RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 HOXC4P09017 264 aaPredicted RBP9.1□□□□□ -0.95
PDLIM5-209ENST00000506632 TSHRP16473 764 aa9.1□□□□□ -0.95
PDLIM5-209ENST00000506632 LHCGRP22888 699 aa9.1□□□□□ -0.95
PDLIM5-209ENST00000506632 CCNCP24863 283 aa9.1□□□□□ -0.95
PDLIM5-209ENST00000506632 GJC1P36383 396 aa9.1□□□□□ -0.95
PDLIM5-209ENST00000506632 SSR1P43307 286 aaKnown RBP9.1□□□□□ -0.95
PDLIM5-209ENST00000506632 BLKP51451 505 aa9.1□□□□□ -0.95
PDLIM5-209ENST00000506632 KIAA1024LP59773 190 aa9.1□□□□□ -0.95
PDLIM5-209ENST00000506632 SLC10A2Q12908 348 aaPredicted RBP9.1□□□□□ -0.95
PDLIM5-209ENST00000506632 C1orf61Q13536 156 aa9.1□□□□□ -0.95
PDLIM5-209ENST00000506632 TCEAL1Q15170 157 aa9.1□□□□□ -0.95
PDLIM5-209ENST00000506632 CNGA3Q16281 694 aa9.1□□□□□ -0.95
PDLIM5-209ENST00000506632 C6orf132Q5T0Z8 1188 aa9.1□□□□□ -0.95
PDLIM5-209ENST00000506632 KCTD16Q68DU8 428 aa9.1□□□□□ -0.95
PDLIM5-209ENST00000506632 ESRP1Q6NXG1 681 aaKnown RBP9.1□□□□□ -0.95
PDLIM5-209ENST00000506632 SARM1Q6SZW1 724 aa9.1□□□□□ -0.95
PDLIM5-209ENST00000506632 VSIG1Q86XK7 387 aa9.1□□□□□ -0.95
PDLIM5-209ENST00000506632 MAP7D3Q8IWC1 876 aa9.1□□□□□ -0.95
PDLIM5-209ENST00000506632 RHOT2Q8IXI1 618 aa9.1□□□□□ -0.95
PDLIM5-209ENST00000506632 SLC35F3Q8IY50 421 aa9.1□□□□□ -0.95
PDLIM5-209ENST00000506632 PELI3Q8N2H9 469 aa9.1□□□□□ -0.95
PDLIM5-209ENST00000506632 SDR16C5Q8N3Y7 309 aa9.1□□□□□ -0.95
PDLIM5-209ENST00000506632 FSTL5Q8N475 847 aaPredicted RBP9.1□□□□□ -0.95
PDLIM5-209ENST00000506632 KCTD6Q8NC69 237 aa9.1□□□□□ -0.95
PDLIM5-209ENST00000506632 SLC35G2Q8TBE7 412 aa9.1□□□□□ -0.95
PDLIM5-209ENST00000506632 NSMCE1Q8WV22 266 aa9.1□□□□□ -0.95
PDLIM5-209ENST00000506632 PIH1D2Q8WWB5 315 aa9.1□□□□□ -0.95
PDLIM5-209ENST00000506632 RAPGEF5Q92565 580 aa9.1□□□□□ -0.95
PDLIM5-209ENST00000506632 SCRN2Q96FV2 425 aa9.1□□□□□ -0.95
PDLIM5-209ENST00000506632 WDR92Q96MX6 357 aa9.1□□□□□ -0.95
PDLIM5-209ENST00000506632 IL12RB2Q99665 862 aa9.1□□□□□ -0.95
PDLIM5-209ENST00000506632 SLC13A1Q9BZW2 595 aa9.1□□□□□ -0.95
PDLIM5-209ENST00000506632 DEF6Q9H4E7 631 aa9.1□□□□□ -0.95
PDLIM5-209ENST00000506632 NHEJ1Q9H9Q4 299 aaPredicted RBP9.1□□□□□ -0.95
PDLIM5-209ENST00000506632 NT5MQ9NPB1 228 aa9.1□□□□□ -0.95
PDLIM5-209ENST00000506632 SCUBE2Q9NQ36 999 aa9.1□□□□□ -0.95
PDLIM5-209ENST00000506632 SPTLC3Q9NUV7 552 aa9.1□□□□□ -0.95
PDLIM5-209ENST00000506632 EVA1BQ9NVM1 165 aa9.1□□□□□ -0.95
PDLIM5-209ENST00000506632 ZNHIT6Q9NWK9 470 aaKnown RBP9.1□□□□□ -0.95
PDLIM5-209ENST00000506632 AMACRQ9UHK6 382 aa9.1□□□□□ -0.95
PDLIM5-209ENST00000506632 PHTF1Q9UMS5 762 aa9.1□□□□□ -0.95
PDLIM5-209ENST00000506632 CLCA2Q9UQC9 943 aa9.1□□□□□ -0.95
PDLIM5-209ENST00000506632 RAXQ9Y2V3 346 aa9.1□□□□□ -0.95
PDLIM5-209ENST00000506632 OR1A2Q9Y585 309 aa9.1□□□□□ -0.95
PDLIM5-209ENST00000506632 DGKBQ9Y6T7 804 aa9.1□□□□□ -0.95
PDLIM5-209ENST00000506632 ITPR1Q14643 2758 aa9.1□□□□□ -0.95
PDLIM5-209ENST00000506632 TMEM202A6NGA9 273 aa9.09□□□□□ -0.95
PDLIM5-209ENST00000506632 NPIPB15A6NHN6 443 aaPredicted RBP9.09□□□□□ -0.95
PDLIM5-209ENST00000506632 C3orf70A6NLC5 250 aaPredicted RBP9.09□□□□□ -0.95
PDLIM5-209ENST00000506632 PSMD11O00231 422 aa9.09□□□□□ -0.95
PDLIM5-209ENST00000506632 TNFRSF10CO14798 259 aa9.09□□□□□ -0.95
PDLIM5-209ENST00000506632 YY2O15391 372 aa9.09□□□□□ -0.95
PDLIM5-209ENST00000506632 RASGRP1O95267 797 aa9.09□□□□□ -0.95
PDLIM5-209ENST00000506632 MAP3K6O95382 1288 aa9.09□□□□□ -0.95
PDLIM5-209ENST00000506632 PCCBP05166 539 aa9.09□□□□□ -0.95
PDLIM5-209ENST00000506632 ANXA6P08133 673 aa9.09□□□□□ -0.95
PDLIM5-209ENST00000506632 TPM1P09493 284 aa9.09□□□□□ -0.95
PDLIM5-209ENST00000506632 KDELR1P24390 212 aa9.09□□□□□ -0.95
PDLIM5-209ENST00000506632 HTR1BP28222 390 aa9.09□□□□□ -0.95
PDLIM5-209ENST00000506632 VIPR1P32241 457 aa9.09□□□□□ -0.95
PDLIM5-209ENST00000506632 ARHGAP25P42331 645 aa9.09□□□□□ -0.95
PDLIM5-209ENST00000506632 SRP54P61011 504 aaKnown RBP9.09□□□□□ -0.95
PDLIM5-209ENST00000506632 GBE1Q04446 702 aa9.09□□□□□ -0.95
PDLIM5-209ENST00000506632 MESDQ14696 234 aa9.09□□□□□ -0.95
PDLIM5-209ENST00000506632 IFI16Q16666 785 aaKnown RBP9.09□□□□□ -0.95
PDLIM5-209ENST00000506632 CDKN3Q16667 212 aa9.09□□□□□ -0.95
PDLIM5-209ENST00000506632 TSR1Q2NL82 804 aaKnown RBP9.09□□□□□ -0.95
PDLIM5-209ENST00000506632 ARMC12Q5T9G4 340 aa9.09□□□□□ -0.95
PDLIM5-209ENST00000506632 FAXCQ5TGI0 409 aa9.09□□□□□ -0.95
PDLIM5-209ENST00000506632 LRRC38Q5VT99 294 aa9.09□□□□□ -0.95
PDLIM5-209ENST00000506632 TIGD7Q6NT04 549 aaPredicted RBP9.09□□□□□ -0.95
PDLIM5-209ENST00000506632 PNCKQ6P2M8 343 aa9.09□□□□□ -0.95
PDLIM5-209ENST00000506632 GUSBP11Q6P575 273 aa9.09□□□□□ -0.95
PDLIM5-209ENST00000506632 LVRNQ6Q4G3 990 aa9.09□□□□□ -0.95
PDLIM5-209ENST00000506632 ENPP7Q6UWV6 458 aa9.09□□□□□ -0.95
PDLIM5-209ENST00000506632 HID1Q8IV36 788 aa9.09□□□□□ -0.95
PDLIM5-209ENST00000506632 CNGA4Q8IV77 575 aa9.09□□□□□ -0.95
PDLIM5-209ENST00000506632 PLD5Q8N7P1 536 aa9.09□□□□□ -0.95
PDLIM5-209ENST00000506632 ATL2Q8NHH9 583 aa9.09□□□□□ -0.95
PDLIM5-209ENST00000506632 ARRDC2Q8TBH0 407 aa9.09□□□□□ -0.95
PDLIM5-209ENST00000506632 IFI44Q8TCB0 444 aa9.09□□□□□ -0.95
PDLIM5-209ENST00000506632 TSACCQ96A04 125 aaPredicted RBP9.09□□□□□ -0.95
PDLIM5-209ENST00000506632 FUBP1Q96AE4 644 aaKnown RBP9.09□□□□□ -0.95
PDLIM5-209ENST00000506632 HDAC11Q96DB2 347 aa9.09□□□□□ -0.95
PDLIM5-209ENST00000506632 PDXPQ96GD0 296 aa9.09□□□□□ -0.95
PDLIM5-209ENST00000506632 POM121Q96HA1 1249 aa9.09□□□□□ -0.95
PDLIM5-209ENST00000506632 CCDC42Q96M95 316 aa9.09□□□□□ -0.95
PDLIM5-209ENST00000506632 RNF157Q96PX1 679 aa9.09□□□□□ -0.95
PDLIM5-209ENST00000506632 RBM15Q96T37 977 aaKnown RBP eCLIP9.09□□□□□ -0.95
PDLIM5-209ENST00000506632 SEMA3CQ99985 751 aa9.09□□□□□ -0.95
PDLIM5-209ENST00000506632 TMUB1Q9BVT8 246 aa9.09□□□□□ -0.95
PDLIM5-209ENST00000506632 POLR1EQ9GZS1 481 aaKnown RBP9.09□□□□□ -0.95
PDLIM5-209ENST00000506632 FGF22Q9HCT0 170 aa9.09□□□□□ -0.95
PDLIM5-209ENST00000506632 KCTD5Q9NXV2 234 aa9.09□□□□□ -0.95
PDLIM5-209ENST00000506632 DTLQ9NZJ0 730 aa9.09□□□□□ -0.95
PDLIM5-209ENST00000506632 KLQ9UEF7 1012 aa9.09□□□□□ -0.95
PDLIM5-209ENST00000506632 INTUQ9ULD6 942 aa9.09□□□□□ -0.95
PDLIM5-209ENST00000506632 CACNA1GO43497 2377 aa9.08□□□□□ -0.96
PDLIM5-209ENST00000506632 ADAMTS20P59510 1910 aa9.08□□□□□ -0.96
PDLIM5-209ENST00000506632 A0A087WV48 116 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms