RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 ILF3Q12906 894 aaKnown RBP eCLIP15.87■□□□□ 0.13
PDLIM7-210ENST00000503827 STIM1Q13586 685 aa15.87■□□□□ 0.13
PDLIM7-210ENST00000503827 CFAP58Q5T655 872 aa15.87■□□□□ 0.13
PDLIM7-210ENST00000503827 TMEM71Q6P5X7 295 aa15.87■□□□□ 0.13
PDLIM7-210ENST00000503827 MAMDC2Q7Z304 686 aaPredicted RBP15.87■□□□□ 0.13
PDLIM7-210ENST00000503827 TIPARPQ7Z3E1 657 aaKnown RBP15.87■□□□□ 0.13
PDLIM7-210ENST00000503827 FAM131BQ86XD5 332 aa15.87■□□□□ 0.13
PDLIM7-210ENST00000503827 BMPERQ8N8U9 685 aa15.87■□□□□ 0.13
PDLIM7-210ENST00000503827 PHF12Q96QT6 1004 aa15.87■□□□□ 0.13
PDLIM7-210ENST00000503827 CTRCQ99895 268 aa15.87■□□□□ 0.13
PDLIM7-210ENST00000503827 TAAR2Q9P1P5 351 aa15.87■□□□□ 0.13
PDLIM7-210ENST00000503827 CENPEQ02224 2701 aa15.87■□□□□ 0.13
PDLIM7-210ENST00000503827 ZNF106Q9H2Y7 1883 aaKnown RBP15.86■□□□□ 0.13
PDLIM7-210ENST00000503827 PIGNO95427 931 aa15.86■□□□□ 0.13
PDLIM7-210ENST00000503827 COL8A1P27658 744 aa15.86■□□□□ 0.13
PDLIM7-210ENST00000503827 TNFRSF8P28908 595 aa15.86■□□□□ 0.13
PDLIM7-210ENST00000503827 CSF2RBP32927 897 aa15.86■□□□□ 0.13
PDLIM7-210ENST00000503827 MMP12P39900 470 aa15.86■□□□□ 0.13
PDLIM7-210ENST00000503827 DCTP40126 519 aa15.86■□□□□ 0.13
PDLIM7-210ENST00000503827 PPM1FP49593 454 aaPredicted RBP15.86■□□□□ 0.13
PDLIM7-210ENST00000503827 KRT85P78386 507 aa15.86■□□□□ 0.13
PDLIM7-210ENST00000503827 MC2RQ01718 297 aa15.86■□□□□ 0.13
PDLIM7-210ENST00000503827 PTK2Q05397 1052 aa15.86■□□□□ 0.13
PDLIM7-210ENST00000503827 PEX6Q13608 980 aa15.86■□□□□ 0.13
PDLIM7-210ENST00000503827 PKP1Q13835 747 aa15.86■□□□□ 0.13
PDLIM7-210ENST00000503827 GRM3Q14832 879 aa15.86■□□□□ 0.13
PDLIM7-210ENST00000503827 INO80DQ53TQ3 878 aaPredicted RBP15.86■□□□□ 0.13
PDLIM7-210ENST00000503827 FAM102AQ5T9C2 384 aaPredicted RBP15.86■□□□□ 0.13
PDLIM7-210ENST00000503827 NLRP14Q86W24 1093 aa15.86■□□□□ 0.13
PDLIM7-210ENST00000503827 TICAM1Q8IUC6 712 aa15.86■□□□□ 0.13
PDLIM7-210ENST00000503827 GOLPH3LQ9H4A5 285 aa15.86■□□□□ 0.13
PDLIM7-210ENST00000503827 SUV39H2Q9H5I1 410 aa15.86■□□□□ 0.13
PDLIM7-210ENST00000503827 WDR26Q9H7D7 661 aa15.86■□□□□ 0.13
PDLIM7-210ENST00000503827 SUDS3Q9H7L9 328 aaPredicted RBP15.86■□□□□ 0.13
PDLIM7-210ENST00000503827 CARS2Q9HA77 564 aaKnown RBP15.86■□□□□ 0.13
PDLIM7-210ENST00000503827 TMEM248Q9NWD8 314 aa15.86■□□□□ 0.13
PDLIM7-210ENST00000503827 TMEM9Q9P0T7 183 aa15.86■□□□□ 0.13
PDLIM7-210ENST00000503827 OR12D3Q9UGF7 316 aa15.86■□□□□ 0.13
PDLIM7-210ENST00000503827 ATP8A1Q9Y2Q0 1164 aa15.86■□□□□ 0.13
PDLIM7-210ENST00000503827 TMEM184BQ9Y519 407 aaPredicted RBP15.86■□□□□ 0.13
PDLIM7-210ENST00000503827 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.86■□□□□ 0.13
PDLIM7-210ENST00000503827 TNRC6AQ8NDV7 1962 aaKnown RBP15.86■□□□□ 0.13
PDLIM7-210ENST00000503827 SPENQ96T58 3664 aaKnown RBP15.85■□□□□ 0.13
PDLIM7-210ENST00000503827 DOPEY1Q5JWR5 2465 aa15.85■□□□□ 0.13
PDLIM7-210ENST00000503827 TSPAN11A1L157 253 aa15.85■□□□□ 0.13
PDLIM7-210ENST00000503827 CFAP69A5D8W1 941 aa15.85■□□□□ 0.13
PDLIM7-210ENST00000503827 PPM1DO15297 605 aa15.85■□□□□ 0.13
PDLIM7-210ENST00000503827 INSIG1O15503 277 aa15.85■□□□□ 0.13
PDLIM7-210ENST00000503827 RFPL1O75677 317 aa15.85■□□□□ 0.13
PDLIM7-210ENST00000503827 RECQL5O94762 991 aaPredicted RBP15.85■□□□□ 0.13
PDLIM7-210ENST00000503827 STK17BO94768 372 aa15.85■□□□□ 0.13
PDLIM7-210ENST00000503827 HSP90AA1P07900 732 aaKnown RBP15.85■□□□□ 0.13
PDLIM7-210ENST00000503827 BMP6P22004 513 aa15.85■□□□□ 0.13
PDLIM7-210ENST00000503827 ELAVL4P26378 380 aaKnown RBP15.85■□□□□ 0.13
PDLIM7-210ENST00000503827 TRIM23P36406 574 aa15.85■□□□□ 0.13
PDLIM7-210ENST00000503827 SCNN1AP37088 669 aa15.85■□□□□ 0.13
PDLIM7-210ENST00000503827 GPLD1P80108 840 aa15.85■□□□□ 0.13
PDLIM7-210ENST00000503827 RAPGEF1Q13905 1077 aa15.85■□□□□ 0.13
PDLIM7-210ENST00000503827 GJB7Q6PEY0 223 aa15.85■□□□□ 0.13
PDLIM7-210ENST00000503827 BRAT1Q6PJG6 821 aa15.85■□□□□ 0.13
PDLIM7-210ENST00000503827 NRROSQ86YC3 692 aa15.85■□□□□ 0.13
PDLIM7-210ENST00000503827 TRIM59Q8IWR1 403 aa15.85■□□□□ 0.13
PDLIM7-210ENST00000503827 NETO2Q8NC67 525 aa15.85■□□□□ 0.13
PDLIM7-210ENST00000503827 AHCYL2Q96HN2 611 aaKnown RBP15.85■□□□□ 0.13
PDLIM7-210ENST00000503827 DHTKD1Q96HY7 919 aaPredicted RBP15.85■□□□□ 0.13
PDLIM7-210ENST00000503827 LGR4Q9BXB1 951 aa15.85■□□□□ 0.13
PDLIM7-210ENST00000503827 FBXO8Q9NRD0 319 aa15.85■□□□□ 0.13
PDLIM7-210ENST00000503827 POLHQ9Y253 713 aa15.85■□□□□ 0.13
PDLIM7-210ENST00000503827 MRPS18BQ9Y676 258 aaKnown RBP15.85■□□□□ 0.13
PDLIM7-210ENST00000503827 SHANK1Q9Y566 2161 aa15.85■□□□□ 0.13
PDLIM7-210ENST00000503827 TEX33O43247 280 aa15.84■□□□□ 0.13
PDLIM7-210ENST00000503827 KRT38O76015 456 aa15.84■□□□□ 0.13
PDLIM7-210ENST00000503827 SMC2O95347 1197 aa15.84■□□□□ 0.13
PDLIM7-210ENST00000503827 FLT3P36888 993 aa15.84■□□□□ 0.13
PDLIM7-210ENST00000503827 STAT5AP42229 794 aa15.84■□□□□ 0.13
PDLIM7-210ENST00000503827 NRG1Q02297 640 aaPredicted RBP15.84■□□□□ 0.13
PDLIM7-210ENST00000503827 MANEALQ5VSG8 457 aa15.84■□□□□ 0.13
PDLIM7-210ENST00000503827 SLC30A9Q6PML9 568 aa15.84■□□□□ 0.13
PDLIM7-210ENST00000503827 BNIPLQ7Z465 357 aa15.84■□□□□ 0.13
PDLIM7-210ENST00000503827 DNAAF5Q86Y56 855 aa15.84■□□□□ 0.13
PDLIM7-210ENST00000503827 NAGSQ8N159 534 aa15.84■□□□□ 0.13
PDLIM7-210ENST00000503827 ESX1Q8N693 406 aa15.84■□□□□ 0.13
PDLIM7-210ENST00000503827 PATE1Q8WXA2 126 aa15.84■□□□□ 0.13
PDLIM7-210ENST00000503827 C18orf8Q96DM3 657 aa15.84■□□□□ 0.13
PDLIM7-210ENST00000503827 EXOC2Q96KP1 924 aa15.84■□□□□ 0.13
PDLIM7-210ENST00000503827 CFAP57Q96MR6 1250 aa15.84■□□□□ 0.13
PDLIM7-210ENST00000503827 ZNF641Q96N77 438 aaPredicted RBP15.84■□□□□ 0.13
PDLIM7-210ENST00000503827 CASS4Q9NQ75 786 aa15.84■□□□□ 0.13
PDLIM7-210ENST00000503827 TRNAU1APQ9NX07 287 aaKnown RBP15.84■□□□□ 0.13
PDLIM7-210ENST00000503827 PDP2Q9P2J9 529 aa15.84■□□□□ 0.13
PDLIM7-210ENST00000503827 TLK1Q9UKI8 766 aa15.84■□□□□ 0.13
PDLIM7-210ENST00000503827 A8MU76 341 aa15.83■□□□□ 0.12
PDLIM7-210ENST00000503827 GNA14O95837 355 aa15.83■□□□□ 0.12
PDLIM7-210ENST00000503827 ELFN1P0C7U0 828 aa15.83■□□□□ 0.12
PDLIM7-210ENST00000503827 POU3F2P20265 443 aaPredicted RBP15.83■□□□□ 0.12
PDLIM7-210ENST00000503827 AK4P27144 223 aaPredicted RBP15.83■□□□□ 0.12
PDLIM7-210ENST00000503827 MAP7Q14244 749 aa15.83■□□□□ 0.12
PDLIM7-210ENST00000503827 ERV3-1Q14264 604 aa15.83■□□□□ 0.12
PDLIM7-210ENST00000503827 SNAP47Q5SQN1 464 aa15.83■□□□□ 0.12
PDLIM7-210ENST00000503827 PNCKQ6P2M8 343 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms