RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 LDHDQ86WU2 507 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 CFAP206Q8IYR0 622 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 TC2NQ8N9U0 490 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 L3MBTL4Q8NA19 623 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 TNFRSF25Q93038 417 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 SPSB4Q96A44 273 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 SNF8Q96H20 258 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 FAM20AQ96MK3 541 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 ZNF560Q96MR9 790 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 POLR1BQ9H9Y6 1135 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 PCDH9Q9HC56 1237 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 DNAJC17Q9NVM6 304 aaKnown RBP7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 HYPKQ9NX55 129 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 HBS1LQ9Y450 684 aaKnown RBP7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 UNC13BO14795 1591 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 C1orf232A0A0U1RR37 186 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 LRRC53A6NM62 1247 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 GOLGA8JA6NMD2 632 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 GOLGA8TH3BQL2 631 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 RBBP9O75884 186 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 GOLGA8HP0CJ92 632 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 ATF2P15336 505 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 CD1BP29016 333 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 ENTPD1P49961 510 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 SOX8P57073 446 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 YBX1P67809 324 aaKnown RBP7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 TGM3Q08188 693 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 CTBP1Q13363 440 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 GRM4Q14833 912 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 TMEM132BQ14DG7 1078 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 PON2Q15165 354 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 EPHA7Q15375 998 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 MOGQ16653 247 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 FAM83EQ2M2I3 478 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 GCNT6Q5T4J0 391 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 PIP5KL1Q5T9C9 394 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 ZNF385CQ66K41 422 aaPredicted RBP7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 MAMDC4Q6UXC1 1216 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 LRRC70Q7Z2Q7 622 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 CABP7Q86V35 215 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 MRPL41Q8IXM3 137 aaKnown RBP7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 MCPH1Q8NEM0 835 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 POMGNT1Q8WZA1 660 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 RNF31Q96EP0 1072 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 CHMP6Q96FZ7 201 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 SELENOSQ9BQE4 189 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 C1QTNF3Q9BXJ4 246 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 RAB17Q9H0T7 212 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 IL26Q9NPH9 171 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 BEX4Q9NWD9 120 aaPredicted RBP7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 SATB2Q9UPW6 733 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 PPIL1Q9Y3C6 166 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 PARD3Q8TEW0 1356 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 NPHP3Q7Z494 1330 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 TTC21AQ8NDW8 1320 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 PLXNC1O60486 1568 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 TTC37Q6PGP7 1564 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 HECW2Q9P2P5 1572 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 E9PCH4 1651 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 TMEM221A6NGB7 291 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 PRR23D1E9PI22 279 aaPredicted RBP7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 PSMD11O00231 422 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 ALOX15BO15296 676 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 TLX2O43763 284 aaPredicted RBP7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 CRCPO75575 148 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 CDC123O75794 336 aaPredicted RBP7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 ABHD16AO95870 558 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 PRR23D2P0DMB1 279 aaPredicted RBP7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 CDH2P19022 906 aaPredicted RBP7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 TUBG1P23258 451 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 MST1P26927 711 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 AIF1P55008 147 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 ATP5IP56385 69 aaPredicted RBP7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 NIPAL4Q0D2K0 466 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 GRIK4Q16099 956 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 ZNF829Q3KNS6 432 aaPredicted RBP7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 CLVS2Q5SYC1 327 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 TUBA3EQ6PEY2 450 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 WDR88Q6ZMY6 472 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 SLC24A5Q71RS6 500 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 NLRP9Q7RTR0 991 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 TAS1R1Q7RTX1 841 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 HAUS6Q7Z4H7 955 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 RASAL3Q86YV0 1011 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 RAPGEF4Q8WZA2 1011 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 GRAMD1AQ96CP6 724 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 SSX3Q99909 188 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 ZNF416Q9BWM5 594 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 CDIP1Q9H305 208 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 TDRD3Q9H7E2 651 aaKnown RBP7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 TRPC7Q9HCX4 862 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 TUBG2Q9NRH3 451 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 FBXO28Q9NVF7 368 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 PGPEP1Q9NXJ5 209 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 FBXL7Q9UJT9 491 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 GGA1Q9UJY5 639 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 SOX13Q9UN79 622 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 RNF24Q9Y225 148 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 GDAQ9Y2T3 454 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 ADCY9O60503 1353 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms