RNA–Protein interactions for RNA: ENST00000502422.5

MATR3-202, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 2,250 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-202ENST00000502422 KNTC1P50748 2209 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 TENM4Q6N022 2769 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 A0A0B4J269 797 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 A0A1W2PQF6 199 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 E2F8A0AVK6 867 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 PP2D1A8MPX8 630 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 ANKRD63C9JTQ0 380 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 EDF1O60869 148 aaKnown RBP4.56□□□□□ -1.68
MATR3-202ENST00000502422 DCTN3O75935 186 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 WISP1O95388 367 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 FGGP02679 453 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 ITGB3P05106 788 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 BRAFP15056 766 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 CPA3P15088 417 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 ANPEPP15144 967 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 STX2P32856 288 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 RXRGP48443 463 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 ARSDP51689 593 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 NCKAP1LP55160 1127 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 TFAMQ00059 246 aaKnown RBP4.56□□□□□ -1.68
MATR3-202ENST00000502422 PDE1BQ01064 536 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 INAVAQ3KP66 663 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 SLC45A4Q5BKX6 768 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 TDRD10Q5VZ19 366 aaKnown RBP4.56□□□□□ -1.68
MATR3-202ENST00000502422 DPY19L2P1Q6NXN4 242 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 UGT2A3Q6UWM9 527 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 DTHD1Q6ZMT9 781 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 DBX2Q6ZNG2 339 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 RGS9BPQ6ZS82 235 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 CLNKQ7Z7G1 428 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 PHLDB2Q86SQ0 1253 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 SYT2Q8N9I0 419 aaPredicted RBP4.56□□□□□ -1.68
MATR3-202ENST00000502422 ZSCAN1Q8NBB4 408 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 CADM4Q8NFZ8 388 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 DNASE2BQ8WZ79 361 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 HPS3Q969F9 1004 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 SPATA17Q96L03 361 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 MRGPRX1Q96LB2 322 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 DMRTB1Q96MA1 342 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 SERPINB12Q96P63 405 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 PPCSQ9HAB8 311 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 ARNT2Q9HBZ2 717 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 KCNK9Q9NPC2 374 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 CD93Q9NPY3 652 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 ARL8BQ9NVJ2 186 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 DNAJC17Q9NVM6 304 aaKnown RBP4.56□□□□□ -1.68
MATR3-202ENST00000502422 TUBA8Q9NY65 449 aaPredicted RBP4.56□□□□□ -1.68
MATR3-202ENST00000502422 EURLQ9NYK6 297 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 WSB2Q9NYS7 404 aaPredicted RBP4.56□□□□□ -1.68
MATR3-202ENST00000502422 ZNHIT2Q9UHR6 403 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 EIF2B4Q9UI10 523 aaKnown RBP4.56□□□□□ -1.68
MATR3-202ENST00000502422 AGO2Q9UKV8 859 aaKnown RBP4.56□□□□□ -1.68
MATR3-202ENST00000502422 GRID1Q9ULK0 1009 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 PHTF1Q9UMS5 762 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 FNDC3AQ9Y2H6 1198 aaKnown RBP4.56□□□□□ -1.68
MATR3-202ENST00000502422 FADS3Q9Y5Q0 445 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 RAD54BQ9Y620 910 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 ATMQ13315 3056 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 SH3PXD2BA1X283 911 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 ZNF840PA6NDX5 716 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 FBP2O00757 339 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 FAM189A1O60320 539 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 HNRNPCL1O60812 293 aaKnown RBP4.56□□□□□ -1.68
MATR3-202ENST00000502422 CCDC22O60826 627 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 PDE5AO76074 875 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 USP1O94782 785 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 IL18RAPO95256 599 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 OXSR1O95747 527 aaPredicted RBP4.56□□□□□ -1.68
MATR3-202ENST00000502422 GP1BBP13224 206 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 OXTRP30559 389 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 POLR2BP30876 1174 aaKnown RBP4.56□□□□□ -1.68
MATR3-202ENST00000502422 LONP1P36776 959 aaKnown RBP4.56□□□□□ -1.68
MATR3-202ENST00000502422 MAGEA11P43364 429 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 TRPC1P48995 793 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 CSNK1EP49674 416 aaKnown RBP4.56□□□□□ -1.68
MATR3-202ENST00000502422 AFF3P51826 1226 aaKnown RBP4.56□□□□□ -1.68
MATR3-202ENST00000502422 RAP1GDS1P52306 607 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 DNAJC3Q13217 504 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 THOC5Q13769 683 aaKnown RBP4.56□□□□□ -1.68
MATR3-202ENST00000502422 SPIDRQ14159 915 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 TGFBIQ15582 683 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 MYLK3Q32MK0 819 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 SFT2D3Q587I9 215 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 TTC27Q6P3X3 843 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 RNF111Q6ZNA4 994 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 RIPOR1Q6ZS17 1223 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 RAPH1Q70E73 1250 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 ZNF571Q7Z3V5 609 aaPredicted RBP4.56□□□□□ -1.68
MATR3-202ENST00000502422 ADAT2Q7Z6V5 191 aaKnown RBP4.56□□□□□ -1.68
MATR3-202ENST00000502422 NLRP8Q86W28 1048 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 PDSS2Q86YH6 399 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 FAM186BQ8IYM0 893 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 ADGRF2Q8IZF7 708 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 FAM181AQ8N9Y4 354 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 TEX19Q8NA77 164 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 ZFP28Q8NHY6 868 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 BAHD1Q8TBE0 780 aaPredicted RBP4.56□□□□□ -1.68
MATR3-202ENST00000502422 PLEKHO2Q8TD55 490 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 DENND1AQ8TEH3 1009 aa4.56□□□□□ -1.68
MATR3-202ENST00000502422 POMGNT1Q8WZA1 660 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 631.1 ms