RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 EPHB2P29323 1055 aa6.92□□□□□ -1.3
NPIPB3-203ENST00000504841 OAS2P29728 719 aaKnown RBP6.92□□□□□ -1.3
NPIPB3-203ENST00000504841 CSF2RBP32927 897 aa6.92□□□□□ -1.3
NPIPB3-203ENST00000504841 ADRA1BP35368 520 aa6.92□□□□□ -1.3
NPIPB3-203ENST00000504841 SCNN1AP37088 669 aa6.92□□□□□ -1.3
NPIPB3-203ENST00000504841 MMP12P39900 470 aa6.92□□□□□ -1.3
NPIPB3-203ENST00000504841 GNPDA1P46926 289 aa6.92□□□□□ -1.3
NPIPB3-203ENST00000504841 MLLT10P55197 1068 aa6.92□□□□□ -1.3
NPIPB3-203ENST00000504841 KIAA1024LP59773 190 aa6.92□□□□□ -1.3
NPIPB3-203ENST00000504841 CDC20Q12834 499 aa6.92□□□□□ -1.3
NPIPB3-203ENST00000504841 ILF3Q12906 894 aaKnown RBP eCLIP6.92□□□□□ -1.3
NPIPB3-203ENST00000504841 UGP2Q16851 508 aa6.92□□□□□ -1.3
NPIPB3-203ENST00000504841 DEFB109BQ30KR1 87 aa6.92□□□□□ -1.3
NPIPB3-203ENST00000504841 LACTB2Q53H82 288 aaPredicted RBP6.92□□□□□ -1.3
NPIPB3-203ENST00000504841 SNAP47Q5SQN1 464 aa6.92□□□□□ -1.3
NPIPB3-203ENST00000504841 ATP1A1-AS1Q5TC04 95 aa6.92□□□□□ -1.3
NPIPB3-203ENST00000504841 NAA35Q5VZE5 725 aa6.92□□□□□ -1.3
NPIPB3-203ENST00000504841 OGFOD3Q6PK18 319 aa6.92□□□□□ -1.3
NPIPB3-203ENST00000504841 SLC30A9Q6PML9 568 aa6.92□□□□□ -1.3
NPIPB3-203ENST00000504841 CLEC18BQ6UXF7 455 aa6.92□□□□□ -1.3
NPIPB3-203ENST00000504841 NLRP14Q86W24 1093 aa6.92□□□□□ -1.3
NPIPB3-203ENST00000504841 ATCAYQ86WG3 371 aa6.92□□□□□ -1.3
NPIPB3-203ENST00000504841 ZNF761Q86XN6 746 aaPredicted RBP6.92□□□□□ -1.3
NPIPB3-203ENST00000504841 CCDC185Q8N715 623 aa6.92□□□□□ -1.3
NPIPB3-203ENST00000504841 CLEC18CQ8NCF0 446 aa6.92□□□□□ -1.3
NPIPB3-203ENST00000504841 MSANTD4Q8NCY6 345 aa6.92□□□□□ -1.3
NPIPB3-203ENST00000504841 AGBL5Q8NDL9 886 aa6.92□□□□□ -1.3
NPIPB3-203ENST00000504841 GPT2Q8TD30 523 aa6.92□□□□□ -1.3
NPIPB3-203ENST00000504841 GPBAR1Q8TDU6 330 aa6.92□□□□□ -1.3
NPIPB3-203ENST00000504841 ZDHHC1Q8WTX9 485 aa6.92□□□□□ -1.3
NPIPB3-203ENST00000504841 CPA5Q8WXQ8 436 aa6.92□□□□□ -1.3
NPIPB3-203ENST00000504841 ABHD17AQ96GS6 310 aa6.92□□□□□ -1.3
NPIPB3-203ENST00000504841 CATSPER2Q96P56 530 aa6.92□□□□□ -1.3
NPIPB3-203ENST00000504841 CTRCQ99895 268 aa6.92□□□□□ -1.3
NPIPB3-203ENST00000504841 LGR4Q9BXB1 951 aa6.92□□□□□ -1.3
NPIPB3-203ENST00000504841 WDR26Q9H7D7 661 aa6.92□□□□□ -1.3
NPIPB3-203ENST00000504841 CARS2Q9HA77 564 aaKnown RBP6.92□□□□□ -1.3
NPIPB3-203ENST00000504841 SPATS2LQ9NUQ6 558 aaKnown RBP6.92□□□□□ -1.3
NPIPB3-203ENST00000504841 OCIAD1Q9NX40 245 aa6.92□□□□□ -1.3
NPIPB3-203ENST00000504841 GOLGA6AQ9NYA3 693 aa6.92□□□□□ -1.3
NPIPB3-203ENST00000504841 TMEM9Q9P0T7 183 aa6.92□□□□□ -1.3
NPIPB3-203ENST00000504841 TUBD1Q9UJT1 453 aa6.92□□□□□ -1.3
NPIPB3-203ENST00000504841 TMEM59LQ9UK28 342 aa6.92□□□□□ -1.3
NPIPB3-203ENST00000504841 NEU3Q9UQ49 428 aa6.92□□□□□ -1.3
NPIPB3-203ENST00000504841 TP53TG5Q9Y2B4 290 aa6.92□□□□□ -1.3
NPIPB3-203ENST00000504841 PCDHGA3Q9Y5H0 932 aa6.92□□□□□ -1.3
NPIPB3-203ENST00000504841 TLN1Q9Y490 2541 aaKnown RBP6.92□□□□□ -1.3
NPIPB3-203ENST00000504841 CXorf51AA0A1B0GTR3 108 aa6.91□□□□□ -1.3
NPIPB3-203ENST00000504841 TSPAN11A1L157 253 aa6.91□□□□□ -1.3
NPIPB3-203ENST00000504841 RASA4BC9J798 803 aa6.91□□□□□ -1.3
NPIPB3-203ENST00000504841 ZW10O43264 779 aa6.91□□□□□ -1.3
NPIPB3-203ENST00000504841 RASA4O43374 803 aa6.91□□□□□ -1.3
NPIPB3-203ENST00000504841 CREB3O43889 395 aa6.91□□□□□ -1.3
NPIPB3-203ENST00000504841 AGFG2O95081 481 aa6.91□□□□□ -1.3
NPIPB3-203ENST00000504841 FGFR1OPO95684 399 aaKnown RBP6.91□□□□□ -1.3
NPIPB3-203ENST00000504841 MMEP08473 750 aa6.91□□□□□ -1.3
NPIPB3-203ENST00000504841 PLEKP08567 350 aaPredicted RBP6.91□□□□□ -1.3
NPIPB3-203ENST00000504841 KRT7P08729 469 aa6.91□□□□□ -1.3
NPIPB3-203ENST00000504841 CYP11B1P15538 503 aa6.91□□□□□ -1.3
NPIPB3-203ENST00000504841 CD1CP29017 333 aa6.91□□□□□ -1.3
NPIPB3-203ENST00000504841 SDC4P31431 198 aa6.91□□□□□ -1.3
NPIPB3-203ENST00000504841 CDH5P33151 784 aaPredicted RBP6.91□□□□□ -1.3
NPIPB3-203ENST00000504841 CLCN1P35523 988 aa6.91□□□□□ -1.3
NPIPB3-203ENST00000504841 MTIF2P46199 727 aaKnown RBP6.91□□□□□ -1.3
NPIPB3-203ENST00000504841 GABRB2P47870 512 aa6.91□□□□□ -1.3
NPIPB3-203ENST00000504841 UQCRFS1P47985 274 aa6.91□□□□□ -1.3
NPIPB3-203ENST00000504841 SUOXP51687 545 aa6.91□□□□□ -1.3
NPIPB3-203ENST00000504841 BPIFB4P59827 614 aa6.91□□□□□ -1.3
NPIPB3-203ENST00000504841 RALGDSQ12967 914 aa6.91□□□□□ -1.3
NPIPB3-203ENST00000504841 SERINC3Q13530 473 aa6.91□□□□□ -1.3
NPIPB3-203ENST00000504841 SEPT6Q14141 434 aa6.91□□□□□ -1.3
NPIPB3-203ENST00000504841 ACOX1Q15067 660 aa6.91□□□□□ -1.3
NPIPB3-203ENST00000504841 DCAF12Q5T6F0 453 aa6.91□□□□□ -1.3
NPIPB3-203ENST00000504841 DENND2CQ68D51 928 aa6.91□□□□□ -1.3
NPIPB3-203ENST00000504841 BRAT1Q6PJG6 821 aa6.91□□□□□ -1.3
NPIPB3-203ENST00000504841 DOK6Q6PKX4 331 aa6.91□□□□□ -1.3
NPIPB3-203ENST00000504841 BNIPLQ7Z465 357 aa6.91□□□□□ -1.3
NPIPB3-203ENST00000504841 KDELC2Q7Z4H8 507 aa6.91□□□□□ -1.3
NPIPB3-203ENST00000504841 DNAAF5Q86Y56 855 aa6.91□□□□□ -1.3
NPIPB3-203ENST00000504841 CAMK1DQ8IU85 385 aa6.91□□□□□ -1.3
NPIPB3-203ENST00000504841 FAM71AQ8IYT1 594 aa6.91□□□□□ -1.3
NPIPB3-203ENST00000504841 NLGN4XQ8N0W4 816 aa6.91□□□□□ -1.3
NPIPB3-203ENST00000504841 PYROXD2Q8N2H3 581 aa6.91□□□□□ -1.3
NPIPB3-203ENST00000504841 PELI3Q8N2H9 469 aa6.91□□□□□ -1.3
NPIPB3-203ENST00000504841 RTL3Q8N8U3 475 aaKnown RBP6.91□□□□□ -1.3
NPIPB3-203ENST00000504841 NLGN4YQ8NFZ3 816 aaPredicted RBP6.91□□□□□ -1.3
NPIPB3-203ENST00000504841 JOSD2Q8TAC2 188 aa6.91□□□□□ -1.3
NPIPB3-203ENST00000504841 APOBEC4Q8WW27 367 aaKnown RBP6.91□□□□□ -1.3
NPIPB3-203ENST00000504841 RXFP2Q8WXD0 754 aa6.91□□□□□ -1.3
NPIPB3-203ENST00000504841 CASKIN2Q8WXE0 1202 aa6.91□□□□□ -1.3
NPIPB3-203ENST00000504841 STARD8Q92502 1023 aa6.91□□□□□ -1.3
NPIPB3-203ENST00000504841 SLC45A3Q96JT2 553 aa6.91□□□□□ -1.3
NPIPB3-203ENST00000504841 C11orf70Q9BRQ4 267 aa6.91□□□□□ -1.3
NPIPB3-203ENST00000504841 DDA1Q9BW61 102 aa6.91□□□□□ -1.3
NPIPB3-203ENST00000504841 GSDMCQ9BYG8 508 aa6.91□□□□□ -1.3
NPIPB3-203ENST00000504841 B3GNT4Q9C0J1 378 aa6.91□□□□□ -1.3
NPIPB3-203ENST00000504841 CDH19Q9H159 772 aa6.91□□□□□ -1.3
NPIPB3-203ENST00000504841 SUV39H2Q9H5I1 410 aa6.91□□□□□ -1.3
NPIPB3-203ENST00000504841 NOL6Q9H6R4 1146 aaKnown RBP6.91□□□□□ -1.3
NPIPB3-203ENST00000504841 SIX2Q9NPC8 291 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms