RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 CSTF2P33240 577 aaKnown RBP eCLIP8.28□□□□□ -1.08
SNF8-204ENST00000506104 RFC1P35251 1148 aaPredicted RBP8.28□□□□□ -1.08
SNF8-204ENST00000506104 PTPN9P43378 593 aa8.28□□□□□ -1.08
SNF8-204ENST00000506104 PAPOLAP51003 745 aaKnown RBP8.28□□□□□ -1.08
SNF8-204ENST00000506104 SCNN1BP51168 640 aa8.28□□□□□ -1.08
SNF8-204ENST00000506104 SUOXP51687 545 aa8.28□□□□□ -1.08
SNF8-204ENST00000506104 YBEYP58557 167 aaPredicted RBP8.28□□□□□ -1.08
SNF8-204ENST00000506104 CDR2Q01850 454 aa8.28□□□□□ -1.08
SNF8-204ENST00000506104 NRG1Q02297 640 aaPredicted RBP8.28□□□□□ -1.08
SNF8-204ENST00000506104 ILF3Q12906 894 aaKnown RBP eCLIP8.28□□□□□ -1.08
SNF8-204ENST00000506104 SERINC3Q13530 473 aa8.28□□□□□ -1.08
SNF8-204ENST00000506104 GRM3Q14832 879 aa8.28□□□□□ -1.08
SNF8-204ENST00000506104 INO80DQ53TQ3 878 aaPredicted RBP8.28□□□□□ -1.08
SNF8-204ENST00000506104 MIIPQ5JXC2 388 aa8.28□□□□□ -1.08
SNF8-204ENST00000506104 FKBP15Q5T1M5 1219 aa8.28□□□□□ -1.08
SNF8-204ENST00000506104 MANEALQ5VSG8 457 aa8.28□□□□□ -1.08
SNF8-204ENST00000506104 BORAQ6PGQ7 559 aa8.28□□□□□ -1.08
SNF8-204ENST00000506104 WDR59Q6PJI9 974 aa8.28□□□□□ -1.08
SNF8-204ENST00000506104 STRADAQ7RTN6 431 aa8.28□□□□□ -1.08
SNF8-204ENST00000506104 TMPRSS9Q7Z410 1059 aa8.28□□□□□ -1.08
SNF8-204ENST00000506104 KDELC2Q7Z4H8 507 aa8.28□□□□□ -1.08
SNF8-204ENST00000506104 ZSWIM9Q86XI8 627 aa8.28□□□□□ -1.08
SNF8-204ENST00000506104 CCDC112Q8NEF3 446 aa8.28□□□□□ -1.08
SNF8-204ENST00000506104 GPR156Q8NFN8 814 aa8.28□□□□□ -1.08
SNF8-204ENST00000506104 HTR3CQ8WXA8 447 aa8.28□□□□□ -1.08
SNF8-204ENST00000506104 ART4Q93070 314 aa8.28□□□□□ -1.08
SNF8-204ENST00000506104 TMEM159Q96B96 161 aa8.28□□□□□ -1.08
SNF8-204ENST00000506104 NUS1Q96E22 293 aa8.28□□□□□ -1.08
SNF8-204ENST00000506104 MCEEQ96PE7 176 aa8.28□□□□□ -1.08
SNF8-204ENST00000506104 NUDT22Q9BRQ3 303 aa8.28□□□□□ -1.08
SNF8-204ENST00000506104 LGR4Q9BXB1 951 aa8.28□□□□□ -1.08
SNF8-204ENST00000506104 GSDMCQ9BYG8 508 aa8.28□□□□□ -1.08
SNF8-204ENST00000506104 STK33Q9BYT3 514 aa8.28□□□□□ -1.08
SNF8-204ENST00000506104 SLC25A18Q9H1K4 315 aa8.28□□□□□ -1.08
SNF8-204ENST00000506104 DHX35Q9H5Z1 703 aaKnown RBP8.28□□□□□ -1.08
SNF8-204ENST00000506104 NOL6Q9H6R4 1146 aaKnown RBP8.28□□□□□ -1.08
SNF8-204ENST00000506104 PHPT1Q9NRX4 125 aaPredicted RBP8.28□□□□□ -1.08
SNF8-204ENST00000506104 SAMSN1Q9NSI8 373 aaKnown RBP8.28□□□□□ -1.08
SNF8-204ENST00000506104 SPATS2LQ9NUQ6 558 aaKnown RBP8.28□□□□□ -1.08
SNF8-204ENST00000506104 SLC39A1Q9NY26 324 aa8.28□□□□□ -1.08
SNF8-204ENST00000506104 DACH1Q9UI36 760 aa8.28□□□□□ -1.08
SNF8-204ENST00000506104 A0A1W2PQC6 194 aa8.27□□□□□ -1.09
SNF8-204ENST00000506104 PRSS38A1L453 326 aa8.27□□□□□ -1.09
SNF8-204ENST00000506104 EFCAB7A8K855 629 aa8.27□□□□□ -1.09
SNF8-204ENST00000506104 TMCO5BA8MYB1 307 aa8.27□□□□□ -1.09
SNF8-204ENST00000506104 PDE2AO00408 941 aaPredicted RBP8.27□□□□□ -1.09
SNF8-204ENST00000506104 TERTO14746 1132 aaKnown RBP8.27□□□□□ -1.09
SNF8-204ENST00000506104 B4GAT1O43505 415 aa8.27□□□□□ -1.09
SNF8-204ENST00000506104 ECEL1O95672 775 aa8.27□□□□□ -1.09
SNF8-204ENST00000506104 CALB1P05937 261 aa8.27□□□□□ -1.09
SNF8-204ENST00000506104 LIFP15018 202 aa8.27□□□□□ -1.09
SNF8-204ENST00000506104 CHRNB2P17787 502 aa8.27□□□□□ -1.09
SNF8-204ENST00000506104 MMP8P22894 467 aa8.27□□□□□ -1.09
SNF8-204ENST00000506104 SOX5P35711 763 aa8.27□□□□□ -1.09
SNF8-204ENST00000506104 MMP12P39900 470 aa8.27□□□□□ -1.09
SNF8-204ENST00000506104 STAT1P42224 750 aa8.27□□□□□ -1.09
SNF8-204ENST00000506104 CCR10P46092 362 aa8.27□□□□□ -1.09
SNF8-204ENST00000506104 RGRP47804 291 aa8.27□□□□□ -1.09
SNF8-204ENST00000506104 KIAA1024LP59773 190 aa8.27□□□□□ -1.09
SNF8-204ENST00000506104 FMO1Q01740 532 aa8.27□□□□□ -1.09
SNF8-204ENST00000506104 ZFP36L1Q07352 338 aaKnown RBP8.27□□□□□ -1.09
SNF8-204ENST00000506104 KCNAB2Q13303 367 aa8.27□□□□□ -1.09
SNF8-204ENST00000506104 HLTFQ14527 1009 aaKnown RBP eCLIP8.27□□□□□ -1.09
SNF8-204ENST00000506104 IGFBP7Q16270 282 aa8.27□□□□□ -1.09
SNF8-204ENST00000506104 TSR1Q2NL82 804 aaKnown RBP8.27□□□□□ -1.09
SNF8-204ENST00000506104 DPCR1Q3MIW9 517 aa8.27□□□□□ -1.09
SNF8-204ENST00000506104 PARP15Q460N3 678 aa8.27□□□□□ -1.09
SNF8-204ENST00000506104 PPP6R3Q5H9R7 873 aaPredicted RBP8.27□□□□□ -1.09
SNF8-204ENST00000506104 ARTNQ5T4W7 220 aa8.27□□□□□ -1.09
SNF8-204ENST00000506104 RAET1GQ6H3X3 334 aa8.27□□□□□ -1.09
SNF8-204ENST00000506104 C16orf46Q6P387 395 aa8.27□□□□□ -1.09
SNF8-204ENST00000506104 BRAT1Q6PJG6 821 aa8.27□□□□□ -1.09
SNF8-204ENST00000506104 XKR5Q6UX68 686 aa8.27□□□□□ -1.09
SNF8-204ENST00000506104 LIPIQ6XZB0 460 aa8.27□□□□□ -1.09
SNF8-204ENST00000506104 TRIM72Q6ZMU5 477 aa8.27□□□□□ -1.09
SNF8-204ENST00000506104 MARK2Q7KZI7 788 aaKnown RBP8.27□□□□□ -1.09
SNF8-204ENST00000506104 ZNF761Q86XN6 746 aaPredicted RBP8.27□□□□□ -1.09
SNF8-204ENST00000506104 ZNF677Q86XU0 584 aa8.27□□□□□ -1.09
SNF8-204ENST00000506104 CACNA2D3Q8IZS8 1091 aa8.27□□□□□ -1.09
SNF8-204ENST00000506104 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.27□□□□□ -1.09
SNF8-204ENST00000506104 TSEN2Q8NCE0 465 aaKnown RBP8.27□□□□□ -1.09
SNF8-204ENST00000506104 PATE1Q8WXA2 126 aa8.27□□□□□ -1.09
SNF8-204ENST00000506104 PMEPA1Q969W9 287 aa8.27□□□□□ -1.09
SNF8-204ENST00000506104 KIAA1143Q96AT1 154 aaPredicted RBP8.27□□□□□ -1.09
SNF8-204ENST00000506104 ZNF641Q96N77 438 aaPredicted RBP8.27□□□□□ -1.09
SNF8-204ENST00000506104 TAAR9Q96RI9 348 aa8.27□□□□□ -1.09
SNF8-204ENST00000506104 CTRCQ99895 268 aa8.27□□□□□ -1.09
SNF8-204ENST00000506104 SLC39A8Q9C0K1 460 aa8.27□□□□□ -1.09
SNF8-204ENST00000506104 PLSCR2Q9NRY7 297 aa8.27□□□□□ -1.09
SNF8-204ENST00000506104 KCNK4Q9NYG8 393 aa8.27□□□□□ -1.09
SNF8-204ENST00000506104 TAAR2Q9P1P5 351 aa8.27□□□□□ -1.09
SNF8-204ENST00000506104 KLHL3Q9UH77 587 aa8.27□□□□□ -1.09
SNF8-204ENST00000506104 PCSK1NQ9UHG2 260 aa8.27□□□□□ -1.09
SNF8-204ENST00000506104 NOCTQ9UK39 431 aaKnown RBP8.27□□□□□ -1.09
SNF8-204ENST00000506104 APPL1Q9UKG1 709 aa8.27□□□□□ -1.09
SNF8-204ENST00000506104 FZD10Q9ULW2 581 aa8.27□□□□□ -1.09
SNF8-204ENST00000506104 MFHAS1Q9Y4C4 1052 aa8.27□□□□□ -1.09
SNF8-204ENST00000506104 DGKBQ9Y6T7 804 aa8.27□□□□□ -1.09
SNF8-204ENST00000506104 CFAP46Q8IYW2 2715 aa8.27□□□□□ -1.09
SNF8-204ENST00000506104 NAV2Q8IVL1 2488 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms