RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 TC2NQ8N9U0 490 aa10.47□□□□□ -0.73
NR1I3-222ENST00000506018 KCTD6Q8NC69 237 aa10.47□□□□□ -0.73
NR1I3-222ENST00000506018 OR6C4Q8NGE1 309 aa10.47□□□□□ -0.73
NR1I3-222ENST00000506018 HNRNPLLQ8WVV9 542 aaKnown RBP10.47□□□□□ -0.73
NR1I3-222ENST00000506018 WDR92Q96MX6 357 aa10.47□□□□□ -0.73
NR1I3-222ENST00000506018 NUDCD1Q96RS6 583 aa10.47□□□□□ -0.73
NR1I3-222ENST00000506018 BAG1Q99933 345 aaPredicted RBP10.47□□□□□ -0.73
NR1I3-222ENST00000506018 LRRC61Q9BV99 259 aa10.47□□□□□ -0.73
NR1I3-222ENST00000506018 BOCQ9BWV1 1114 aa10.47□□□□□ -0.73
NR1I3-222ENST00000506018 PCDH18Q9HCL0 1135 aa10.47□□□□□ -0.73
NR1I3-222ENST00000506018 KLF15Q9UIH9 416 aa10.47□□□□□ -0.73
NR1I3-222ENST00000506018 ZZEF1O43149 2961 aa10.46□□□□□ -0.73
NR1I3-222ENST00000506018 TRAFD1O14545 582 aaPredicted RBP10.46□□□□□ -0.74
NR1I3-222ENST00000506018 MUSKO15146 869 aa10.46□□□□□ -0.74
NR1I3-222ENST00000506018 CSO75390 466 aaKnown RBP10.46□□□□□ -0.74
NR1I3-222ENST00000506018 TCEA3O75764 348 aa10.46□□□□□ -0.74
NR1I3-222ENST00000506018 RECQL5O94762 991 aaPredicted RBP10.46□□□□□ -0.74
NR1I3-222ENST00000506018 CPP00450 1065 aa10.46□□□□□ -0.74
NR1I3-222ENST00000506018 TSHRP16473 764 aa10.46□□□□□ -0.74
NR1I3-222ENST00000506018 CA4P22748 312 aa10.46□□□□□ -0.74
NR1I3-222ENST00000506018 DEKP35659 375 aaKnown RBP10.46□□□□□ -0.74
NR1I3-222ENST00000506018 KIAA1024LP59773 190 aa10.46□□□□□ -0.74
NR1I3-222ENST00000506018 SRP54P61011 504 aaKnown RBP10.46□□□□□ -0.74
NR1I3-222ENST00000506018 SLC25A11Q02978 314 aaKnown RBP10.46□□□□□ -0.74
NR1I3-222ENST00000506018 ITKQ08881 620 aa10.46□□□□□ -0.74
NR1I3-222ENST00000506018 C1orf61Q13536 156 aa10.46□□□□□ -0.74
NR1I3-222ENST00000506018 PDK2Q15119 407 aa10.46□□□□□ -0.74
NR1I3-222ENST00000506018 COL28A1Q2UY09 1125 aa10.46□□□□□ -0.74
NR1I3-222ENST00000506018 TPRG1LQ5T0D9 272 aa10.46□□□□□ -0.74
NR1I3-222ENST00000506018 CDCP2Q5VXM1 449 aa10.46□□□□□ -0.74
NR1I3-222ENST00000506018 LIPIQ6XZB0 460 aa10.46□□□□□ -0.74
NR1I3-222ENST00000506018 RBM44Q6ZP01 1051 aaKnown RBP10.46□□□□□ -0.74
NR1I3-222ENST00000506018 USP45Q70EL2 814 aa10.46□□□□□ -0.74
NR1I3-222ENST00000506018 TXLNBQ8N3L3 684 aa10.46□□□□□ -0.74
NR1I3-222ENST00000506018 ARL10Q8N8L6 244 aa10.46□□□□□ -0.74
NR1I3-222ENST00000506018 FGF11Q92914 225 aa10.46□□□□□ -0.74
NR1I3-222ENST00000506018 BTBD6Q96KE9 485 aa10.46□□□□□ -0.74
NR1I3-222ENST00000506018 CCDC42Q96M95 316 aa10.46□□□□□ -0.74
NR1I3-222ENST00000506018 ZNF830Q96NB3 372 aaPredicted RBP10.46□□□□□ -0.74
NR1I3-222ENST00000506018 MGME1Q9BQP7 344 aa10.46□□□□□ -0.74
NR1I3-222ENST00000506018 POLR1EQ9GZS1 481 aaKnown RBP10.46□□□□□ -0.74
NR1I3-222ENST00000506018 WDR26Q9H7D7 661 aa10.46□□□□□ -0.74
NR1I3-222ENST00000506018 LUC7LQ9NQ29 371 aaKnown RBP10.46□□□□□ -0.74
NR1I3-222ENST00000506018 PHTF1Q9UMS5 762 aa10.46□□□□□ -0.74
NR1I3-222ENST00000506018 DSPP15924 2871 aaKnown RBP10.46□□□□□ -0.74
NR1I3-222ENST00000506018 PSMD11O00231 422 aa10.45□□□□□ -0.74
NR1I3-222ENST00000506018 SNPHO15079 494 aa10.45□□□□□ -0.74
NR1I3-222ENST00000506018 YY2O15391 372 aa10.45□□□□□ -0.74
NR1I3-222ENST00000506018 ARHGAP6O43182 974 aa10.45□□□□□ -0.74
NR1I3-222ENST00000506018 AKR1B10O60218 316 aa10.45□□□□□ -0.74
NR1I3-222ENST00000506018 BRINP1O60477 761 aa10.45□□□□□ -0.74
NR1I3-222ENST00000506018 MAFKO60675 156 aa10.45□□□□□ -0.74
NR1I3-222ENST00000506018 USP12O75317 370 aa10.45□□□□□ -0.74
NR1I3-222ENST00000506018 GCATO75600 419 aa10.45□□□□□ -0.74
NR1I3-222ENST00000506018 PRKCGP05129 697 aa10.45□□□□□ -0.74
NR1I3-222ENST00000506018 HOXC4P09017 264 aaPredicted RBP10.45□□□□□ -0.74
NR1I3-222ENST00000506018 MX2P20592 715 aa10.45□□□□□ -0.74
NR1I3-222ENST00000506018 CES1P23141 567 aa10.45□□□□□ -0.74
NR1I3-222ENST00000506018 VIPR1P32241 457 aa10.45□□□□□ -0.74
NR1I3-222ENST00000506018 CYLC1P35663 651 aaPredicted RBP10.45□□□□□ -0.74
NR1I3-222ENST00000506018 GJC1P36383 396 aa10.45□□□□□ -0.74
NR1I3-222ENST00000506018 RALGDSQ12967 914 aa10.45□□□□□ -0.74
NR1I3-222ENST00000506018 PEX6Q13608 980 aa10.45□□□□□ -0.74
NR1I3-222ENST00000506018 SPIDRQ14159 915 aa10.45□□□□□ -0.74
NR1I3-222ENST00000506018 SLC18A3Q16572 532 aa10.45□□□□□ -0.74
NR1I3-222ENST00000506018 ALG11Q2TAA5 492 aa10.45□□□□□ -0.74
NR1I3-222ENST00000506018 TBC1D25Q3MII6 688 aa10.45□□□□□ -0.74
NR1I3-222ENST00000506018 ODF2Q5BJF6 829 aa10.45□□□□□ -0.74
NR1I3-222ENST00000506018 ARMC12Q5T9G4 340 aa10.45□□□□□ -0.74
NR1I3-222ENST00000506018 GUSBP11Q6P575 273 aa10.45□□□□□ -0.74
NR1I3-222ENST00000506018 PDZD3Q86UT5 571 aa10.45□□□□□ -0.74
NR1I3-222ENST00000506018 ZSWIM9Q86XI8 627 aa10.45□□□□□ -0.74
NR1I3-222ENST00000506018 CCDC170Q8IYT3 715 aa10.45□□□□□ -0.74
NR1I3-222ENST00000506018 OR56A4Q8NGH8 313 aa10.45□□□□□ -0.74
NR1I3-222ENST00000506018 SNIP1Q8TAD8 396 aaKnown RBP10.45□□□□□ -0.74
NR1I3-222ENST00000506018 TSACCQ96A04 125 aaPredicted RBP10.45□□□□□ -0.74
NR1I3-222ENST00000506018 NUS1Q96E22 293 aa10.45□□□□□ -0.74
NR1I3-222ENST00000506018 ZNF578Q96N58 590 aaPredicted RBP10.45□□□□□ -0.74
NR1I3-222ENST00000506018 ZNF670Q9BS34 389 aa10.45□□□□□ -0.74
NR1I3-222ENST00000506018 TCEAL2Q9H3H9 227 aaPredicted RBP10.45□□□□□ -0.74
NR1I3-222ENST00000506018 PHPT1Q9NRX4 125 aaPredicted RBP10.45□□□□□ -0.74
NR1I3-222ENST00000506018 GULP1Q9UBP9 304 aa10.45□□□□□ -0.74
NR1I3-222ENST00000506018 B4GALT6Q9UBX8 382 aa10.45□□□□□ -0.74
NR1I3-222ENST00000506018 AMACRQ9UHK6 382 aa10.45□□□□□ -0.74
NR1I3-222ENST00000506018 MOSPD1Q9UJG1 213 aa10.45□□□□□ -0.74
NR1I3-222ENST00000506018 DNPEPQ9ULA0 475 aa10.45□□□□□ -0.74
NR1I3-222ENST00000506018 PADI4Q9UM07 663 aa10.45□□□□□ -0.74
NR1I3-222ENST00000506018 GPR34Q9UPC5 381 aa10.45□□□□□ -0.74
NR1I3-222ENST00000506018 OR1A2Q9Y585 309 aa10.45□□□□□ -0.74
NR1I3-222ENST00000506018 DGKBQ9Y6T7 804 aa10.45□□□□□ -0.74
NR1I3-222ENST00000506018 ARHGEF17Q96PE2 2063 aaPredicted RBP10.45□□□□□ -0.74
NR1I3-222ENST00000506018 CACNA1GO43497 2377 aa10.45□□□□□ -0.74
NR1I3-222ENST00000506018 UNC13CQ8NB66 2214 aa10.45□□□□□ -0.74
NR1I3-222ENST00000506018 LY6G6EA0A0G2JKS1 128 aa10.44□□□□□ -0.74
NR1I3-222ENST00000506018 SSU72P8A0A1W2PR75 194 aa10.44□□□□□ -0.74
NR1I3-222ENST00000506018 EIF4E1BA6NMX2 242 aaKnown RBP10.44□□□□□ -0.74
NR1I3-222ENST00000506018 A8MX80 341 aa10.44□□□□□ -0.74
NR1I3-222ENST00000506018 TMX2-CTNND1H3BSU7 103 aa10.44□□□□□ -0.74
NR1I3-222ENST00000506018 TNFRSF10CO14798 259 aa10.44□□□□□ -0.74
NR1I3-222ENST00000506018 ZW10O43264 779 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms