RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 TROAPQ12815 778 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 TUBB3Q13509 450 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 OLIG2Q13516 323 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 RPE65Q16518 533 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 CYP2A13Q16696 494 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 KRT24Q2M2I5 525 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 TMEM266Q2M3C6 531 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 ASTE1Q2TB18 679 aaPredicted RBP2.56□□□□□ -2
CKS1BP2-201ENST00000497342 TCEAL5Q5H9L2 206 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 SPDYAQ5MJ70 313 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 RBM20Q5T481 1227 aaKnown RBP2.56□□□□□ -2
CKS1BP2-201ENST00000497342 TEDDM1Q5T9Z0 273 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 SUSD4Q5VX71 490 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 ATG9BQ674R7 924 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 B3GNTL1Q67FW5 361 aaPredicted RBP2.56□□□□□ -2
CKS1BP2-201ENST00000497342 SLC9A4Q6AI14 798 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 NAPEPLDQ6IQ20 393 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 KRT80Q6KB66 452 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 TTI2Q6NXR4 508 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 SLC22A25Q6T423 547 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 MAMDC4Q6UXC1 1216 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 CLEC9AQ6UXN8 241 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 SDCCAG8Q86SQ7 713 aaPredicted RBP2.56□□□□□ -2
CKS1BP2-201ENST00000497342 RPAINQ86UA6 219 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 TSPAN33Q86UF1 283 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 ZNF761Q86XN6 746 aaPredicted RBP2.56□□□□□ -2
CKS1BP2-201ENST00000497342 EPHX4Q8IUS5 362 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 MCEMP1Q8IX19 187 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 FAM217AQ8IXS0 508 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 UBALD2Q8IYN6 164 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 FSTL5Q8N475 847 aaPredicted RBP2.56□□□□□ -2
CKS1BP2-201ENST00000497342 MINDY1Q8N5J2 469 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 AMER2Q8N7J2 671 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 POC5Q8NA72 575 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 TRPV1Q8NER1 839 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 OR56A1Q8NGH5 318 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 PHOSPHO2Q8TCD6 241 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 MRPL38Q96DV4 380 aaKnown RBP2.56□□□□□ -2
CKS1BP2-201ENST00000497342 KIF1BPQ96EK5 621 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 ZBTB45Q96K62 511 aaPredicted RBP2.56□□□□□ -2
CKS1BP2-201ENST00000497342 PHACTR3Q96KR7 559 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 CMTM3Q96MX0 182 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 LRRC3BQ96PB8 259 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 RAB3IPQ96QF0 476 aaPredicted RBP2.56□□□□□ -2
CKS1BP2-201ENST00000497342 RTP3Q9BQQ7 232 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 THAP7Q9BT49 309 aaPredicted RBP2.56□□□□□ -2
CKS1BP2-201ENST00000497342 SLC25A23Q9BV35 468 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 MLPHQ9BV36 600 aaPredicted RBP2.56□□□□□ -2
CKS1BP2-201ENST00000497342 SCNM1Q9BWG6 230 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 MAK16Q9BXY0 300 aaKnown RBP2.56□□□□□ -2
CKS1BP2-201ENST00000497342 MEGF9Q9H1U4 602 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 EPC1Q9H2F5 836 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 FZD8Q9H461 694 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 PLEKHA4Q9H4M7 779 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 MROH8Q9H579 483 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 ZNF768Q9H5H4 540 aaKnown RBP2.56□□□□□ -2
CKS1BP2-201ENST00000497342 TTC12Q9H892 705 aaPredicted RBP2.56□□□□□ -2
CKS1BP2-201ENST00000497342 KAT14Q9H8E8 782 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 MRPL44Q9H9J2 332 aaKnown RBP2.56□□□□□ -2
CKS1BP2-201ENST00000497342 MRGBPQ9NV56 204 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 TRMT1Q9NXH9 659 aaKnown RBP2.56□□□□□ -2
CKS1BP2-201ENST00000497342 ALKBH4Q9NXW9 302 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 FAM53CQ9NYF3 392 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 MRPL15Q9P015 296 aaKnown RBP2.56□□□□□ -2
CKS1BP2-201ENST00000497342 UBA2Q9UBT2 640 aaPredicted RBP2.56□□□□□ -2
CKS1BP2-201ENST00000497342 ZNF70Q9UC06 446 aaPredicted RBP2.56□□□□□ -2
CKS1BP2-201ENST00000497342 STK17AQ9UEE5 414 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 RASAL2Q9UJF2 1139 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 TUBE1Q9UJT0 475 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 INTS6Q9UL03 887 aaKnown RBP2.56□□□□□ -2
CKS1BP2-201ENST00000497342 ODF2LQ9ULJ1 636 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 SLC12A4Q9UP95 1085 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 MTMR6Q9Y217 621 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.56□□□□□ -2
CKS1BP2-201ENST00000497342 SESN1Q9Y6P5 492 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 CAPN7Q9Y6W3 813 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 COL4A1P02462 1669 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 COL6A5A8TX70 2615 aa2.55□□□□□ -2
CKS1BP2-201ENST00000497342 TBC1D3DA0A087WVF3 549 aa2.55□□□□□ -2
CKS1BP2-201ENST00000497342 TBC1D3IA0A087WXS9 549 aa2.55□□□□□ -2
CKS1BP2-201ENST00000497342 TBC1D3EA0A087X179 549 aa2.55□□□□□ -2
CKS1BP2-201ENST00000497342 TBC1D3KA0A087X1G2 549 aa2.55□□□□□ -2
CKS1BP2-201ENST00000497342 LOC102723996A0A087X1L8 192 aa2.55□□□□□ -2
CKS1BP2-201ENST00000497342 A0A1W2PR77 199 aa2.55□□□□□ -2
CKS1BP2-201ENST00000497342 TBC1D3BA6NDS4 549 aa2.55□□□□□ -2
CKS1BP2-201ENST00000497342 TBC1D3FA6NER0 549 aaPredicted RBP2.55□□□□□ -2
CKS1BP2-201ENST00000497342 WIPF3A6NGB9 483 aa2.55□□□□□ -2
CKS1BP2-201ENST00000497342 TRIM64A6NGJ6 449 aa2.55□□□□□ -2
CKS1BP2-201ENST00000497342 TRIM64BA6NI03 449 aa2.55□□□□□ -2
CKS1BP2-201ENST00000497342 CBY3A6NI87 242 aa2.55□□□□□ -2
CKS1BP2-201ENST00000497342 AGAP5A6NIR3 686 aa2.55□□□□□ -2
CKS1BP2-201ENST00000497342 TBC1D3LB9A6J9 549 aa2.55□□□□□ -2
CKS1BP2-201ENST00000497342 BIN1O00499 593 aa2.55□□□□□ -2
CKS1BP2-201ENST00000497342 PER2O15055 1255 aa2.55□□□□□ -2
CKS1BP2-201ENST00000497342 MUSKO15146 869 aa2.55□□□□□ -2
CKS1BP2-201ENST00000497342 SLC16A3O15427 465 aaKnown RBP2.55□□□□□ -2
CKS1BP2-201ENST00000497342 ASAP2O43150 1006 aa2.55□□□□□ -2
CKS1BP2-201ENST00000497342 STX6O43752 255 aa2.55□□□□□ -2
CKS1BP2-201ENST00000497342 TMPRSS11DO60235 418 aa2.55□□□□□ -2
CKS1BP2-201ENST00000497342 B4GALT3O60512 393 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms