RNA–Protein interactions for RNA: ENST00000507282.1

LPCAT1-204, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 2

Gene LPCAT1, Length 417 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-204ENST00000507282 USP45Q70EL2 814 aa17.11■□□□□ 0.33
LPCAT1-204ENST00000507282 RD3Q7Z3Z2 195 aa17.11■□□□□ 0.33
LPCAT1-204ENST00000507282 NDUFAF2Q8N183 169 aa17.11■□□□□ 0.33
LPCAT1-204ENST00000507282 PQLC3Q8N755 202 aa17.11■□□□□ 0.33
LPCAT1-204ENST00000507282 PLA2G15Q8NCC3 412 aa17.11■□□□□ 0.33
LPCAT1-204ENST00000507282 SCG3Q8WXD2 468 aaKnown RBP17.11■□□□□ 0.33
LPCAT1-204ENST00000507282 RAPGEF5Q92565 580 aa17.11■□□□□ 0.33
LPCAT1-204ENST00000507282 MAML1Q92585 1016 aa17.11■□□□□ 0.33
LPCAT1-204ENST00000507282 FATE1Q969F0 183 aa17.11■□□□□ 0.33
LPCAT1-204ENST00000507282 RNF157Q96PX1 679 aa17.11■□□□□ 0.33
LPCAT1-204ENST00000507282 RBM22Q9NW64 420 aaKnown RBP eCLIP17.11■□□□□ 0.331e-6■■■□□ 19.2
LPCAT1-204ENST00000507282 KCTD5Q9NXV2 234 aa17.11■□□□□ 0.33
LPCAT1-204ENST00000507282 AMACRQ9UHK6 382 aa17.11■□□□□ 0.33
LPCAT1-204ENST00000507282 INTUQ9ULD6 942 aa17.11■□□□□ 0.33
LPCAT1-204ENST00000507282 TTLL3Q9Y4R7 772 aa17.11■□□□□ 0.33
LPCAT1-204ENST00000507282 RAI2Q9Y5P3 530 aa17.11■□□□□ 0.33
LPCAT1-204ENST00000507282 U3KQA8 63 aa17.11■□□□□ 0.33
LPCAT1-204ENST00000507282 ANKRD11Q6UB99 2663 aaPredicted RBP17.11■□□□□ 0.33
LPCAT1-204ENST00000507282 CPED1A4D0V7 1026 aa17.1■□□□□ 0.33
LPCAT1-204ENST00000507282 OPA1O60313 960 aa17.1■□□□□ 0.33
LPCAT1-204ENST00000507282 HEXIM1O94992 359 aaKnown RBP17.1■□□□□ 0.33
LPCAT1-204ENST00000507282 MT-CO3P00414 261 aa17.1■□□□□ 0.33
LPCAT1-204ENST00000507282 ALPIP09923 528 aa17.1■□□□□ 0.33
LPCAT1-204ENST00000507282 CCNB1P14635 433 aa17.1■□□□□ 0.33
LPCAT1-204ENST00000507282 KELP23276 732 aa17.1■□□□□ 0.33
LPCAT1-204ENST00000507282 GBE1Q04446 702 aa17.1■□□□□ 0.33
LPCAT1-204ENST00000507282 ARHGEF7Q14155 803 aa17.1■□□□□ 0.33
LPCAT1-204ENST00000507282 NR0B2Q15466 257 aa17.1■□□□□ 0.33
LPCAT1-204ENST00000507282 CNGA3Q16281 694 aa17.1■□□□□ 0.33
LPCAT1-204ENST00000507282 DENND2CQ68D51 928 aa17.1■□□□□ 0.33
LPCAT1-204ENST00000507282 DCBLD1Q8N8Z6 715 aa17.1■□□□□ 0.33
LPCAT1-204ENST00000507282 CCNYQ8ND76 341 aa17.1■□□□□ 0.33
LPCAT1-204ENST00000507282 IFI44Q8TCB0 444 aa17.1■□□□□ 0.33
LPCAT1-204ENST00000507282 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.1■□□□□ 0.33
LPCAT1-204ENST00000507282 NUS1Q96E22 293 aa17.1■□□□□ 0.33
LPCAT1-204ENST00000507282 SCRN2Q96FV2 425 aa17.1■□□□□ 0.33
LPCAT1-204ENST00000507282 MAK16Q9BXY0 300 aaKnown RBP17.1■□□□□ 0.33
LPCAT1-204ENST00000507282 CLPBQ9H078 707 aa17.1■□□□□ 0.33
LPCAT1-204ENST00000507282 ZNF487B1APH4 448 aa17.09■□□□□ 0.33
LPCAT1-204ENST00000507282 PDE2AO00408 941 aaPredicted RBP17.09■□□□□ 0.33
LPCAT1-204ENST00000507282 YY2O15391 372 aa17.09■□□□□ 0.33
LPCAT1-204ENST00000507282 TNFP01375 233 aa17.09■□□□□ 0.33
LPCAT1-204ENST00000507282 HOXC4P09017 264 aaPredicted RBP17.09■□□□□ 0.33
LPCAT1-204ENST00000507282 CA4P22748 312 aa17.09■□□□□ 0.33
LPCAT1-204ENST00000507282 SLC1A1P43005 524 aa17.09■□□□□ 0.33
LPCAT1-204ENST00000507282 KIAA1024LP59773 190 aa17.09■□□□□ 0.33
LPCAT1-204ENST00000507282 C6orf132Q5T0Z8 1188 aa17.09■□□□□ 0.33
LPCAT1-204ENST00000507282 LRRC38Q5VT99 294 aa17.09■□□□□ 0.33
LPCAT1-204ENST00000507282 ESRP1Q6NXG1 681 aaKnown RBP17.09■□□□□ 0.33
LPCAT1-204ENST00000507282 PNCKQ6P2M8 343 aa17.09■□□□□ 0.33
LPCAT1-204ENST00000507282 LVRNQ6Q4G3 990 aa17.09■□□□□ 0.33
LPCAT1-204ENST00000507282 VSIG1Q86XK7 387 aa17.09■□□□□ 0.33
LPCAT1-204ENST00000507282 GKN2Q86XP6 184 aa17.09■□□□□ 0.33
LPCAT1-204ENST00000507282 SDR16C5Q8N3Y7 309 aa17.09■□□□□ 0.33
LPCAT1-204ENST00000507282 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.09■□□□□ 0.33
LPCAT1-204ENST00000507282 OR56A4Q8NGH8 313 aa17.09■□□□□ 0.33
LPCAT1-204ENST00000507282 TPCN2Q8NHX9 752 aa17.09■□□□□ 0.33
LPCAT1-204ENST00000507282 MAPK15Q8TD08 544 aa17.09■□□□□ 0.33
LPCAT1-204ENST00000507282 FUBP1Q96AE4 644 aaKnown RBP17.09■□□□□ 0.33
LPCAT1-204ENST00000507282 HDAC11Q96DB2 347 aa17.09■□□□□ 0.33
LPCAT1-204ENST00000507282 COQ10AQ96MF6 247 aa17.09■□□□□ 0.33
LPCAT1-204ENST00000507282 BOCQ9BWV1 1114 aa17.09■□□□□ 0.33
LPCAT1-204ENST00000507282 NRSN2Q9GZP1 204 aa17.09■□□□□ 0.33
LPCAT1-204ENST00000507282 WDR26Q9H7D7 661 aa17.09■□□□□ 0.33
LPCAT1-204ENST00000507282 DTLQ9NZJ0 730 aa17.09■□□□□ 0.33
LPCAT1-204ENST00000507282 AK5Q9Y6K8 562 aa17.09■□□□□ 0.33
LPCAT1-204ENST00000507282 ACACAQ13085 2346 aa17.09■□□□□ 0.33
LPCAT1-204ENST00000507282 PKD1L2Q7Z442 2459 aa17.09■□□□□ 0.33
LPCAT1-204ENST00000507282 DMXL2Q8TDJ6 3036 aa17.08■□□□□ 0.33
LPCAT1-204ENST00000507282 MYLKQ15746 1914 aa17.08■□□□□ 0.33
LPCAT1-204ENST00000507282 EME2A4GXA9 379 aaPredicted RBP17.08■□□□□ 0.32
LPCAT1-204ENST00000507282 NPIPB15A6NHN6 443 aaPredicted RBP17.08■□□□□ 0.32
LPCAT1-204ENST00000507282 PSMD11O00231 422 aa17.08■□□□□ 0.32
LPCAT1-204ENST00000507282 KRT1P04264 644 aa17.08■□□□□ 0.32
LPCAT1-204ENST00000507282 GM2AP17900 193 aa17.08■□□□□ 0.32
LPCAT1-204ENST00000507282 TRIM23P36406 574 aa17.08■□□□□ 0.32
LPCAT1-204ENST00000507282 EPHB1P54762 984 aa17.08■□□□□ 0.32
LPCAT1-204ENST00000507282 DSC2Q02487 901 aa17.08■□□□□ 0.32
LPCAT1-204ENST00000507282 SLC10A2Q12908 348 aaPredicted RBP17.08■□□□□ 0.32
LPCAT1-204ENST00000507282 TCEAL1Q15170 157 aa17.08■□□□□ 0.32
LPCAT1-204ENST00000507282 ALG1LQ6GMV1 187 aa17.08■□□□□ 0.32
LPCAT1-204ENST00000507282 GUSBP11Q6P575 273 aa17.08■□□□□ 0.32
LPCAT1-204ENST00000507282 EFL1Q7Z2Z2 1120 aaKnown RBP17.08■□□□□ 0.32
LPCAT1-204ENST00000507282 RHOT1Q8IXI2 618 aa17.08■□□□□ 0.32
LPCAT1-204ENST00000507282 CCDC13Q8IYE1 715 aa17.08■□□□□ 0.32
LPCAT1-204ENST00000507282 PIH1D2Q8WWB5 315 aa17.08■□□□□ 0.32
LPCAT1-204ENST00000507282 NAT6Q93015 286 aa17.08■□□□□ 0.32
LPCAT1-204ENST00000507282 DEPDC7Q96QD5 511 aa17.08■□□□□ 0.32
LPCAT1-204ENST00000507282 MCCC1Q96RQ3 725 aaPredicted RBP17.08■□□□□ 0.32
LPCAT1-204ENST00000507282 DDX56Q9NY93 547 aaKnown RBP17.08■□□□□ 0.32
LPCAT1-204ENST00000507282 RAXQ9Y2V3 346 aa17.08■□□□□ 0.32
LPCAT1-204ENST00000507282 PPIL1Q9Y3C6 166 aa17.08■□□□□ 0.32
LPCAT1-204ENST00000507282 HEY1Q9Y5J3 304 aa17.08■□□□□ 0.32
LPCAT1-204ENST00000507282 DGKBQ9Y6T7 804 aa17.08■□□□□ 0.32
LPCAT1-204ENST00000507282 FREM2Q5SZK8 3169 aa17.08■□□□□ 0.32
LPCAT1-204ENST00000507282 ZZEF1O43149 2961 aa17.08■□□□□ 0.32
LPCAT1-204ENST00000507282 APC2O95996 2303 aa17.08■□□□□ 0.32
LPCAT1-204ENST00000507282 WDFY3Q8IZQ1 3526 aa17.07■□□□□ 0.32
LPCAT1-204ENST00000507282 APOL1O14791 398 aa17.07■□□□□ 0.32
LPCAT1-204ENST00000507282 TNFRSF10CO14798 259 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms