RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 HPF1Q9NWY4 346 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 CMTM6Q9NX76 183 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 WBP1LQ9NX94 342 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 CD300AQ9UGN4 299 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 LIPT1Q9Y234 373 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 MAGED1Q9Y5V3 778 aaPredicted RBP10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 PSAT1Q9Y617 370 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 TANC1Q9C0D5 1861 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 FMN2Q9NZ56 1722 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 MYH9P35579 1960 aaKnown RBP10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 ATRNO75882 1429 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 MYH3P11055 1940 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 A0A087X0B3 334 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 SLC12A8A0AV02 714 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 FAM92AA1XBS5 289 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 C7orf72A4D263 438 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 SAC3D1A6NKF1 404 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 ZBBXA8MT70 800 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 H0Y626 953 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 I3L521 148 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 PPEF1O14829 653 aaPredicted RBP10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 NUPL2O15504 423 aaKnown RBP10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 POMCP01189 267 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 CYP11A1P05108 521 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 KRT18P05783 430 aaKnown RBP10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 ANXA6P08133 673 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 MYL2P10916 166 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 CYP2A6P11509 494 aaPredicted RBP10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 XRCC5P13010 732 aaKnown RBP10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 RAB4AP20338 218 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 CA4P22748 312 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 ARCN1P48444 511 aaKnown RBP10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 KLK7P49862 253 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 RIDAP52758 137 aaKnown RBP10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 MFAP3P55082 362 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 RGS1Q08116 209 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 NME3Q13232 169 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 PPIL2Q13356 520 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 CAPRIN1Q14444 709 aaKnown RBP10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 MAN2A1Q16706 1144 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 MCMDC2Q4G0Z9 681 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 NHSL2Q5HYW2 709 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 RRAGAQ7L523 313 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 ERMP1Q7Z2K6 904 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 ZDHHC13Q8IUH4 622 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 NUDCD3Q8IVD9 361 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 UBL4BQ8N7F7 174 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 TXNDC5Q8NBS9 432 aaKnown RBP10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 CLRN3Q8NCR9 226 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 TMEM35BQ8NCS4 154 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 PIWIL2Q8TC59 973 aaKnown RBP10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 LRRC39Q96DD0 335 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 CMTM5Q96DZ9 223 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 PCMTD1Q96MG8 357 aaPredicted RBP10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 IL12RB2Q99665 862 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 OR51M1Q9H341 326 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 RANBP3Q9H6Z4 567 aaPredicted RBP10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 ZFP14Q9HCL3 533 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 NINJ2Q9NZG7 142 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 USP22Q9UPT9 525 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 AGTPBP1Q9UPW5 1226 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 NFASCO94856 1347 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 TNRQ92752 1358 aa10.84□□□□□ -0.67
PDLIM5-210ENST00000508216 EDC4Q6P2E9 1401 aaKnown RBP10.84□□□□□ -0.67
PDLIM5-210ENST00000508216 GSTTP1A0A1W2PQM5 241 aa10.84□□□□□ -0.67
PDLIM5-210ENST00000508216 E7EWF7 191 aa10.84□□□□□ -0.67
PDLIM5-210ENST00000508216 DDX3YO15523 660 aaKnown RBP10.84□□□□□ -0.67
PDLIM5-210ENST00000508216 CDC123O75794 336 aaPredicted RBP10.84□□□□□ -0.67
PDLIM5-210ENST00000508216 FAM155BO75949 473 aa10.84□□□□□ -0.67
PDLIM5-210ENST00000508216 IPO13O94829 963 aaKnown RBP10.84□□□□□ -0.67
PDLIM5-210ENST00000508216 GUCA1CO95843 209 aa10.84□□□□□ -0.67
PDLIM5-210ENST00000508216 TSPAN12O95859 305 aa10.84□□□□□ -0.67
PDLIM5-210ENST00000508216 EPOP01588 193 aa10.84□□□□□ -0.67
PDLIM5-210ENST00000508216 S100A9P06702 114 aaKnown RBP10.84□□□□□ -0.67
PDLIM5-210ENST00000508216 CETPP11597 493 aa10.84□□□□□ -0.67
PDLIM5-210ENST00000508216 GNSP15586 552 aa10.84□□□□□ -0.67
PDLIM5-210ENST00000508216 RPA3P35244 121 aaPredicted RBP10.84□□□□□ -0.67
PDLIM5-210ENST00000508216 GNALP38405 381 aa10.84□□□□□ -0.67
PDLIM5-210ENST00000508216 GRIA1P42261 906 aa10.84□□□□□ -0.67
PDLIM5-210ENST00000508216 IL12RB1P42701 662 aa10.84□□□□□ -0.67
PDLIM5-210ENST00000508216 GCGRP47871 477 aa10.84□□□□□ -0.67
PDLIM5-210ENST00000508216 CPA2P48052 419 aa10.84□□□□□ -0.67
PDLIM5-210ENST00000508216 SEPHS1P49903 392 aa10.84□□□□□ -0.67
PDLIM5-210ENST00000508216 ITGA8P53708 1063 aa10.84□□□□□ -0.67
PDLIM5-210ENST00000508216 OR2B6P58173 313 aa10.84□□□□□ -0.67
PDLIM5-210ENST00000508216 DEFA1P59665 94 aa10.84□□□□□ -0.67
PDLIM5-210ENST00000508216 DEFA3P59666 94 aa10.84□□□□□ -0.67
PDLIM5-210ENST00000508216 AP1S1P61966 158 aa10.84□□□□□ -0.67
PDLIM5-210ENST00000508216 ALDH6A1Q02252 535 aaKnown RBP10.84□□□□□ -0.67
PDLIM5-210ENST00000508216 DSC1Q08554 894 aa10.84□□□□□ -0.67
PDLIM5-210ENST00000508216 TMEM132BQ14DG7 1078 aa10.84□□□□□ -0.67
PDLIM5-210ENST00000508216 DGUOKQ16854 277 aa10.84□□□□□ -0.67
PDLIM5-210ENST00000508216 MGAT5BQ3V5L5 792 aa10.84□□□□□ -0.67
PDLIM5-210ENST00000508216 MAMDC4Q6UXC1 1216 aa10.84□□□□□ -0.67
PDLIM5-210ENST00000508216 USP45Q70EL2 814 aa10.84□□□□□ -0.67
PDLIM5-210ENST00000508216 ENOSF1Q7L5Y1 443 aa10.84□□□□□ -0.67
PDLIM5-210ENST00000508216 LHFPL3Q86UP9 236 aa10.84□□□□□ -0.67
PDLIM5-210ENST00000508216 SEPT12Q8IYM1 358 aa10.84□□□□□ -0.67
PDLIM5-210ENST00000508216 LGI2Q8N0V4 545 aa10.84□□□□□ -0.67
PDLIM5-210ENST00000508216 TTLL6Q8N841 843 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms