RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 CDKN3Q16667 212 aa14.29□□□□□ -0.12
HOXC9-202ENST00000504557 MFSD7Q6UXD7 560 aa14.29□□□□□ -0.12
HOXC9-202ENST00000504557 CCNI2Q6ZMN8 369 aaPredicted RBP14.29□□□□□ -0.12
HOXC9-202ENST00000504557 TMPRSS7Q7RTY8 843 aa14.29□□□□□ -0.12
HOXC9-202ENST00000504557 KDELC2Q7Z4H8 507 aa14.29□□□□□ -0.12
HOXC9-202ENST00000504557 HSD11B1LQ7Z5J1 315 aa14.29□□□□□ -0.12
HOXC9-202ENST00000504557 DAAM2Q86T65 1068 aa14.29□□□□□ -0.12
HOXC9-202ENST00000504557 CCDC170Q8IYT3 715 aa14.29□□□□□ -0.12
HOXC9-202ENST00000504557 PELI3Q8N2H9 469 aa14.29□□□□□ -0.12
HOXC9-202ENST00000504557 GALNT15Q8N3T1 639 aa14.29□□□□□ -0.12
HOXC9-202ENST00000504557 TEX26Q8N6G2 289 aa14.29□□□□□ -0.12
HOXC9-202ENST00000504557 LPCAT1Q8NF37 534 aa14.29□□□□□ -0.12
HOXC9-202ENST00000504557 MAML1Q92585 1016 aa14.29□□□□□ -0.12
HOXC9-202ENST00000504557 HAUS1Q96CS2 278 aa14.29□□□□□ -0.12
HOXC9-202ENST00000504557 HDAC11Q96DB2 347 aa14.29□□□□□ -0.12
HOXC9-202ENST00000504557 NUS1Q96E22 293 aa14.29□□□□□ -0.12
HOXC9-202ENST00000504557 PANX2Q96RD6 677 aa14.29□□□□□ -0.12
HOXC9-202ENST00000504557 TMEM121BQ9BXQ6 578 aaPredicted RBP14.29□□□□□ -0.12
HOXC9-202ENST00000504557 LUC7LQ9NQ29 371 aaKnown RBP14.29□□□□□ -0.12
HOXC9-202ENST00000504557 HAUS2Q9NVX0 235 aa14.29□□□□□ -0.12
HOXC9-202ENST00000504557 NLGN3Q9NZ94 848 aa14.29□□□□□ -0.12
HOXC9-202ENST00000504557 SIRPGQ9P1W8 387 aa14.29□□□□□ -0.12
HOXC9-202ENST00000504557 SAE1Q9UBE0 346 aaPredicted RBP14.29□□□□□ -0.12
HOXC9-202ENST00000504557 SPASTQ9UBP0 616 aa14.29□□□□□ -0.12
HOXC9-202ENST00000504557 KLQ9UEF7 1012 aa14.29□□□□□ -0.12
HOXC9-202ENST00000504557 CD84Q9UIB8 345 aa14.29□□□□□ -0.12
HOXC9-202ENST00000504557 ZMIZ1Q9ULJ6 1067 aa14.29□□□□□ -0.12
HOXC9-202ENST00000504557 PHTF1Q9UMS5 762 aa14.29□□□□□ -0.12
HOXC9-202ENST00000504557 ALG6Q9Y672 507 aa14.29□□□□□ -0.12
HOXC9-202ENST00000504557 EPN1Q9Y6I3 576 aaPredicted RBP14.29□□□□□ -0.12
HOXC9-202ENST00000504557 ZFC3H1O60293 1989 aaKnown RBP14.29□□□□□ -0.12
HOXC9-202ENST00000504557 CPED1A4D0V7 1026 aa14.28□□□□□ -0.12
HOXC9-202ENST00000504557 CACNB4O00305 520 aaPredicted RBP14.28□□□□□ -0.12
HOXC9-202ENST00000504557 GCATO75600 419 aa14.28□□□□□ -0.12
HOXC9-202ENST00000504557 DKK1O94907 266 aa14.28□□□□□ -0.12
HOXC9-202ENST00000504557 NDUFA10O95299 355 aa14.28□□□□□ -0.12
HOXC9-202ENST00000504557 ANXA6P08133 673 aa14.28□□□□□ -0.12
HOXC9-202ENST00000504557 GIMD1P0DJR0 217 aa14.28□□□□□ -0.12
HOXC9-202ENST00000504557 GM2AP17900 193 aa14.28□□□□□ -0.12
HOXC9-202ENST00000504557 LHCGRP22888 699 aa14.28□□□□□ -0.12
HOXC9-202ENST00000504557 NFKBIAP25963 317 aa14.28□□□□□ -0.12
HOXC9-202ENST00000504557 ETV3P41162 512 aa14.28□□□□□ -0.12
HOXC9-202ENST00000504557 CD86P42081 329 aa14.28□□□□□ -0.12
HOXC9-202ENST00000504557 MARCKSL1P49006 195 aa14.28□□□□□ -0.12
HOXC9-202ENST00000504557 NIPAL4Q0D2K0 466 aa14.28□□□□□ -0.12
HOXC9-202ENST00000504557 ZBTB17Q13105 803 aa14.28□□□□□ -0.12
HOXC9-202ENST00000504557 MTM1Q13496 603 aa14.28□□□□□ -0.12
HOXC9-202ENST00000504557 ALG11Q2TAA5 492 aa14.28□□□□□ -0.12
HOXC9-202ENST00000504557 HES3Q5TGS1 186 aa14.28□□□□□ -0.12
HOXC9-202ENST00000504557 KCTD16Q68DU8 428 aa14.28□□□□□ -0.12
HOXC9-202ENST00000504557 CRTC1Q6UUV9 634 aa14.28□□□□□ -0.12
HOXC9-202ENST00000504557 RAD9BQ6WBX8 426 aa14.28□□□□□ -0.12
HOXC9-202ENST00000504557 USP45Q70EL2 814 aa14.28□□□□□ -0.12
HOXC9-202ENST00000504557 ACRBPQ8NEB7 543 aa14.28□□□□□ -0.12
HOXC9-202ENST00000504557 TPCN2Q8NHX9 752 aa14.28□□□□□ -0.12
HOXC9-202ENST00000504557 MDM1Q8TC05 714 aa14.28□□□□□ -0.12
HOXC9-202ENST00000504557 BTN2A2Q8WVV5 523 aa14.28□□□□□ -0.12
HOXC9-202ENST00000504557 AGAP3Q96P47 875 aa14.28□□□□□ -0.12
HOXC9-202ENST00000504557 TSGA13Q96PP4 275 aa14.28□□□□□ -0.12
HOXC9-202ENST00000504557 LRRC61Q9BV99 259 aa14.28□□□□□ -0.12
HOXC9-202ENST00000504557 SYNDIG1Q9H7V2 258 aa14.28□□□□□ -0.12
HOXC9-202ENST00000504557 EPG5Q9HCE0 2579 aa14.28□□□□□ -0.12
HOXC9-202ENST00000504557 MRPL40Q9NQ50 206 aaKnown RBP14.28□□□□□ -0.12
HOXC9-202ENST00000504557 A0A1W2PQ67 120 aa14.27□□□□□ -0.13
HOXC9-202ENST00000504557 RCCD1A6NED2 376 aa14.27□□□□□ -0.13
HOXC9-202ENST00000504557 F5H423 210 aaPredicted RBP14.27□□□□□ -0.13
HOXC9-202ENST00000504557 CST8O60676 142 aa14.27□□□□□ -0.13
HOXC9-202ENST00000504557 KRT37O76014 449 aa14.27□□□□□ -0.13
HOXC9-202ENST00000504557 HEXIM1O94992 359 aaKnown RBP14.27□□□□□ -0.13
HOXC9-202ENST00000504557 RASGRP1O95267 797 aa14.27□□□□□ -0.13
HOXC9-202ENST00000504557 LCA5LO95447 670 aa14.27□□□□□ -0.13
HOXC9-202ENST00000504557 SLC4A1P02730 911 aa14.27□□□□□ -0.13
HOXC9-202ENST00000504557 TSHRP16473 764 aa14.27□□□□□ -0.13
HOXC9-202ENST00000504557 HNF1BP35680 557 aa14.27□□□□□ -0.13
HOXC9-202ENST00000504557 SRP54P61011 504 aaKnown RBP14.27□□□□□ -0.13
HOXC9-202ENST00000504557 PPIDQ08752 370 aaKnown RBP14.27□□□□□ -0.13
HOXC9-202ENST00000504557 IHHQ14623 411 aa14.27□□□□□ -0.13
HOXC9-202ENST00000504557 PDK1Q15118 436 aa14.27□□□□□ -0.13
HOXC9-202ENST00000504557 PCSK7Q16549 785 aa14.27□□□□□ -0.13
HOXC9-202ENST00000504557 RALGPS1Q5JS13 557 aa14.27□□□□□ -0.13
HOXC9-202ENST00000504557 LRRC38Q5VT99 294 aa14.27□□□□□ -0.13
HOXC9-202ENST00000504557 SLC9A4Q6AI14 798 aa14.27□□□□□ -0.13
HOXC9-202ENST00000504557 RAET1GQ6H3X3 334 aa14.27□□□□□ -0.13
HOXC9-202ENST00000504557 SPOCD1Q6ZMY3 1216 aa14.27□□□□□ -0.13
HOXC9-202ENST00000504557 RFLNAQ6ZTI6 216 aa14.27□□□□□ -0.13
HOXC9-202ENST00000504557 Q6ZVL8 140 aa14.27□□□□□ -0.13
HOXC9-202ENST00000504557 KIAA1328Q86T90 577 aa14.27□□□□□ -0.13
HOXC9-202ENST00000504557 TMTC1Q8IUR5 882 aa14.27□□□□□ -0.13
HOXC9-202ENST00000504557 NDUFAF2Q8N183 169 aa14.27□□□□□ -0.13
HOXC9-202ENST00000504557 PIH1D2Q8WWB5 315 aa14.27□□□□□ -0.13
HOXC9-202ENST00000504557 FUBP1Q96AE4 644 aaKnown RBP14.27□□□□□ -0.13
HOXC9-202ENST00000504557 PDXPQ96GD0 296 aa14.27□□□□□ -0.13
HOXC9-202ENST00000504557 COQ10AQ96MF6 247 aa14.27□□□□□ -0.13
HOXC9-202ENST00000504557 WDR92Q96MX6 357 aa14.27□□□□□ -0.13
HOXC9-202ENST00000504557 DUSP23Q9BVJ7 150 aa14.27□□□□□ -0.13
HOXC9-202ENST00000504557 LGR4Q9BXB1 951 aa14.27□□□□□ -0.13
HOXC9-202ENST00000504557 CLPBQ9H078 707 aa14.27□□□□□ -0.13
HOXC9-202ENST00000504557 GULP1Q9UBP9 304 aa14.27□□□□□ -0.13
HOXC9-202ENST00000504557 SALL4Q9UJQ4 1053 aa14.27□□□□□ -0.13
HOXC9-202ENST00000504557 PCDHGA1Q9Y5H4 931 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms