RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 SARDHQ9UL12 918 aa10.43□□□□□ -0.74
TPM3-217ENST00000504663 F5P12259 2224 aa10.43□□□□□ -0.74
TPM3-217ENST00000504663 EDDM13A0A1B0GTR0 161 aa10.42□□□□□ -0.74
TPM3-217ENST00000504663 TLDC2A0PJX2 215 aa10.42□□□□□ -0.74
TPM3-217ENST00000504663 OR51F1A6NGY5 319 aa10.42□□□□□ -0.74
TPM3-217ENST00000504663 HMGB1P1B2RPK0 211 aaPredicted RBP10.42□□□□□ -0.74
TPM3-217ENST00000504663 GOLGA8TH3BQL2 631 aa10.42□□□□□ -0.74
TPM3-217ENST00000504663 TIMM44O43615 452 aa10.42□□□□□ -0.74
TPM3-217ENST00000504663 LEFTY1O75610 366 aa10.42□□□□□ -0.74
TPM3-217ENST00000504663 C1SP09871 688 aa10.42□□□□□ -0.74
TPM3-217ENST00000504663 CTPS1P17812 591 aa10.42□□□□□ -0.74
TPM3-217ENST00000504663 GM2AP17900 193 aa10.42□□□□□ -0.74
TPM3-217ENST00000504663 SERPINA4P29622 427 aa10.42□□□□□ -0.74
TPM3-217ENST00000504663 MAGEA12P43365 314 aa10.42□□□□□ -0.74
TPM3-217ENST00000504663 XIAPP98170 497 aa10.42□□□□□ -0.74
TPM3-217ENST00000504663 TFF2Q03403 129 aa10.42□□□□□ -0.74
TPM3-217ENST00000504663 RALGDSQ12967 914 aa10.42□□□□□ -0.74
TPM3-217ENST00000504663 PEX6Q13608 980 aa10.42□□□□□ -0.74
TPM3-217ENST00000504663 SEPT6Q14141 434 aa10.42□□□□□ -0.74
TPM3-217ENST00000504663 TMED2Q15363 201 aa10.42□□□□□ -0.74
TPM3-217ENST00000504663 ACCSLQ4AC99 568 aa10.42□□□□□ -0.74
TPM3-217ENST00000504663 HSP90AA5PQ58FG0 334 aa10.42□□□□□ -0.74
TPM3-217ENST00000504663 TMEM196Q5HYL7 178 aa10.42□□□□□ -0.74
TPM3-217ENST00000504663 PDPK2PQ6A1A2 396 aa10.42□□□□□ -0.74
TPM3-217ENST00000504663 GDPD4Q6W3E5 623 aa10.42□□□□□ -0.74
TPM3-217ENST00000504663 PARS2Q7L3T8 475 aaKnown RBP10.42□□□□□ -0.74
TPM3-217ENST00000504663 LYSMD3Q7Z3D4 306 aa10.42□□□□□ -0.74
TPM3-217ENST00000504663 TSPAN33Q86UF1 283 aa10.42□□□□□ -0.74
TPM3-217ENST00000504663 SLC26A11Q86WA9 606 aa10.42□□□□□ -0.74
TPM3-217ENST00000504663 RASSF3Q86WH2 238 aa10.42□□□□□ -0.74
TPM3-217ENST00000504663 LRRC6Q86X45 466 aa10.42□□□□□ -0.74
TPM3-217ENST00000504663 DENND6AQ8IWF6 608 aa10.42□□□□□ -0.74
TPM3-217ENST00000504663 KRT222Q8N1A0 295 aa10.42□□□□□ -0.74
TPM3-217ENST00000504663 ZNF687Q8N1G0 1237 aa10.42□□□□□ -0.74
TPM3-217ENST00000504663 PPM1NQ8N819 430 aa10.42□□□□□ -0.74
TPM3-217ENST00000504663 ACVR1CQ8NER5 493 aa10.42□□□□□ -0.74
TPM3-217ENST00000504663 GRIN3AQ8TCU5 1115 aa10.42□□□□□ -0.74
TPM3-217ENST00000504663 PPM1EQ8WY54 764 aa10.42□□□□□ -0.74
TPM3-217ENST00000504663 MRRFQ96E11 262 aaKnown RBP10.42□□□□□ -0.74
TPM3-217ENST00000504663 TBATAQ96M53 351 aa10.42□□□□□ -0.74
TPM3-217ENST00000504663 ZNF641Q96N77 438 aaPredicted RBP10.42□□□□□ -0.74
TPM3-217ENST00000504663 KLHL32Q96NJ5 620 aa10.42□□□□□ -0.74
TPM3-217ENST00000504663 PHOX2BQ99453 314 aa10.42□□□□□ -0.74
TPM3-217ENST00000504663 P2RY13Q9BPV8 354 aa10.42□□□□□ -0.74
TPM3-217ENST00000504663 MFSD1Q9H3U5 465 aa10.42□□□□□ -0.74
TPM3-217ENST00000504663 MAGEE1Q9HCI5 957 aa10.42□□□□□ -0.74
TPM3-217ENST00000504663 HEBP1Q9NRV9 189 aa10.42□□□□□ -0.74
TPM3-217ENST00000504663 IL17CQ9P0M4 197 aa10.42□□□□□ -0.74
TPM3-217ENST00000504663 NOVA2Q9UNW9 492 aaKnown RBP10.42□□□□□ -0.74
TPM3-217ENST00000504663 A0A1W2PPM1 405 aa10.41□□□□□ -0.74
TPM3-217ENST00000504663 CCDC162PA2VCL2 907 aa10.41□□□□□ -0.74
TPM3-217ENST00000504663 TBC1D3BA6NDS4 549 aa10.41□□□□□ -0.74
TPM3-217ENST00000504663 POM121CA8CG34 1229 aa10.41□□□□□ -0.74
TPM3-217ENST00000504663 H7C0S8 307 aa10.41□□□□□ -0.74
TPM3-217ENST00000504663 ADAM23O75077 832 aa10.41□□□□□ -0.74
TPM3-217ENST00000504663 RFPL1O75677 317 aa10.41□□□□□ -0.74
TPM3-217ENST00000504663 RPP40O75818 363 aaKnown RBP10.41□□□□□ -0.74
TPM3-217ENST00000504663 VAPBO95292 243 aa10.41□□□□□ -0.74
TPM3-217ENST00000504663 EGFP01133 1207 aa10.41□□□□□ -0.74
TPM3-217ENST00000504663 APODP05090 189 aa10.41□□□□□ -0.74
TPM3-217ENST00000504663 PRSS56P0CW18 603 aa10.41□□□□□ -0.74
TPM3-217ENST00000504663 TIMP2P16035 220 aa10.41□□□□□ -0.74
TPM3-217ENST00000504663 FOXN2P32314 431 aa10.41□□□□□ -0.74
TPM3-217ENST00000504663 HNF1BP35680 557 aa10.41□□□□□ -0.74
TPM3-217ENST00000504663 CCNFP41002 786 aa10.41□□□□□ -0.74
TPM3-217ENST00000504663 ABL2P42684 1182 aa10.41□□□□□ -0.74
TPM3-217ENST00000504663 SLC1A2P43004 574 aa10.41□□□□□ -0.74
TPM3-217ENST00000504663 MSH2P43246 934 aa10.41□□□□□ -0.74
TPM3-217ENST00000504663 ABCG1P45844 678 aa10.41□□□□□ -0.74
TPM3-217ENST00000504663 GYS2P54840 703 aa10.41□□□□□ -0.74
TPM3-217ENST00000504663 MAGOHP61326 146 aaKnown RBP10.41□□□□□ -0.74
TPM3-217ENST00000504663 MPP1Q00013 466 aa10.41□□□□□ -0.74
TPM3-217ENST00000504663 BMPR2Q13873 1038 aa10.41□□□□□ -0.74
TPM3-217ENST00000504663 MPP2Q14168 576 aa10.41□□□□□ -0.74
TPM3-217ENST00000504663 FNDC3BQ53EP0 1204 aaKnown RBP10.41□□□□□ -0.74
TPM3-217ENST00000504663 ZNF789Q5FWF6 425 aa10.41□□□□□ -0.74
TPM3-217ENST00000504663 ARSIQ5FYB1 569 aa10.41□□□□□ -0.74
TPM3-217ENST00000504663 LRRC73Q5JTD7 316 aa10.41□□□□□ -0.74
TPM3-217ENST00000504663 PTCRAQ6ISU1 281 aaPredicted RBP10.41□□□□□ -0.74
TPM3-217ENST00000504663 CRTC1Q6UUV9 634 aa10.41□□□□□ -0.74
TPM3-217ENST00000504663 NLRP9Q7RTR0 991 aa10.41□□□□□ -0.74
TPM3-217ENST00000504663 GLT6D1Q7Z4J2 308 aa10.41□□□□□ -0.74
TPM3-217ENST00000504663 CROCCP2Q86T23 111 aa10.41□□□□□ -0.74
TPM3-217ENST00000504663 SUGP1Q8IWZ8 645 aaKnown RBP10.41□□□□□ -0.74
TPM3-217ENST00000504663 STK40Q8N2I9 435 aa10.41□□□□□ -0.74
TPM3-217ENST00000504663 CBARPQ8N350 705 aaPredicted RBP10.41□□□□□ -0.74
TPM3-217ENST00000504663 RYBPQ8N488 228 aaPredicted RBP10.41□□□□□ -0.74
TPM3-217ENST00000504663 C2CD4AQ8NCU7 369 aaPredicted RBP10.41□□□□□ -0.74
TPM3-217ENST00000504663 STYXQ8WUJ0 223 aa10.41□□□□□ -0.74
TPM3-217ENST00000504663 PDCD6IPQ8WUM4 868 aaKnown RBP10.41□□□□□ -0.74
TPM3-217ENST00000504663 RMDN1Q96DB5 314 aa10.41□□□□□ -0.74
TPM3-217ENST00000504663 SERAC1Q96JX3 654 aa10.41□□□□□ -0.74
TPM3-217ENST00000504663 RBBP8Q99708 897 aa10.41□□□□□ -0.74
TPM3-217ENST00000504663 GABRG3Q99928 467 aa10.41□□□□□ -0.74
TPM3-217ENST00000504663 ADGRE3Q9BY15 652 aa10.41□□□□□ -0.74
TPM3-217ENST00000504663 SUDS3Q9H7L9 328 aaPredicted RBP10.41□□□□□ -0.74
TPM3-217ENST00000504663 PRSS16Q9NQE7 514 aa10.41□□□□□ -0.74
TPM3-217ENST00000504663 SLC2A4RGQ9NR83 387 aa10.41□□□□□ -0.74
TPM3-217ENST00000504663 IARS2Q9NSE4 1012 aaKnown RBP10.41□□□□□ -0.74
TPM3-217ENST00000504663 C20orf96Q9NUD7 363 aaPredicted RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms