RNA–Protein interactions for RNA: ENST00000497318.1

SUPT20H-223, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 3

Gene SUPT20H, Length 734 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-223ENST00000497318 LACTB2Q53H82 288 aaPredicted RBP16.63■□□□□ 0.25
SUPT20H-223ENST00000497318 KCTD16Q68DU8 428 aa16.63■□□□□ 0.25
SUPT20H-223ENST00000497318 TRNP1Q6NT89 227 aa16.63■□□□□ 0.25
SUPT20H-223ENST00000497318 C17orf82Q86X59 251 aaPredicted RBP16.63■□□□□ 0.25
SUPT20H-223ENST00000497318 SFTPA2Q8IWL1 248 aa16.63■□□□□ 0.25
SUPT20H-223ENST00000497318 TUBGCP5Q96RT8 1024 aa16.63■□□□□ 0.25
SUPT20H-223ENST00000497318 PLAAQ9Y263 795 aa16.63■□□□□ 0.25
SUPT20H-223ENST00000497318 SCN8AQ9UQD0 1980 aa16.63■□□□□ 0.25
SUPT20H-223ENST00000497318 PRSS38A1L453 326 aa16.62■□□□□ 0.25
SUPT20H-223ENST00000497318 FAM72CH0Y354 149 aa16.62■□□□□ 0.25
SUPT20H-223ENST00000497318 NKX2-8O15522 239 aa16.62■□□□□ 0.25
SUPT20H-223ENST00000497318 FGF1P05230 155 aa16.62■□□□□ 0.25
SUPT20H-223ENST00000497318 ELFN1P0C7U0 828 aa16.62■□□□□ 0.25
SUPT20H-223ENST00000497318 MAZP56270 477 aaKnown RBP16.62■□□□□ 0.25
SUPT20H-223ENST00000497318 KLRB1Q12918 225 aa16.62■□□□□ 0.25
SUPT20H-223ENST00000497318 SQSTM1Q13501 440 aa16.62■□□□□ 0.25
SUPT20H-223ENST00000497318 FAM72AQ5TYM5 149 aa16.62■□□□□ 0.25
SUPT20H-223ENST00000497318 TAF3Q5VWG9 929 aa16.62■□□□□ 0.25
SUPT20H-223ENST00000497318 FAM72DQ6L9T8 149 aa16.62■□□□□ 0.25
SUPT20H-223ENST00000497318 FAM72BQ86X60 149 aa16.62■□□□□ 0.25
SUPT20H-223ENST00000497318 FAM129CQ86XR2 697 aa16.62■□□□□ 0.25
SUPT20H-223ENST00000497318 NRSN1Q8IZ57 195 aa16.62■□□□□ 0.25
SUPT20H-223ENST00000497318 NLGN4XQ8N0W4 816 aa16.62■□□□□ 0.25
SUPT20H-223ENST00000497318 EMC1Q8N766 993 aa16.62■□□□□ 0.25
SUPT20H-223ENST00000497318 RTL3Q8N8U3 475 aaKnown RBP16.62■□□□□ 0.25
SUPT20H-223ENST00000497318 NLGN4YQ8NFZ3 816 aaPredicted RBP16.62■□□□□ 0.25
SUPT20H-223ENST00000497318 CCL4L1Q8NHW4 92 aa16.62■□□□□ 0.25
SUPT20H-223ENST00000497318 ABHD17AQ96GS6 310 aa16.62■□□□□ 0.25
SUPT20H-223ENST00000497318 EXOC2Q96KP1 924 aa16.62■□□□□ 0.25
SUPT20H-223ENST00000497318 ATP13A3Q9H7F0 1226 aa16.62■□□□□ 0.25
SUPT20H-223ENST00000497318 CARS2Q9HA77 564 aaKnown RBP16.62■□□□□ 0.25
SUPT20H-223ENST00000497318 SPATS2LQ9NUQ6 558 aaKnown RBP16.62■□□□□ 0.25
SUPT20H-223ENST00000497318 DONSONQ9NYP3 566 aa16.62■□□□□ 0.25
SUPT20H-223ENST00000497318 UBA2Q9UBT2 640 aaPredicted RBP16.62■□□□□ 0.25
SUPT20H-223ENST00000497318 RELNP78509 3460 aa16.62■□□□□ 0.25
SUPT20H-223ENST00000497318 DOCK4Q8N1I0 1966 aa16.62■□□□□ 0.25
SUPT20H-223ENST00000497318 RASA4BC9J798 803 aa16.61■□□□□ 0.25
SUPT20H-223ENST00000497318 TEX33O43247 280 aa16.61■□□□□ 0.25
SUPT20H-223ENST00000497318 RASA4O43374 803 aa16.61■□□□□ 0.25
SUPT20H-223ENST00000497318 ECEL1O95672 775 aa16.61■□□□□ 0.25
SUPT20H-223ENST00000497318 PNMA6AP0CW24 399 aaPredicted RBP16.61■□□□□ 0.25
SUPT20H-223ENST00000497318 PRKAR1AP10644 381 aa16.61■□□□□ 0.25
SUPT20H-223ENST00000497318 EPHB2P29323 1055 aa16.61■□□□□ 0.25
SUPT20H-223ENST00000497318 SERPINA4P29622 427 aa16.61■□□□□ 0.25
SUPT20H-223ENST00000497318 MTIF2P46199 727 aaKnown RBP16.61■□□□□ 0.25
SUPT20H-223ENST00000497318 ARSDP51689 593 aa16.61■□□□□ 0.25
SUPT20H-223ENST00000497318 COPB1P53618 953 aaKnown RBP16.61■□□□□ 0.25
SUPT20H-223ENST00000497318 CYTH1Q15438 398 aa16.61■□□□□ 0.25
SUPT20H-223ENST00000497318 C2CD6Q53TS8 623 aa16.61■□□□□ 0.25
SUPT20H-223ENST00000497318 PNCKQ6P2M8 343 aa16.61■□□□□ 0.25
SUPT20H-223ENST00000497318 STRADAQ7RTN6 431 aa16.61■□□□□ 0.25
SUPT20H-223ENST00000497318 CAMK1DQ8IU85 385 aa16.61■□□□□ 0.25
SUPT20H-223ENST00000497318 NETO2Q8NC67 525 aa16.61■□□□□ 0.25
SUPT20H-223ENST00000497318 RXFP2Q8WXD0 754 aa16.61■□□□□ 0.25
SUPT20H-223ENST00000497318 CPA5Q8WXQ8 436 aa16.61■□□□□ 0.25
SUPT20H-223ENST00000497318 MIB2Q96AX9 1013 aa16.61■□□□□ 0.25
SUPT20H-223ENST00000497318 ZPBPQ9BS86 351 aa16.61■□□□□ 0.25
SUPT20H-223ENST00000497318 ZMYND15Q9H091 742 aa16.61■□□□□ 0.25
SUPT20H-223ENST00000497318 TRIT1Q9H3H1 467 aaKnown RBP16.61■□□□□ 0.25
SUPT20H-223ENST00000497318 SIX2Q9NPC8 291 aa16.61■□□□□ 0.25
SUPT20H-223ENST00000497318 METTL5Q9NRN9 209 aaKnown RBP16.61■□□□□ 0.25
SUPT20H-223ENST00000497318 PHPT1Q9NRX4 125 aaPredicted RBP16.61■□□□□ 0.25
SUPT20H-223ENST00000497318 TRNAU1APQ9NX07 287 aaKnown RBP16.61■□□□□ 0.25
SUPT20H-223ENST00000497318 TAAR2Q9P1P5 351 aa16.61■□□□□ 0.25
SUPT20H-223ENST00000497318 LHX3Q9UBR4 397 aa16.61■□□□□ 0.25
SUPT20H-223ENST00000497318 PILRAQ9UKJ1 303 aa16.61■□□□□ 0.25
SUPT20H-223ENST00000497318 PRR19A6NJB7 356 aa16.6■□□□□ 0.25
SUPT20H-223ENST00000497318 ENO4A6NNW6 628 aa16.6■□□□□ 0.25
SUPT20H-223ENST00000497318 EFCAB7A8K855 629 aa16.6■□□□□ 0.25
SUPT20H-223ENST00000497318 CD97P48960 835 aa16.6■□□□□ 0.25
SUPT20H-223ENST00000497318 CDC20Q12834 499 aa16.6■□□□□ 0.25
SUPT20H-223ENST00000497318 BECN1Q14457 450 aa16.6■□□□□ 0.25
SUPT20H-223ENST00000497318 C15orf59Q2T9L4 293 aaPredicted RBP16.6■□□□□ 0.25
SUPT20H-223ENST00000497318 DEFB109BQ30KR1 87 aa16.6■□□□□ 0.25
SUPT20H-223ENST00000497318 CCDC14Q49A88 953 aa16.6■□□□□ 0.25
SUPT20H-223ENST00000497318 KDELC2Q7Z4H8 507 aa16.6■□□□□ 0.25
SUPT20H-223ENST00000497318 TEX19Q8NA77 164 aa16.6■□□□□ 0.25
SUPT20H-223ENST00000497318 PMEPA1Q969W9 287 aa16.6■□□□□ 0.25
SUPT20H-223ENST00000497318 NOL6Q9H6R4 1146 aaKnown RBP16.6■□□□□ 0.25
SUPT20H-223ENST00000497318 CATSPERBQ9H7T0 1116 aa16.6■□□□□ 0.25
SUPT20H-223ENST00000497318 KCTD5Q9NXV2 234 aa16.6■□□□□ 0.25
SUPT20H-223ENST00000497318 KCNK4Q9NYG8 393 aa16.6■□□□□ 0.25
SUPT20H-223ENST00000497318 RWDD2AQ9UIY3 292 aa16.6■□□□□ 0.25
SUPT20H-223ENST00000497318 AJAP1Q9UKB5 411 aaPredicted RBP16.6■□□□□ 0.25
SUPT20H-223ENST00000497318 NEU3Q9UQ49 428 aa16.6■□□□□ 0.25
SUPT20H-223ENST00000497318 FAM170AA1A519 330 aa16.59■□□□□ 0.25
SUPT20H-223ENST00000497318 BUB1BO60566 1050 aaPredicted RBP16.59■□□□□ 0.25
SUPT20H-223ENST00000497318 PRKCGP05129 697 aa16.59■□□□□ 0.25
SUPT20H-223ENST00000497318 THRAP10827 490 aa16.59■□□□□ 0.25
SUPT20H-223ENST00000497318 MYCLP1P12525 358 aaPredicted RBP16.59■□□□□ 0.25
SUPT20H-223ENST00000497318 ERCC5P28715 1186 aaPredicted RBP16.59■□□□□ 0.25
SUPT20H-223ENST00000497318 PTPN9P43378 593 aa16.59■□□□□ 0.25
SUPT20H-223ENST00000497318 CSNK1DP48730 415 aa16.59■□□□□ 0.25
SUPT20H-223ENST00000497318 PPM1FP49593 454 aaPredicted RBP16.59■□□□□ 0.25
SUPT20H-223ENST00000497318 GPLD1P80108 840 aa16.59■□□□□ 0.25
SUPT20H-223ENST00000497318 ACOX1Q15067 660 aa16.59■□□□□ 0.25
SUPT20H-223ENST00000497318 CRTC2Q53ET0 693 aaPredicted RBP16.59■□□□□ 0.25
SUPT20H-223ENST00000497318 NKAIN2Q5VXU1 208 aa16.59■□□□□ 0.25
SUPT20H-223ENST00000497318 NAA35Q5VZE5 725 aa16.59■□□□□ 0.25
SUPT20H-223ENST00000497318 AFMIDQ63HM1 303 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms