RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 A8MX80 341 aa16.12■□□□□ 0.17
MUC1-220ENST00000498431 EPHB6O15197 1021 aa16.12■□□□□ 0.17
MUC1-220ENST00000498431 PPFIA2O75334 1257 aa16.12■□□□□ 0.17
MUC1-220ENST00000498431 TRIM23P36406 574 aa16.12■□□□□ 0.17
MUC1-220ENST00000498431 GSCP56915 257 aaPredicted RBP16.12■□□□□ 0.17
MUC1-220ENST00000498431 TLE1Q04724 770 aa16.12■□□□□ 0.17
MUC1-220ENST00000498431 GRM3Q14832 879 aa16.12■□□□□ 0.17
MUC1-220ENST00000498431 CFAP58Q5T655 872 aa16.12■□□□□ 0.17
MUC1-220ENST00000498431 TSEN2Q8NCE0 465 aaKnown RBP16.12■□□□□ 0.17
MUC1-220ENST00000498431 CELF6Q96J87 481 aaKnown RBP16.12■□□□□ 0.17
MUC1-220ENST00000498431 NSMCE3Q96MG7 304 aa16.12■□□□□ 0.17
MUC1-220ENST00000498431 SELENOOQ9BVL4 669 aa16.12■□□□□ 0.17
MUC1-220ENST00000498431 SLC12A9Q9BXP2 914 aa16.12■□□□□ 0.17
MUC1-220ENST00000498431 SLC25A18Q9H1K4 315 aa16.12■□□□□ 0.17
MUC1-220ENST00000498431 SUDS3Q9H7L9 328 aaPredicted RBP16.12■□□□□ 0.17
MUC1-220ENST00000498431 GEMIN8Q9NWZ8 242 aaKnown RBP16.12■□□□□ 0.17
MUC1-220ENST00000498431 TAB2Q9NYJ8 693 aa16.12■□□□□ 0.17
MUC1-220ENST00000498431 ADAM22Q9P0K1 906 aa16.12■□□□□ 0.17
MUC1-220ENST00000498431 MOSPD1Q9UJG1 213 aa16.12■□□□□ 0.17
MUC1-220ENST00000498431 UTP20O75691 2785 aaKnown RBP16.12■□□□□ 0.17
MUC1-220ENST00000498431 PRSS38A1L453 326 aa16.11■□□□□ 0.17
MUC1-220ENST00000498431 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.11■□□□□ 0.17
MUC1-220ENST00000498431 TNFRSF10CO14798 259 aa16.11■□□□□ 0.17
MUC1-220ENST00000498431 PRAMEF11O60813 436 aa16.11■□□□□ 0.17
MUC1-220ENST00000498431 FUCA1P04066 466 aa16.11■□□□□ 0.17
MUC1-220ENST00000498431 ELFN1P0C7U0 828 aa16.11■□□□□ 0.17
MUC1-220ENST00000498431 SFTPCP11686 197 aa16.11■□□□□ 0.17
MUC1-220ENST00000498431 ALDH4A1P30038 563 aa16.11■□□□□ 0.17
MUC1-220ENST00000498431 SOX5P35711 763 aa16.11■□□□□ 0.17
MUC1-220ENST00000498431 JAM2P57087 298 aa16.11■□□□□ 0.17
MUC1-220ENST00000498431 POLR2FP61218 127 aaKnown RBP16.11■□□□□ 0.17
MUC1-220ENST00000498431 SRLQ86TD4 932 aa16.11■□□□□ 0.17
MUC1-220ENST00000498431 PIM3Q86V86 326 aa16.11■□□□□ 0.17
MUC1-220ENST00000498431 PTRH1Q86Y79 214 aaKnown RBP16.11■□□□□ 0.17
MUC1-220ENST00000498431 NRROSQ86YC3 692 aa16.11■□□□□ 0.17
MUC1-220ENST00000498431 C3orf20Q8ND61 904 aa16.11■□□□□ 0.17
MUC1-220ENST00000498431 PTCD2Q8WV60 388 aaKnown RBP16.11■□□□□ 0.17
MUC1-220ENST00000498431 ECHDC3Q96DC8 303 aa16.11■□□□□ 0.17
MUC1-220ENST00000498431 TUBGCP5Q96RT8 1024 aa16.11■□□□□ 0.17
MUC1-220ENST00000498431 CATSPERBQ9H7T0 1116 aa16.11■□□□□ 0.17
MUC1-220ENST00000498431 NLRC4Q9NPP4 1024 aa16.11■□□□□ 0.17
MUC1-220ENST00000498431 GPATCH2LQ9NWQ4 482 aa16.11■□□□□ 0.17
MUC1-220ENST00000498431 LRRK2Q5S007 2527 aa16.1■□□□□ 0.17
MUC1-220ENST00000498431 IGHV5-10-1A0A0J9YXX1 117 aa16.1■□□□□ 0.17
MUC1-220ENST00000498431 TCRBV5S1A1TA0A578 114 aa16.1■□□□□ 0.17
MUC1-220ENST00000498431 SIGLEC16A6NMB1 481 aa16.1■□□□□ 0.17
MUC1-220ENST00000498431 TEX33O43247 280 aa16.1■□□□□ 0.17
MUC1-220ENST00000498431 CPNE6O95741 557 aa16.1■□□□□ 0.17
MUC1-220ENST00000498431 FGF1P05230 155 aa16.1■□□□□ 0.17
MUC1-220ENST00000498431 HOXC4P09017 264 aaPredicted RBP16.1■□□□□ 0.17
MUC1-220ENST00000498431 FGF3P11487 239 aaPredicted RBP16.1■□□□□ 0.17
MUC1-220ENST00000498431 CD82P27701 267 aa16.1■□□□□ 0.17
MUC1-220ENST00000498431 NSFP46459 744 aaKnown RBP16.1■□□□□ 0.17
MUC1-220ENST00000498431 PAPOLAP51003 745 aaKnown RBP16.1■□□□□ 0.17
MUC1-220ENST00000498431 RPL7AP62424 266 aaKnown RBP16.1■□□□□ 0.17
MUC1-220ENST00000498431 CLEC16AQ2KHT3 1053 aa16.1■□□□□ 0.17
MUC1-220ENST00000498431 TCP11X2Q5H9J9 407 aa16.1■□□□□ 0.17
MUC1-220ENST00000498431 AFMIDQ63HM1 303 aa16.1■□□□□ 0.17
MUC1-220ENST00000498431 PNCKQ6P2M8 343 aa16.1■□□□□ 0.17
MUC1-220ENST00000498431 TRIM72Q6ZMU5 477 aa16.1■□□□□ 0.17
MUC1-220ENST00000498431 DPPA4Q7L190 304 aa16.1■□□□□ 0.17
MUC1-220ENST00000498431 ZNF438Q7Z4V0 828 aa16.1■□□□□ 0.17
MUC1-220ENST00000498431 C17orf82Q86X59 251 aaPredicted RBP16.1■□□□□ 0.17
MUC1-220ENST00000498431 GPBAR1Q8TDU6 330 aa16.1■□□□□ 0.17
MUC1-220ENST00000498431 PATE1Q8WXA2 126 aa16.1■□□□□ 0.17
MUC1-220ENST00000498431 NKD1Q969G9 470 aa16.1■□□□□ 0.17
MUC1-220ENST00000498431 CCDC74BQ96LY2 380 aa16.1■□□□□ 0.17
MUC1-220ENST00000498431 SLC39A8Q9C0K1 460 aa16.1■□□□□ 0.17
MUC1-220ENST00000498431 WDR26Q9H7D7 661 aa16.1■□□□□ 0.17
MUC1-220ENST00000498431 ATP13A3Q9H7F0 1226 aa16.1■□□□□ 0.17
MUC1-220ENST00000498431 FAM207AQ9NSI2 230 aaPredicted RBP16.1■□□□□ 0.17
MUC1-220ENST00000498431 ST14Q9Y5Y6 855 aa16.1■□□□□ 0.17
MUC1-220ENST00000498431 CFAP69A5D8W1 941 aa16.09■□□□□ 0.17
MUC1-220ENST00000498431 GOLGA6L22H0YM25 854 aa16.09■□□□□ 0.17
MUC1-220ENST00000498431 STMND1H3BQB6 276 aa16.09■□□□□ 0.17
MUC1-220ENST00000498431 FGF10O15520 208 aaPredicted RBP16.09■□□□□ 0.17
MUC1-220ENST00000498431 CCNB1P14635 433 aa16.09■□□□□ 0.17
MUC1-220ENST00000498431 KELP23276 732 aa16.09■□□□□ 0.17
MUC1-220ENST00000498431 AK4P27144 223 aaPredicted RBP16.09■□□□□ 0.17
MUC1-220ENST00000498431 ERCC5P28715 1186 aaPredicted RBP16.09■□□□□ 0.17
MUC1-220ENST00000498431 CD1CP29017 333 aa16.09■□□□□ 0.17
MUC1-220ENST00000498431 SERPINA4P29622 427 aa16.09■□□□□ 0.17
MUC1-220ENST00000498431 CSNK1DP48730 415 aa16.09■□□□□ 0.17
MUC1-220ENST00000498431 ZNF143P52747 638 aaPredicted RBP16.09■□□□□ 0.17
MUC1-220ENST00000498431 TPI1P60174 286 aa16.09■□□□□ 0.17
MUC1-220ENST00000498431 UBE2HP62256 183 aa16.09■□□□□ 0.17
MUC1-220ENST00000498431 ARHGAP36Q6ZRI8 547 aa16.09■□□□□ 0.17
MUC1-220ENST00000498431 MON1BQ7L1V2 547 aa16.09■□□□□ 0.17
MUC1-220ENST00000498431 PHF13Q86YI8 300 aaPredicted RBP16.09■□□□□ 0.17
MUC1-220ENST00000498431 KIAA1524Q8TCG1 905 aa16.09■□□□□ 0.17
MUC1-220ENST00000498431 ZDHHC1Q8WTX9 485 aa16.09■□□□□ 0.17
MUC1-220ENST00000498431 MCEEQ96PE7 176 aa16.09■□□□□ 0.17
MUC1-220ENST00000498431 B3GNT4Q9C0J1 378 aa16.09■□□□□ 0.17
MUC1-220ENST00000498431 CARS2Q9HA77 564 aaKnown RBP16.09■□□□□ 0.17
MUC1-220ENST00000498431 TTC24A2A3L6 582 aaPredicted RBP16.08■□□□□ 0.16
MUC1-220ENST00000498431 RHPN2P1A8MT19 583 aa16.08■□□□□ 0.16
MUC1-220ENST00000498431 TRAFD1O14545 582 aaPredicted RBP16.08■□□□□ 0.16
MUC1-220ENST00000498431 PALMO75781 387 aa16.08■□□□□ 0.16
MUC1-220ENST00000498431 ECEL1O95672 775 aa16.08■□□□□ 0.16
MUC1-220ENST00000498431 CALB1P05937 261 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms