.29□□□□□ -1.56
TOPBP1-206ENST00000508524 LINC01565O15544 149 aa5.29□□□□□ -1.56
TOPBP1-206ENST00000508524 GALTP07902 379 aa5.29□□□□□ -1.56
TOPBP1-206ENST00000508524 ETFAP13804 333 aa5.29□□□□□ -1.56
TOPBP1-206ENST00000508524 AGAP20933 346 aa5.29□□□□□ -1.56
TOPBP1-206ENST00000508524 ZBTB17Q13105 803 aa5.29□□□□□ -1.56
TOPBP1-206ENST00000508524 TNFAIP1Q13829 316 aa5.29□□□□□ -1.56
TOPBP1-206ENST00000508524 NFIL3Q16649 462 aa5.29□□□□□ -1.56
TOPBP1-206ENST00000508524 MMEL1Q495T6 779 aa5.29□□□□□ -1.56
TOPBP1-206ENST00000508524 ATP13A5Q4VNC0 1218 aa5.29□□□□□ -1.56
TOPBP1-206ENST00000508524 ANKRD54Q6NXT1 300 aa5.29□□□□□ -1.56
TOPBP1-206ENST00000508524 TMEM81Q6P7N7 255 aa5.29□□□□□ -1.56
TOPBP1-206ENST00000508524 UNQ6126/PRO20091Q6UXV3 157 aa5.29□□□□□ -1.56
TOPBP1-206ENST00000508524 MEX3BQ6ZN04 569 aaKnown RBP5.29□□□□□ -1.56
TOPBP1-206ENST00000508524 TUBA1AQ71U36 451 aa5.29□□□□□ -1.56
TOPBP1-206ENST00000508524 LRRC8DQ7L1W4 858 aa5.29□□□□□ -1.56
TOPBP1-206ENST00000508524 NODALQ96S42 347 aa5.29□□□□□ -1.56
TOPBP1-206ENST00000508524 SIN3AQ96ST3 1273 aa5.29□□□□□ -1.56
TOPBP1-206ENST00000508524 TUBA1CQ9BQE3 449 aa5.29□□□□□ -1.56
TOPBP1-206ENST00000508524 HEMGNQ9BXL5 484 aa5.29□□□□□ -1.56
TOPBP1-206ENST00000508524 INTS2Q9H0H0 1204 aaKnown RBP5.29□□□□□ -1.56
TOPBP1-206ENST00000508524 ESRP2Q9H6T0 727 aaKnown RBP5.29□□□□□ -1.56
TOPBP1-206ENST00000508524 EVA1AQ9H8M9 152 aa5.29□□□□□ -1.56
TOPBP1-206ENST00000508524 UBTD1Q9HAC8 227 aa5.29□□□□□ -1.56
TOPBP1-206ENST00000508524 SIX4Q9UIU6 781 aa5.29□□□□□ -1.56
TOPBP1-206ENST00000508524 CNOT7Q9UIV1 285 aaKnown RBP5.29□□□□□ -1.56
TOPBP1-206ENST00000508524 A0A0B4J293 547 aa5.28□□□□□ -1.56
TOPBP1-206ENST00000508524 GAGE10A6NGK3 116 aa5.28□□□□□ -1.56
TOPBP1-206ENST00000508524 HNRNPCL2B2RXH8 293 aa5.28□□□□□ -1.56
TOPBP1-206ENST00000508524 PLRG1O43660 514 aaKnown RBP5.28□□□□□ -1.56
TOPBP1-206ENST00000508524 GUCY1B2O75343 617 aa5.28□□□□□ -1.56
TOPBP1-206ENST00000508524 TACC1O75410 805 aa5.28□□□□□ -1.56
TOPBP1-206ENST00000508524 MTA2O94776 668 aa5.28□□□□□ -1.56
TOPBP1-206ENST00000508524 CD58P19256 250 aa5.28□□□□□ -1.56
TOPBP1-206ENST00000508524 POU1F1P28069 291 aa5.28□□□□□ -1.56
TOPBP1-206ENST00000508524 CDH15P55291 814 aa5.28□□□□□ -1.56
TOPBP1-206ENST00000508524 ARL16Q0P5N6 197 aa5.28□□□□□ -1.56
TOPBP1-206ENST00000508524 ITGADQ13349 1161 aa5.28□□□□□ -1.56
TOPBP1-206ENST00000508524 SGO1Q5FBB7 561 aa5.28□□□□□ -1.56
TOPBP1-206ENST00000508524 SLC22A25Q6T423 547 aa5.28□□□□□ -1.56
TOPBP1-206ENST00000508524 C9orf139Q6ZV77 190 aa5.28□□□□□ -1.56
TOPBP1-206ENST00000508524 MTSS1LQ765P7 747 aa5.28□□□□□ -1.56
TOPBP1-206ENST00000508524 EXOC3L1Q86VI1 746 aa5.28□□□□□ -1.56
TOPBP1-206ENST00000508524 SCCPDHQ8NBX0 429 aa5.28□□□□□ -1.56
TOPBP1-206ENST00000508524 C11orf65Q8NCR3 313 aa5.28□□□□□ -1.56
TOPBP1-206ENST00000508524 AGBL3Q8NEM8 1001 aa5.28□□□□□ -1.56
TOPBP1-206ENST00000508524 NEK9Q8TD19 979 aa5.28□□□□□ -1.56
TOPBP1-206ENST00000508524 SECTM1Q8WVN6 248 aa5.28□□□□□ -1.56
TOPBP1-206ENST00000508524 TANKQ92844 425 aa5.28□□□□□ -1.56
TOPBP1-206ENST00000508524 FBXL8Q96CD0 374 aa5.28□□□□□ -1.56
TOPBP1-206ENST00000508524 HAUS8Q9BT25 410 aa5.28□□□□□ -1.56
TOPBP1-206ENST00000508524 GPR63Q9BZJ6 419 aa5.28□□□□□ -1.56
TOPBP1-206ENST00000508524 SPRY4Q9C004 299 aa5.28□□□□□ -1.56
TOPBP1-206ENST00000508524 TCF7L2Q9NQB0 619 aa5.28□□□□□ -1.56
TOPBP1-206ENST00000508524 C20orf141Q9NUB4 165 aa5.28□□□□□ -1.56
TOPBP1-206ENST00000508524 C1RLQ9NZP8 487 aa5.28□□□□□ -1.56
TOPBP1-206ENST00000508524 HCN3Q9P1Z3 774 aa5.28□□□□□ -1.56
TOPBP1-206ENST00000508524 SLC25A10Q9UBX3 287 aaPredicted RBP5.28□□□□□ -1.56
TOPBP1-206ENST00000508524 TINAGQ9UJW2 476 aa5.28□□□□□ -1.56
TOPBP1-206ENST00000508524 DGKBQ9Y6T7 804 aa5.28□□□□□ -1.56
TOPBP1-206ENST00000508524 BCORL1Q5H9F3 1711 aa5.28□□□□□ -1.56
TOPBP1-206ENST00000508524 WDR81Q562E7 1941 aa5.27□□□□□ -1.57
TOPBP1-206ENST00000508524 ZNF587BE7ETH6 402 aa5.27□□□□□ -1.57
TOPBP1-206ENST00000508524 MID1O15344 667 aa5.27□□□□□ -1.57
TOPBP1-206ENST00000508524 RFPL2O75678 378 aa5.27□□□□□ -1.57
TOPBP1-206ENST00000508524 HSD3B1P14060 373 aa5.27□□□□□ -1.57
TOPBP1-206ENST00000508524 DGKAP23743 735 aa5.27□□□□□ -1.57
TOPBP1-206ENST00000508524 STX2P32856 288 aa5.27□□□□□ -1.57
TOPBP1-206ENST00000508524 NLRP5P59047 1200 aa5.27□□□□□ -1.57
TOPBP1-206ENST00000508524 WRNQ14191 1432 aaPredicted RBP eCLIP5.27□□□□□ -1.57
TOPBP1-206ENST00000508524 NEDD9Q14511 834 aa5.27□□□□□ -1.57
TOPBP1-206ENST00000508524 VEPH1Q14D04 833 aa5.27□□□□□ -1.57
TOPBP1-206ENST00000508524 TXNDC8Q6A555 127 aa5.27□□□□□ -1.57
TOPBP1-206ENST00000508524 CYP26C1Q6V0L0 522 aa5.27□□□□□ -1.57
TOPBP1-206ENST00000508524 SATL1Q86VE3 508 aa5.27□□□□□ -1.57
TOPBP1-206ENST00000508524 FOXRED2Q8IWF2 684 aa5.27□□□□□ -1.57
TOPBP1-206ENST00000508524 DHX40Q8IX18 779 aaKnown RBP5.27□□□□□ -1.57
TOPBP1-206ENST00000508524 SLC35F3Q8IY50 421 aa5.27□□□□□ -1.57
TOPBP1-206ENST00000508524 ZBTB10Q96DT7 871 aa5.27□□□□□ -1.57
TOPBP1-206ENST00000508524 UBXN10Q96LJ8 280 aa5.27□□□□□ -1.57
TOPBP1-206ENST00000508524 BBS4Q96RK4 519 aa5.27□□□□□ -1.57
TOPBP1-206ENST00000508524 SDF2L1Q9HCN8 221 aa5.27□□□□□ -1.57
TOPBP1-206ENST00000508524 MKKSQ9NPJ1 570 aaPredicted RBP5.27□□□□□ -1.57
TOPBP1-206ENST00000508524 KIAA0586Q9BVV6 1533 aa5.27□□□□□ -1.57
TOPBP1-206ENST00000508524 KDM5BQ9UGL1 1544 aa5.27□□□□□ -1.57
TOPBP1-206ENST00000508524 UHRF1BP1LA0JNW5 1464 aa5.26□□□□□ -1.57
TOPBP1-206ENST00000508524 ATXN2Q99700 1313 aaKnown RBP5.26□□□□□ -1.57
TOPBP1-206ENST00000508524 IFNL4K9M1U5 179 aa5.26□□□□□ -1.57
TOPBP1-206ENST00000508524 BCAT2O15382 392 aaPredicted RBP5.26□□□□□ -1.57
TOPBP1-206ENST00000508524 MT-CYBP00156 380 aaPredicted RBP5.26□□□□□ -1.57
TOPBP1-206ENST00000508524 MMP2P08253 660 aa5.26□□□□□ -1.57
TOPBP1-206ENST00000508524 SRCP12931 536 aa5.26□□□□□ -1.57
TOPBP1-206ENST00000508524 AMD1P17707 334 aa5.26□□□□□ -1.57
TOPBP1-206ENST00000508524 EIF2S3P41091 472 aaKnown RBP5.26□□□□□ -1.57
TOPBP1-206ENST00000508524 ACSM2AQ08AH3 577 aa5.26□□□□□ -1.57
TOPBP1-206ENST00000508524 GSG1LQ6UXU4 331 aa5.26□□□□□ -1.57
TOPBP1-206ENST00000508524 FIG4Q92562 907 aa5.26□□□□□ -1.57
TOPBP1-206ENST00000508524 RND1Q92730 232 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms