RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 NKD1Q969G9 470 aa14.75□□□□□ -0.05
TRAF4-212ENST00000498540 TUBGCP5Q96RT8 1024 aa14.75□□□□□ -0.05
TRAF4-212ENST00000498540 B3GNT4Q9C0J1 378 aa14.75□□□□□ -0.05
TRAF4-212ENST00000498540 EPN3Q9H201 632 aa14.75□□□□□ -0.05
TRAF4-212ENST00000498540 GANQ9H2C0 597 aa14.75□□□□□ -0.05
TRAF4-212ENST00000498540 SUDS3Q9H7L9 328 aaPredicted RBP14.75□□□□□ -0.05
TRAF4-212ENST00000498540 SPATS2LQ9NUQ6 558 aaKnown RBP14.75□□□□□ -0.05
TRAF4-212ENST00000498540 ANKMY1Q9P2S6 941 aa14.75□□□□□ -0.05
TRAF4-212ENST00000498540 MOSPD1Q9UJG1 213 aa14.75□□□□□ -0.05
TRAF4-212ENST00000498540 LRRK2Q5S007 2527 aa14.74□□□□□ -0.05
TRAF4-212ENST00000498540 IGHV5-10-1A0A0J9YXX1 117 aa14.74□□□□□ -0.05
TRAF4-212ENST00000498540 CFAP69A5D8W1 941 aa14.74□□□□□ -0.05
TRAF4-212ENST00000498540 CCP110O43303 1012 aa14.74□□□□□ -0.05
TRAF4-212ENST00000498540 HOXC4P09017 264 aaPredicted RBP14.74□□□□□ -0.05
TRAF4-212ENST00000498540 FGF3P11487 239 aaPredicted RBP14.74□□□□□ -0.05
TRAF4-212ENST00000498540 KELP23276 732 aa14.74□□□□□ -0.05
TRAF4-212ENST00000498540 ALDH4A1P30038 563 aa14.74□□□□□ -0.05
TRAF4-212ENST00000498540 TRIM23P36406 574 aa14.74□□□□□ -0.05
TRAF4-212ENST00000498540 GSCP56915 257 aaPredicted RBP14.74□□□□□ -0.05
TRAF4-212ENST00000498540 SKIDA1Q1XH10 827 aa14.74□□□□□ -0.05
TRAF4-212ENST00000498540 SCYL2Q6P3W7 929 aa14.74□□□□□ -0.05
TRAF4-212ENST00000498540 BORAQ6PGQ7 559 aa14.74□□□□□ -0.05
TRAF4-212ENST00000498540 C17orf82Q86X59 251 aaPredicted RBP14.74□□□□□ -0.05
TRAF4-212ENST00000498540 NRROSQ86YC3 692 aa14.74□□□□□ -0.05
TRAF4-212ENST00000498540 TSEN2Q8NCE0 465 aaKnown RBP14.74□□□□□ -0.05
TRAF4-212ENST00000498540 ZNF564Q8TBZ8 553 aaPredicted RBP14.74□□□□□ -0.05
TRAF4-212ENST00000498540 KIAA1524Q8TCG1 905 aa14.74□□□□□ -0.05
TRAF4-212ENST00000498540 CELF6Q96J87 481 aaKnown RBP14.74□□□□□ -0.05
TRAF4-212ENST00000498540 CCDC74BQ96LY2 380 aa14.74□□□□□ -0.05
TRAF4-212ENST00000498540 PCDHB18PQ96TA0 734 aa14.74□□□□□ -0.05
TRAF4-212ENST00000498540 ADNPQ9H2P0 1102 aa14.74□□□□□ -0.05
TRAF4-212ENST00000498540 LRRC19Q9H756 370 aa14.74□□□□□ -0.05
TRAF4-212ENST00000498540 WDR26Q9H7D7 661 aa14.74□□□□□ -0.05
TRAF4-212ENST00000498540 CATSPERBQ9H7T0 1116 aa14.74□□□□□ -0.05
TRAF4-212ENST00000498540 AKAP7Q9P0M2 348 aaPredicted RBP14.74□□□□□ -0.05
TRAF4-212ENST00000498540 FZD10Q9ULW2 581 aa14.74□□□□□ -0.05
TRAF4-212ENST00000498540 RELNP78509 3460 aa14.74□□□□□ -0.05
TRAF4-212ENST00000498540 RHPN2P1A8MT19 583 aa14.73□□□□□ -0.05
TRAF4-212ENST00000498540 A8MX80 341 aa14.73□□□□□ -0.05
TRAF4-212ENST00000498540 HGSO14964 777 aaPredicted RBP14.73□□□□□ -0.05
TRAF4-212ENST00000498540 TEX33O43247 280 aa14.73□□□□□ -0.05
TRAF4-212ENST00000498540 PRAMEF11O60813 436 aa14.73□□□□□ -0.05
TRAF4-212ENST00000498540 FGF1P05230 155 aa14.73□□□□□ -0.05
TRAF4-212ENST00000498540 UNGP13051 313 aaPredicted RBP14.73□□□□□ -0.05
TRAF4-212ENST00000498540 CCNB1P14635 433 aa14.73□□□□□ -0.05
TRAF4-212ENST00000498540 LIFP15018 202 aa14.73□□□□□ -0.05
TRAF4-212ENST00000498540 SERPINA4P29622 427 aa14.73□□□□□ -0.05
TRAF4-212ENST00000498540 KLK7P49862 253 aa14.73□□□□□ -0.05
TRAF4-212ENST00000498540 ATP1A2P50993 1020 aa14.73□□□□□ -0.05
TRAF4-212ENST00000498540 POLE2P56282 527 aa14.73□□□□□ -0.05
TRAF4-212ENST00000498540 KCNAB2Q13303 367 aa14.73□□□□□ -0.05
TRAF4-212ENST00000498540 NR1D2Q14995 579 aa14.73□□□□□ -0.05
TRAF4-212ENST00000498540 DPCR1Q3MIW9 517 aa14.73□□□□□ -0.05
TRAF4-212ENST00000498540 PNCKQ6P2M8 343 aa14.73□□□□□ -0.05
TRAF4-212ENST00000498540 DPPA4Q7L190 304 aa14.73□□□□□ -0.05
TRAF4-212ENST00000498540 SRLQ86TD4 932 aa14.73□□□□□ -0.05
TRAF4-212ENST00000498540 LURAP1LQ8IV03 231 aa14.73□□□□□ -0.05
TRAF4-212ENST00000498540 GPBAR1Q8TDU6 330 aa14.73□□□□□ -0.05
TRAF4-212ENST00000498540 ZDHHC1Q8WTX9 485 aa14.73□□□□□ -0.05
TRAF4-212ENST00000498540 PATE1Q8WXA2 126 aa14.73□□□□□ -0.05
TRAF4-212ENST00000498540 ECHDC3Q96DC8 303 aa14.73□□□□□ -0.05
TRAF4-212ENST00000498540 NSMCE3Q96MG7 304 aa14.73□□□□□ -0.05
TRAF4-212ENST00000498540 TAAR9Q96RI9 348 aa14.73□□□□□ -0.05
TRAF4-212ENST00000498540 SELENOOQ9BVL4 669 aa14.73□□□□□ -0.05
TRAF4-212ENST00000498540 ATP13A3Q9H7F0 1226 aa14.73□□□□□ -0.05
TRAF4-212ENST00000498540 CARS2Q9HA77 564 aaKnown RBP14.73□□□□□ -0.05
TRAF4-212ENST00000498540 ADAM22Q9P0K1 906 aa14.73□□□□□ -0.05
TRAF4-212ENST00000498540 NBASA2RRP1 2371 aa14.72□□□□□ -0.05
TRAF4-212ENST00000498540 FGF10O15520 208 aaPredicted RBP14.72□□□□□ -0.05
TRAF4-212ENST00000498540 ECEL1O95672 775 aa14.72□□□□□ -0.05
TRAF4-212ENST00000498540 FUCA1P04066 466 aa14.72□□□□□ -0.05
TRAF4-212ENST00000498540 MYCLP1P12525 358 aaPredicted RBP14.72□□□□□ -0.05
TRAF4-212ENST00000498540 AK4P27144 223 aaPredicted RBP14.72□□□□□ -0.05
TRAF4-212ENST00000498540 CD1CP29017 333 aa14.72□□□□□ -0.05
TRAF4-212ENST00000498540 UGT1A3P35503 534 aa14.72□□□□□ -0.05
TRAF4-212ENST00000498540 STAT1P42224 750 aa14.72□□□□□ -0.05
TRAF4-212ENST00000498540 NSFP46459 744 aaKnown RBP14.72□□□□□ -0.05
TRAF4-212ENST00000498540 CSNK1DP48730 415 aa14.72□□□□□ -0.05
TRAF4-212ENST00000498540 JAM2P57087 298 aa14.72□□□□□ -0.05
TRAF4-212ENST00000498540 TSR1Q2NL82 804 aaKnown RBP14.72□□□□□ -0.05
TRAF4-212ENST00000498540 AFMIDQ63HM1 303 aa14.72□□□□□ -0.05
TRAF4-212ENST00000498540 TRIM72Q6ZMU5 477 aa14.72□□□□□ -0.05
TRAF4-212ENST00000498540 IL22RA1Q8N6P7 574 aa14.72□□□□□ -0.05
TRAF4-212ENST00000498540 C3orf20Q8ND61 904 aa14.72□□□□□ -0.05
TRAF4-212ENST00000498540 PTCD2Q8WV60 388 aaKnown RBP14.72□□□□□ -0.05
TRAF4-212ENST00000498540 ART4Q93070 314 aa14.72□□□□□ -0.05
TRAF4-212ENST00000498540 SAMSN1Q9NSI8 373 aaKnown RBP14.72□□□□□ -0.05
TRAF4-212ENST00000498540 TAAR2Q9P1P5 351 aa14.72□□□□□ -0.05
TRAF4-212ENST00000498540 PCDHGA3Q9Y5H0 932 aa14.72□□□□□ -0.05
TRAF4-212ENST00000498540 ST14Q9Y5Y6 855 aa14.72□□□□□ -0.05
TRAF4-212ENST00000498540 B3GALT1Q9Y5Z6 326 aa14.72□□□□□ -0.05
TRAF4-212ENST00000498540 TCRBV5S1A1TA0A578 114 aa14.71□□□□□ -0.05
TRAF4-212ENST00000498540 SIGLEC16A6NMB1 481 aa14.71□□□□□ -0.05
TRAF4-212ENST00000498540 EPHB6O15197 1021 aa14.71□□□□□ -0.05
TRAF4-212ENST00000498540 CEACAM5P06731 702 aa14.71□□□□□ -0.05
TRAF4-212ENST00000498540 MPSTP25325 297 aa14.71□□□□□ -0.05
TRAF4-212ENST00000498540 CSF2RBP32927 897 aa14.71□□□□□ -0.05
TRAF4-212ENST00000498540 SOX5P35711 763 aa14.71□□□□□ -0.05
TRAF4-212ENST00000498540 PAPOLAP51003 745 aaKnown RBP14.71□□□□□ -0.05
TRAF4-212ENST00000498540 ZNF143P52747 638 aaPredicted RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms