RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 TTC31Q49AM3 519 aaPredicted RBP14.22□□□□□ -0.13
RNF4-208ENST00000507247 DNAJC21Q5F1R6 531 aaKnown RBP14.22□□□□□ -0.13
RNF4-208ENST00000507247 CRTC1Q6UUV9 634 aa14.22□□□□□ -0.13
RNF4-208ENST00000507247 MAMSTRQ6ZN01 415 aa14.22□□□□□ -0.13
RNF4-208ENST00000507247 USP30Q70CQ3 517 aa14.22□□□□□ -0.13
RNF4-208ENST00000507247 CENPUQ71F23 418 aa14.22□□□□□ -0.13
RNF4-208ENST00000507247 DPPA4Q7L190 304 aa14.22□□□□□ -0.13
RNF4-208ENST00000507247 ANKMY2Q8IV38 441 aa14.22□□□□□ -0.13
RNF4-208ENST00000507247 NDUFAF2Q8N183 169 aa14.22□□□□□ -0.13
RNF4-208ENST00000507247 GANCQ8TET4 914 aa14.22□□□□□ -0.13
RNF4-208ENST00000507247 EID2BQ96D98 161 aa14.22□□□□□ -0.13
RNF4-208ENST00000507247 RANBP9Q96S59 729 aa14.22□□□□□ -0.13
RNF4-208ENST00000507247 TPSD1Q9BZJ3 242 aa14.22□□□□□ -0.13
RNF4-208ENST00000507247 PHACTR1Q9C0D0 580 aa14.22□□□□□ -0.13
RNF4-208ENST00000507247 IL22Q9GZX6 179 aa14.22□□□□□ -0.13
RNF4-208ENST00000507247 USP36Q9P275 1121 aaKnown RBP14.22□□□□□ -0.13
RNF4-208ENST00000507247 CHMP2BQ9UQN3 213 aa14.22□□□□□ -0.13
RNF4-208ENST00000507247 TCAF1Q9Y4C2 921 aa14.22□□□□□ -0.13
RNF4-208ENST00000507247 KCTD3Q9Y597 815 aa14.22□□□□□ -0.13
RNF4-208ENST00000507247 FADS3Q9Y5Q0 445 aa14.22□□□□□ -0.13
RNF4-208ENST00000507247 ARL5AQ9Y689 179 aa14.22□□□□□ -0.13
RNF4-208ENST00000507247 TEX264Q9Y6I9 313 aa14.22□□□□□ -0.13
RNF4-208ENST00000507247 PLXNA2O75051 1894 aa14.21□□□□□ -0.13
RNF4-208ENST00000507247 C1orf232A0A0U1RR37 186 aa14.21□□□□□ -0.13
RNF4-208ENST00000507247 PLRG1O43660 514 aaKnown RBP14.21□□□□□ -0.13
RNF4-208ENST00000507247 LDB2O43679 373 aa14.21□□□□□ -0.13
RNF4-208ENST00000507247 BUD23O43709 281 aaKnown RBP14.21□□□□□ -0.13
RNF4-208ENST00000507247 ALDH1A2O94788 518 aa14.21□□□□□ -0.13
RNF4-208ENST00000507247 APBB3O95704 486 aa14.21□□□□□ -0.13
RNF4-208ENST00000507247 SLC4A1P02730 911 aa14.21□□□□□ -0.13
RNF4-208ENST00000507247 C1SP09871 688 aa14.21□□□□□ -0.13
RNF4-208ENST00000507247 ACADMP11310 421 aa14.21□□□□□ -0.13
RNF4-208ENST00000507247 CYP2A6P11509 494 aaPredicted RBP14.21□□□□□ -0.13
RNF4-208ENST00000507247 MCM3P25205 808 aa14.21□□□□□ -0.13
RNF4-208ENST00000507247 PXNP49023 591 aaPredicted RBP14.21□□□□□ -0.13
RNF4-208ENST00000507247 TPMTP51580 245 aa14.21□□□□□ -0.13
RNF4-208ENST00000507247 CCR3P51677 355 aa14.21□□□□□ -0.13
RNF4-208ENST00000507247 SUOXP51687 545 aa14.21□□□□□ -0.13
RNF4-208ENST00000507247 ELP6Q0PNE2 266 aa14.21□□□□□ -0.13
RNF4-208ENST00000507247 PTPRCAPQ14761 206 aa14.21□□□□□ -0.13
RNF4-208ENST00000507247 TAF1AQ15573 450 aaPredicted RBP14.21□□□□□ -0.13
RNF4-208ENST00000507247 CNGA3Q16281 694 aa14.21□□□□□ -0.13
RNF4-208ENST00000507247 TMEM52BQ4KMG9 183 aa14.21□□□□□ -0.13
RNF4-208ENST00000507247 PCID2Q5JVF3 399 aa14.21□□□□□ -0.13
RNF4-208ENST00000507247 UBAP2Q5T6F2 1119 aaKnown RBP14.21□□□□□ -0.13
RNF4-208ENST00000507247 LRRC66Q68CR7 880 aa14.21□□□□□ -0.13
RNF4-208ENST00000507247 MICALCLQ6ZW33 695 aa14.21□□□□□ -0.13
RNF4-208ENST00000507247 GLT6D1Q7Z4J2 308 aa14.21□□□□□ -0.13
RNF4-208ENST00000507247 BMP8AQ7Z5Y6 402 aa14.21□□□□□ -0.13
RNF4-208ENST00000507247 FAM124AQ86V42 546 aa14.21□□□□□ -0.13
RNF4-208ENST00000507247 ZBED8Q8IZ13 594 aa14.21□□□□□ -0.13
RNF4-208ENST00000507247 CAMKK1Q8N5S9 505 aa14.21□□□□□ -0.13
RNF4-208ENST00000507247 FBXO36Q8NEA4 188 aa14.21□□□□□ -0.13
RNF4-208ENST00000507247 PPHLN1Q8NEY8 458 aaKnown RBP14.21□□□□□ -0.13
RNF4-208ENST00000507247 BRSK1Q8TDC3 778 aa14.21□□□□□ -0.13
RNF4-208ENST00000507247 AENQ8WTP8 325 aaKnown RBP14.21□□□□□ -0.13
RNF4-208ENST00000507247 RAB7BQ96AH8 199 aa14.21□□□□□ -0.13
RNF4-208ENST00000507247 ZNF778Q96MU6 729 aa14.21□□□□□ -0.13
RNF4-208ENST00000507247 EBNA1BP2Q99848 306 aaKnown RBP14.21□□□□□ -0.13
RNF4-208ENST00000507247 PLAC1Q9HBJ0 212 aa14.21□□□□□ -0.13
RNF4-208ENST00000507247 ITM2CQ9NQX7 267 aa14.21□□□□□ -0.13
RNF4-208ENST00000507247 CHRAC1Q9NRG0 131 aa14.21□□□□□ -0.13
RNF4-208ENST00000507247 SPATA6Q9NWH7 488 aaPredicted RBP14.21□□□□□ -0.13
RNF4-208ENST00000507247 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.21□□□□□ -0.13
RNF4-208ENST00000507247 HACD3Q9P035 362 aa14.21□□□□□ -0.13
RNF4-208ENST00000507247 FZD4Q9ULV1 537 aa14.21□□□□□ -0.13
RNF4-208ENST00000507247 SOX13Q9UN79 622 aa14.21□□□□□ -0.13
RNF4-208ENST00000507247 HCN4Q9Y3Q4 1203 aa14.21□□□□□ -0.13
RNF4-208ENST00000507247 MAD1L1Q9Y6D9 718 aa14.21□□□□□ -0.13
RNF4-208ENST00000507247 CACNA1IQ9P0X4 2223 aa14.21□□□□□ -0.14
RNF4-208ENST00000507247 TRPM6Q9BX84 2022 aa14.2□□□□□ -0.14
RNF4-208ENST00000507247 TRIOO75962 3097 aa14.2□□□□□ -0.14
RNF4-208ENST00000507247 HEATR9A2RTY3 570 aa14.2□□□□□ -0.14
RNF4-208ENST00000507247 MROH6A6NGR9 719 aa14.2□□□□□ -0.14
RNF4-208ENST00000507247 AP1G1O43747 822 aa14.2□□□□□ -0.14
RNF4-208ENST00000507247 IGLV3-19P01714 112 aa14.2□□□□□ -0.14
RNF4-208ENST00000507247 GM2AP17900 193 aa14.2□□□□□ -0.14
RNF4-208ENST00000507247 ADRA1DP25100 572 aa14.2□□□□□ -0.14
RNF4-208ENST00000507247 NMBRP28336 390 aa14.2□□□□□ -0.14
RNF4-208ENST00000507247 MAGEA4P43358 317 aa14.2□□□□□ -0.14
RNF4-208ENST00000507247 ADPRHP54922 357 aa14.2□□□□□ -0.14
RNF4-208ENST00000507247 DMWDQ09019 674 aa14.2□□□□□ -0.14
RNF4-208ENST00000507247 TSTD2Q5T7W7 516 aa14.2□□□□□ -0.14
RNF4-208ENST00000507247 ERAP2Q6P179 960 aa14.2□□□□□ -0.14
RNF4-208ENST00000507247 CASC4Q6P4E1 433 aa14.2□□□□□ -0.14
RNF4-208ENST00000507247 CES3Q6UWW8 571 aa14.2□□□□□ -0.14
RNF4-208ENST00000507247 LIPIQ6XZB0 460 aa14.2□□□□□ -0.14
RNF4-208ENST00000507247 TMC3Q7Z5M5 1100 aa14.2□□□□□ -0.14
RNF4-208ENST00000507247 KBTBD6Q86V97 674 aa14.2□□□□□ -0.14
RNF4-208ENST00000507247 FBXL6Q8N531 539 aa14.2□□□□□ -0.14
RNF4-208ENST00000507247 OR13C4Q8NGS5 318 aa14.2□□□□□ -0.14
RNF4-208ENST00000507247 OR14C36Q8NHC7 312 aa14.2□□□□□ -0.14
RNF4-208ENST00000507247 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.2□□□□□ -0.14
RNF4-208ENST00000507247 LRRC39Q96DD0 335 aa14.2□□□□□ -0.14
RNF4-208ENST00000507247 FAM122AQ96E09 287 aa14.2□□□□□ -0.14
RNF4-208ENST00000507247 STAMBPL1Q96FJ0 436 aa14.2□□□□□ -0.14
RNF4-208ENST00000507247 C9orf72Q96LT7 481 aa14.2□□□□□ -0.14
RNF4-208ENST00000507247 WRAP53Q9BUR4 548 aaKnown RBP14.2□□□□□ -0.14
RNF4-208ENST00000507247 KIFC1Q9BW19 673 aa14.2□□□□□ -0.14
RNF4-208ENST00000507247 TXLNGYQ9BZA5 131 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms