RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 CSRP1P21291 193 aaKnown RBP18.28■□□□□ 0.52
PDLIM7-209ENST00000503346 HNF1BP35680 557 aa18.28■□□□□ 0.52
PDLIM7-209ENST00000503346 EPHB1P54762 984 aa18.28■□□□□ 0.52
PDLIM7-209ENST00000503346 LRRC14Q15048 493 aa18.28■□□□□ 0.52
PDLIM7-209ENST00000503346 IRF4Q15306 451 aa18.28■□□□□ 0.52
PDLIM7-209ENST00000503346 SHBQ15464 509 aa18.28■□□□□ 0.52
PDLIM7-209ENST00000503346 SEL1L2Q5TEA6 688 aa18.28■□□□□ 0.52
PDLIM7-209ENST00000503346 DBX2Q6ZNG2 339 aa18.28■□□□□ 0.52
PDLIM7-209ENST00000503346 PTAR1Q7Z6K3 402 aaPredicted RBP18.28■□□□□ 0.52
PDLIM7-209ENST00000503346 LPCAT1Q8NF37 534 aa18.28■□□□□ 0.52
PDLIM7-209ENST00000503346 COQ10AQ96MF6 247 aa18.28■□□□□ 0.52
PDLIM7-209ENST00000503346 TRIB3Q96RU7 358 aa18.28■□□□□ 0.52
PDLIM7-209ENST00000503346 LYSMD1Q96S90 227 aa18.28■□□□□ 0.52
PDLIM7-209ENST00000503346 FERMT1Q9BQL6 677 aa18.28■□□□□ 0.52
PDLIM7-209ENST00000503346 C10orf88Q9H8K7 445 aa18.28■□□□□ 0.52
PDLIM7-209ENST00000503346 DNPEPQ9ULA0 475 aa18.28■□□□□ 0.52
PDLIM7-209ENST00000503346 DCHS1Q96JQ0 3298 aa18.27■□□□□ 0.52
PDLIM7-209ENST00000503346 CAPN8A6NHC0 703 aa18.27■□□□□ 0.52
PDLIM7-209ENST00000503346 ALPIP09923 528 aa18.27■□□□□ 0.52
PDLIM7-209ENST00000503346 NFKB1P19838 968 aa18.27■□□□□ 0.52
PDLIM7-209ENST00000503346 ARRB1P49407 418 aaPredicted RBP18.27■□□□□ 0.52
PDLIM7-209ENST00000503346 YPEL5P62699 121 aa18.27■□□□□ 0.52
PDLIM7-209ENST00000503346 PTPRRQ15256 657 aa18.27■□□□□ 0.52
PDLIM7-209ENST00000503346 QPCTQ16769 361 aa18.27■□□□□ 0.52
PDLIM7-209ENST00000503346 PRAMEF14Q5SWL7 426 aa18.27■□□□□ 0.52
PDLIM7-209ENST00000503346 DARS2Q6PI48 645 aaKnown RBP18.27■□□□□ 0.52
PDLIM7-209ENST00000503346 PID1Q7Z2X4 250 aa18.27■□□□□ 0.52
PDLIM7-209ENST00000503346 DGLUCYQ7Z3D6 616 aa18.27■□□□□ 0.52
PDLIM7-209ENST00000503346 TSPAN33Q86UF1 283 aa18.27■□□□□ 0.52
PDLIM7-209ENST00000503346 REXO1L1PQ8IX06 675 aa18.27■□□□□ 0.52
PDLIM7-209ENST00000503346 SPATA22Q8NHS9 363 aa18.27■□□□□ 0.52
PDLIM7-209ENST00000503346 IFT43Q96FT9 208 aa18.27■□□□□ 0.52
PDLIM7-209ENST00000503346 FCRL5Q96RD9 977 aa18.27■□□□□ 0.52
PDLIM7-209ENST00000503346 FAM118BQ9BPY3 351 aa18.27■□□□□ 0.52
PDLIM7-209ENST00000503346 TLR10Q9BXR5 811 aa18.27■□□□□ 0.52
PDLIM7-209ENST00000503346 ADGRE3Q9BY15 652 aa18.27■□□□□ 0.52
PDLIM7-209ENST00000503346 KCTD5Q9NXV2 234 aa18.27■□□□□ 0.52
PDLIM7-209ENST00000503346 TRPM6Q9BX84 2022 aa18.27■□□□□ 0.51
PDLIM7-209ENST00000503346 TCRBV7S2A1N4TA0A589 114 aa18.26■□□□□ 0.51
PDLIM7-209ENST00000503346 ANKRD66B4E2M5 251 aa18.26■□□□□ 0.51
PDLIM7-209ENST00000503346 ZSCAN12O43309 604 aa18.26■□□□□ 0.51
PDLIM7-209ENST00000503346 MT-CYBP00156 380 aaPredicted RBP18.26■□□□□ 0.51
PDLIM7-209ENST00000503346 ZNF30P17039 623 aa18.26■□□□□ 0.51
PDLIM7-209ENST00000503346 ARHGEF7Q14155 803 aa18.26■□□□□ 0.51
PDLIM7-209ENST00000503346 SUZ12Q15022 739 aaKnown RBP18.26■□□□□ 0.51
PDLIM7-209ENST00000503346 CRTC1Q6UUV9 634 aa18.26■□□□□ 0.51
PDLIM7-209ENST00000503346 SLC13A5Q86YT5 568 aaPredicted RBP18.26■□□□□ 0.51
PDLIM7-209ENST00000503346 SLC35B2Q8TB61 432 aa18.26■□□□□ 0.51
PDLIM7-209ENST00000503346 SMIM14Q96QK8 99 aa18.26■□□□□ 0.51
PDLIM7-209ENST00000503346 USP29Q9HBJ7 922 aa18.26■□□□□ 0.51
PDLIM7-209ENST00000503346 FAM153AQ9UHL3 310 aa18.26■□□□□ 0.51
PDLIM7-209ENST00000503346 R3HDM2Q9Y2K5 976 aaKnown RBP18.26■□□□□ 0.51
PDLIM7-209ENST00000503346 DNAH14Q0VDD8 3507 aa18.26■□□□□ 0.51
PDLIM7-209ENST00000503346 ADAMTS9Q9P2N4 1935 aa18.25■□□□□ 0.51
PDLIM7-209ENST00000503346 SPTY2D1-AS1A0A0U1RR47 76 aa18.25■□□□□ 0.51
PDLIM7-209ENST00000503346 KCNN4O15554 427 aa18.25■□□□□ 0.51
PDLIM7-209ENST00000503346 FLRT2O43155 660 aa18.25■□□□□ 0.51
PDLIM7-209ENST00000503346 SH3BP5O60239 455 aa18.25■□□□□ 0.51
PDLIM7-209ENST00000503346 EPHA8P29322 1005 aaPredicted RBP18.25■□□□□ 0.51
PDLIM7-209ENST00000503346 IL9RQ01113 521 aa18.25■□□□□ 0.51
PDLIM7-209ENST00000503346 CDK18Q07002 472 aa18.25■□□□□ 0.51
PDLIM7-209ENST00000503346 MTM1Q13496 603 aa18.25■□□□□ 0.51
PDLIM7-209ENST00000503346 PDE1CQ14123 709 aaPredicted RBP18.25■□□□□ 0.51
PDLIM7-209ENST00000503346 FZD2Q14332 565 aa18.25■□□□□ 0.51
PDLIM7-209ENST00000503346 ACOX1Q15067 660 aa18.25■□□□□ 0.51
PDLIM7-209ENST00000503346 LRRC66Q68CR7 880 aa18.25■□□□□ 0.51
PDLIM7-209ENST00000503346 KDELC1Q6UW63 502 aa18.25■□□□□ 0.51
PDLIM7-209ENST00000503346 KDM7AQ6ZMT4 941 aa18.25■□□□□ 0.51
PDLIM7-209ENST00000503346 HSD11B1LQ7Z5J1 315 aa18.25■□□□□ 0.51
PDLIM7-209ENST00000503346 NAXDQ8IW45 347 aa18.25■□□□□ 0.51
PDLIM7-209ENST00000503346 RAVER1Q8IY67 606 aaKnown RBP18.25■□□□□ 0.51
PDLIM7-209ENST00000503346 SAP25Q8TEE9 199 aa18.25■□□□□ 0.51
PDLIM7-209ENST00000503346 DTD2Q96FN9 168 aa18.25■□□□□ 0.51
PDLIM7-209ENST00000503346 MLPHQ9BV36 600 aaPredicted RBP18.25■□□□□ 0.51
PDLIM7-209ENST00000503346 FRMD8P1Q9BZ68 369 aaPredicted RBP18.25■□□□□ 0.51
PDLIM7-209ENST00000503346 GBA3Q9H227 469 aa18.25■□□□□ 0.51
PDLIM7-209ENST00000503346 SLC32A1Q9H598 525 aa18.25■□□□□ 0.51
PDLIM7-209ENST00000503346 RSPH14Q9UHP6 348 aa18.25■□□□□ 0.51
PDLIM7-209ENST00000503346 ANKRD36A6QL64 1941 aa18.24■□□□□ 0.51
PDLIM7-209ENST00000503346 PMPCBO75439 489 aa18.24■□□□□ 0.51
PDLIM7-209ENST00000503346 STK10O94804 968 aaKnown RBP18.24■□□□□ 0.51
PDLIM7-209ENST00000503346 KCNK5O95279 499 aa18.24■□□□□ 0.51
PDLIM7-209ENST00000503346 EPOP01588 193 aa18.24■□□□□ 0.51
PDLIM7-209ENST00000503346 PCCBP05166 539 aa18.24■□□□□ 0.51
PDLIM7-209ENST00000503346 CEACAM1P13688 526 aa18.24■□□□□ 0.51
PDLIM7-209ENST00000503346 STC1P52823 247 aa18.24■□□□□ 0.51
PDLIM7-209ENST00000503346 PTK2BQ14289 1009 aa18.24■□□□□ 0.51
PDLIM7-209ENST00000503346 GALNT3Q14435 633 aa18.24■□□□□ 0.51
PDLIM7-209ENST00000503346 INPP5AQ14642 412 aa18.24■□□□□ 0.51
PDLIM7-209ENST00000503346 PCSK7Q16549 785 aa18.24■□□□□ 0.51
PDLIM7-209ENST00000503346 CDKN3Q16667 212 aa18.24■□□□□ 0.51
PDLIM7-209ENST00000503346 ANKRD20A2Q5SQ80 823 aa18.24■□□□□ 0.51
PDLIM7-209ENST00000503346 TPRG1LQ5T0D9 272 aa18.24■□□□□ 0.51
PDLIM7-209ENST00000503346 ANKRD20A1Q5TYW2 823 aa18.24■□□□□ 0.51
PDLIM7-209ENST00000503346 ANKRD20A3Q5VUR7 823 aa18.24■□□□□ 0.51
PDLIM7-209ENST00000503346 ITPRIPL1Q6GPH6 555 aa18.24■□□□□ 0.51
PDLIM7-209ENST00000503346 ESRP1Q6NXG1 681 aaKnown RBP18.24■□□□□ 0.51
PDLIM7-209ENST00000503346 TECPR1Q7Z6L1 1165 aa18.24■□□□□ 0.51
PDLIM7-209ENST00000503346 PARGQ86W56 976 aa18.24■□□□□ 0.51
PDLIM7-209ENST00000503346 DEFB124Q8NES8 71 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms