RNA–Protein interactions for RNA: ENST00000505073.5

CCSER1-205, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-205ENST00000505073 TRIM73Q86UV7 250 aa13.29□□□□□ -0.28
CCSER1-205ENST00000505073 WDR75Q8IWA0 830 aaKnown RBP13.29□□□□□ -0.28
CCSER1-205ENST00000505073 RBM12BQ8IXT5 1001 aaKnown RBP13.29□□□□□ -0.28
CCSER1-205ENST00000505073 TEX26Q8N6G2 289 aa13.29□□□□□ -0.28
CCSER1-205ENST00000505073 SPPL3Q8TCT6 385 aa13.29□□□□□ -0.28
CCSER1-205ENST00000505073 ACTRT2Q8TDY3 377 aa13.29□□□□□ -0.28
CCSER1-205ENST00000505073 FATE1Q969F0 183 aa13.29□□□□□ -0.28
CCSER1-205ENST00000505073 IMP4Q96G21 291 aaKnown RBP13.29□□□□□ -0.28
CCSER1-205ENST00000505073 CERS2Q96G23 380 aa13.29□□□□□ -0.28
CCSER1-205ENST00000505073 CORO1BQ9BR76 489 aa13.29□□□□□ -0.28
CCSER1-205ENST00000505073 IL22Q9GZX6 179 aa13.29□□□□□ -0.28
CCSER1-205ENST00000505073 CIDEBQ9UHD4 219 aa13.29□□□□□ -0.28
CCSER1-205ENST00000505073 ZCWPW2A0A1B0GU75 182 aa13.29□□□□□ -0.28
CCSER1-205ENST00000505073 A0A1W2PRU2 124 aa13.29□□□□□ -0.28
CCSER1-205ENST00000505073 HMX2A2RU54 273 aa13.29□□□□□ -0.28
CCSER1-205ENST00000505073 MUSKO15146 869 aa13.29□□□□□ -0.28
CCSER1-205ENST00000505073 HNRNPRO43390 633 aaKnown RBP13.29□□□□□ -0.28
CCSER1-205ENST00000505073 KRT38O76015 456 aa13.29□□□□□ -0.28
CCSER1-205ENST00000505073 GLUD1P00367 558 aa13.29□□□□□ -0.28
CCSER1-205ENST00000505073 MMP2P08253 660 aa13.29□□□□□ -0.28
CCSER1-205ENST00000505073 HOXD9P28356 352 aaPredicted RBP13.29□□□□□ -0.28
CCSER1-205ENST00000505073 FOLH1Q04609 750 aa13.29□□□□□ -0.28
CCSER1-205ENST00000505073 B3GNT6Q6ZMB0 384 aa13.29□□□□□ -0.28
CCSER1-205ENST00000505073 CCDC149Q6ZUS6 474 aa13.29□□□□□ -0.28
CCSER1-205ENST00000505073 POU5F2Q8N7G0 328 aa13.29□□□□□ -0.28
CCSER1-205ENST00000505073 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.29□□□□□ -0.28
CCSER1-205ENST00000505073 MRPS31Q92665 395 aaKnown RBP13.29□□□□□ -0.28
CCSER1-205ENST00000505073 BHMTQ93088 406 aa13.29□□□□□ -0.28
CCSER1-205ENST00000505073 CCDC124Q96CT7 223 aaKnown RBP13.29□□□□□ -0.28
CCSER1-205ENST00000505073 EMILIN2Q9BXX0 1053 aa13.29□□□□□ -0.28
CCSER1-205ENST00000505073 HCFC1R1Q9NWW0 138 aa13.29□□□□□ -0.28
CCSER1-205ENST00000505073 CHD5Q8TDI0 1954 aa13.29□□□□□ -0.28
CCSER1-205ENST00000505073 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.28□□□□□ -0.28
CCSER1-205ENST00000505073 LINC01553A4QN01 128 aa13.28□□□□□ -0.28
CCSER1-205ENST00000505073 VILLO15195 856 aa13.28□□□□□ -0.28
CCSER1-205ENST00000505073 CLDN11O75508 207 aa13.28□□□□□ -0.28
CCSER1-205ENST00000505073 SORBS2O94875 1100 aaKnown RBP13.28□□□□□ -0.28
CCSER1-205ENST00000505073 CKMP06732 381 aa13.28□□□□□ -0.28
CCSER1-205ENST00000505073 RHOCP08134 193 aa13.28□□□□□ -0.28
CCSER1-205ENST00000505073 CRHR1P34998 444 aa13.28□□□□□ -0.28
CCSER1-205ENST00000505073 IRS1P35568 1242 aa13.28□□□□□ -0.28
CCSER1-205ENST00000505073 RPL5P46777 297 aaKnown RBP13.28□□□□□ -0.28
CCSER1-205ENST00000505073 ZNF177Q13360 481 aaPredicted RBP13.28□□□□□ -0.28
CCSER1-205ENST00000505073 DBN1Q16643 649 aa13.28□□□□□ -0.28
CCSER1-205ENST00000505073 PACS1Q6VY07 963 aa13.28□□□□□ -0.28
CCSER1-205ENST00000505073 MRPL43Q8N983 215 aaKnown RBP13.28□□□□□ -0.28
CCSER1-205ENST00000505073 LZICQ8WZA0 190 aa13.28□□□□□ -0.28
CCSER1-205ENST00000505073 CDKL2Q92772 493 aa13.28□□□□□ -0.28
CCSER1-205ENST00000505073 MAGEH1Q9H213 219 aa13.28□□□□□ -0.28
CCSER1-205ENST00000505073 PDFQ9HBH1 243 aa13.28□□□□□ -0.28
CCSER1-205ENST00000505073 GRXCR1A8MXD5 290 aa13.28□□□□□ -0.28
CCSER1-205ENST00000505073 GOLGA8TH3BQL2 631 aa13.28□□□□□ -0.28
CCSER1-205ENST00000505073 GREM1O60565 184 aa13.28□□□□□ -0.28
CCSER1-205ENST00000505073 OLFM2O95897 454 aa13.28□□□□□ -0.28
CCSER1-205ENST00000505073 HPCAP84074 193 aa13.28□□□□□ -0.28
CCSER1-205ENST00000505073 MPP3Q13368 585 aa13.28□□□□□ -0.28
CCSER1-205ENST00000505073 GRAMD1BQ3KR37 738 aa13.28□□□□□ -0.28
CCSER1-205ENST00000505073 RANBP10Q6VN20 620 aa13.28□□□□□ -0.28
CCSER1-205ENST00000505073 RBM44Q6ZP01 1051 aaKnown RBP13.28□□□□□ -0.28
CCSER1-205ENST00000505073 NDUFAF2Q8N183 169 aa13.28□□□□□ -0.28
CCSER1-205ENST00000505073 MARVELD2Q8N4S9 558 aa13.28□□□□□ -0.28
CCSER1-205ENST00000505073 ARRDC2Q8TBH0 407 aa13.28□□□□□ -0.28
CCSER1-205ENST00000505073 PIWIL2Q8TC59 973 aaKnown RBP13.28□□□□□ -0.28
CCSER1-205ENST00000505073 AGAP2Q99490 1192 aa13.28□□□□□ -0.28
CCSER1-205ENST00000505073 APOBEC2Q9Y235 224 aaKnown RBP13.28□□□□□ -0.28
CCSER1-205ENST00000505073 POMPQ9Y244 141 aa13.28□□□□□ -0.28
CCSER1-205ENST00000505073 MYLKQ15746 1914 aa13.27□□□□□ -0.28
CCSER1-205ENST00000505073 A0A1B0GVM2 712 aa13.27□□□□□ -0.28
CCSER1-205ENST00000505073 TCAF2A6NFQ2 919 aa13.27□□□□□ -0.28
CCSER1-205ENST00000505073 H3BNX3 289 aa13.27□□□□□ -0.28
CCSER1-205ENST00000505073 TBL1XO60907 577 aa13.27□□□□□ -0.28
CCSER1-205ENST00000505073 RFPL2O75678 378 aa13.27□□□□□ -0.28
CCSER1-205ENST00000505073 PROCP04070 461 aa13.27□□□□□ -0.28
CCSER1-205ENST00000505073 TBL3Q12788 808 aaKnown RBP13.27□□□□□ -0.28
CCSER1-205ENST00000505073 ZNF235Q14590 738 aa13.27□□□□□ -0.28
CCSER1-205ENST00000505073 HSP90AA5PQ58FG0 334 aa13.27□□□□□ -0.28
CCSER1-205ENST00000505073 OGFRL1Q5TC84 451 aaPredicted RBP13.27□□□□□ -0.28
CCSER1-205ENST00000505073 PPP1R14CQ8TAE6 165 aa13.27□□□□□ -0.28
CCSER1-205ENST00000505073 PHOSPHO2Q8TCD6 241 aa13.27□□□□□ -0.28
CCSER1-205ENST00000505073 MIPOL1Q8TD10 442 aa13.27□□□□□ -0.28
CCSER1-205ENST00000505073 SEMA3CQ99985 751 aa13.27□□□□□ -0.28
CCSER1-205ENST00000505073 SMG9Q9H0W8 520 aaKnown RBP13.27□□□□□ -0.28
CCSER1-205ENST00000505073 ATP13A1Q9HD20 1204 aa13.27□□□□□ -0.28
CCSER1-205ENST00000505073 TLR9Q9NR96 1032 aa13.27□□□□□ -0.28
CCSER1-205ENST00000505073 DNAJC16Q9Y2G8 782 aa13.27□□□□□ -0.28
CCSER1-205ENST00000505073 DTNAQ9Y4J8 743 aa13.27□□□□□ -0.28
CCSER1-205ENST00000505073 MIA3Q5JRA6 1907 aa13.27□□□□□ -0.28
CCSER1-205ENST00000505073 MAGEB16A2A368 324 aa13.27□□□□□ -0.29
CCSER1-205ENST00000505073 SIN3BO75182 1162 aa13.27□□□□□ -0.29
CCSER1-205ENST00000505073 CCR2P41597 374 aa13.27□□□□□ -0.29
CCSER1-205ENST00000505073 OXCT1P55809 520 aa13.27□□□□□ -0.29
CCSER1-205ENST00000505073 PPM1LQ5SGD2 360 aa13.27□□□□□ -0.29
CCSER1-205ENST00000505073 RNF219Q5W0B1 726 aaPredicted RBP13.27□□□□□ -0.29
CCSER1-205ENST00000505073 CXorf57Q6NSI4 855 aaKnown RBP13.27□□□□□ -0.29
CCSER1-205ENST00000505073 ELMOD1Q8N336 334 aa13.27□□□□□ -0.29
CCSER1-205ENST00000505073 CARNMT1Q8N4J0 409 aa13.27□□□□□ -0.29
CCSER1-205ENST00000505073 HIPK4Q8NE63 616 aa13.27□□□□□ -0.29
CCSER1-205ENST00000505073 ATP2A3Q93084 1043 aa13.27□□□□□ -0.29
CCSER1-205ENST00000505073 PPP1R2P1Q96PQ5 205 aa13.27□□□□□ -0.29
CCSER1-205ENST00000505073 GCNAQ96QF7 691 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms