RNA–Protein interactions for RNA: ENST00000497311.5

SMC4-226, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-226ENST00000497311 AMPD1P23109 780 aa17.2■□□□□ 0.34
SMC4-226ENST00000497311 TRIM23P36406 574 aa17.2■□□□□ 0.34
SMC4-226ENST00000497311 HSPA9P38646 679 aaKnown RBP17.2■□□□□ 0.34
SMC4-226ENST00000497311 MLLT3P42568 568 aaPredicted RBP17.2■□□□□ 0.34
SMC4-226ENST00000497311 PDX1P52945 283 aa17.2■□□□□ 0.34
SMC4-226ENST00000497311 PIGHQ14442 188 aaPredicted RBP17.2■□□□□ 0.34
SMC4-226ENST00000497311 ACOX1Q15067 660 aa17.2■□□□□ 0.34
SMC4-226ENST00000497311 FIGNQ5HY92 759 aa17.2■□□□□ 0.34
SMC4-226ENST00000497311 KCTD16Q68DU8 428 aa17.2■□□□□ 0.34
SMC4-226ENST00000497311 CAVIN1Q6NZI2 390 aaKnown RBP17.2■□□□□ 0.34
SMC4-226ENST00000497311 POLNQ7Z5Q5 900 aa17.2■□□□□ 0.34
SMC4-226ENST00000497311 TAF8Q7Z7C8 310 aa17.2■□□□□ 0.34
SMC4-226ENST00000497311 BBS5Q8N3I7 341 aa17.2■□□□□ 0.34
SMC4-226ENST00000497311 OR1E3Q8WZA6 343 aa17.2■□□□□ 0.34
SMC4-226ENST00000497311 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.2■□□□□ 0.34
SMC4-226ENST00000497311 CPNE5Q9HCH3 593 aa17.2■□□□□ 0.34
SMC4-226ENST00000497311 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.2■□□□□ 0.34
SMC4-226ENST00000497311 ETNK2Q9NVF9 386 aa17.2■□□□□ 0.34
SMC4-226ENST00000497311 B4GALT6Q9UBX8 382 aa17.2■□□□□ 0.34
SMC4-226ENST00000497311 RABGEF1Q9UJ41 708 aa17.2■□□□□ 0.34
SMC4-226ENST00000497311 PCDHGC4Q9Y5F7 938 aa17.2■□□□□ 0.34
SMC4-226ENST00000497311 TTC24A2A3L6 582 aaPredicted RBP17.19■□□□□ 0.34
SMC4-226ENST00000497311 CDRT15L2A8MXV6 281 aa17.19■□□□□ 0.34
SMC4-226ENST00000497311 TMX2-CTNND1H3BSU7 103 aa17.19■□□□□ 0.34
SMC4-226ENST00000497311 PDE2AO00408 941 aaPredicted RBP17.19■□□□□ 0.34
SMC4-226ENST00000497311 TNFRSF10CO14798 259 aa17.19■□□□□ 0.34
SMC4-226ENST00000497311 HTRA2O43464 458 aaPredicted RBP17.19■□□□□ 0.34
SMC4-226ENST00000497311 SOCS5O75159 536 aa17.19■□□□□ 0.34
SMC4-226ENST00000497311 TNFSF15O95150 251 aa17.19■□□□□ 0.34
SMC4-226ENST00000497311 TCF4P15884 667 aa17.19■□□□□ 0.34
SMC4-226ENST00000497311 GM2AP17900 193 aa17.19■□□□□ 0.34
SMC4-226ENST00000497311 NFKBIAP25963 317 aa17.19■□□□□ 0.34
SMC4-226ENST00000497311 CCL7P80098 99 aa17.19■□□□□ 0.34
SMC4-226ENST00000497311 IQCB1Q15051 598 aa17.19■□□□□ 0.34
SMC4-226ENST00000497311 TDRD12Q587J7 1177 aaKnown RBP17.19■□□□□ 0.34
SMC4-226ENST00000497311 ARHGAP40Q5TG30 622 aa17.19■□□□□ 0.34
SMC4-226ENST00000497311 PNCKQ6P2M8 343 aa17.19■□□□□ 0.34
SMC4-226ENST00000497311 GPR156Q8NFN8 814 aa17.19■□□□□ 0.34
SMC4-226ENST00000497311 PDCD6IPQ8WUM4 868 aaKnown RBP17.19■□□□□ 0.34
SMC4-226ENST00000497311 NSMCE1Q8WV22 266 aa17.19■□□□□ 0.34
SMC4-226ENST00000497311 SPOCK2Q92563 424 aa17.19■□□□□ 0.34
SMC4-226ENST00000497311 LIN37Q96GY3 246 aaPredicted RBP17.19■□□□□ 0.34
SMC4-226ENST00000497311 CSPG4P5Q96PW8 444 aa17.19■□□□□ 0.34
SMC4-226ENST00000497311 NUDCD1Q96RS6 583 aa17.19■□□□□ 0.34
SMC4-226ENST00000497311 LGR4Q9BXB1 951 aa17.19■□□□□ 0.34
SMC4-226ENST00000497311 WDR26Q9H7D7 661 aa17.19■□□□□ 0.34
SMC4-226ENST00000497311 FGF22Q9HCT0 170 aa17.19■□□□□ 0.34
SMC4-226ENST00000497311 MRPL40Q9NQ50 206 aaKnown RBP17.19■□□□□ 0.34
SMC4-226ENST00000497311 KCTD5Q9NXV2 234 aa17.19■□□□□ 0.34
SMC4-226ENST00000497311 MOSPD1Q9UJG1 213 aa17.19■□□□□ 0.34
SMC4-226ENST00000497311 BZW2Q9Y6E2 419 aaKnown RBP17.19■□□□□ 0.34
SMC4-226ENST00000497311 MGAQ8IWI9 3026 aa17.19■□□□□ 0.34
SMC4-226ENST00000497311 PMS2P1A4D2B8 440 aa17.18■□□□□ 0.34
SMC4-226ENST00000497311 MAFKO60675 156 aa17.18■□□□□ 0.34
SMC4-226ENST00000497311 PEX11BO96011 259 aa17.18■□□□□ 0.34
SMC4-226ENST00000497311 CPP00450 1065 aa17.18■□□□□ 0.34
SMC4-226ENST00000497311 RPLP0P05388 317 aaKnown RBP17.18■□□□□ 0.34
SMC4-226ENST00000497311 RARAP10276 462 aa17.18■□□□□ 0.34
SMC4-226ENST00000497311 CR2P20023 1033 aa17.18■□□□□ 0.34
SMC4-226ENST00000497311 SERPINB6P35237 376 aa17.18■□□□□ 0.34
SMC4-226ENST00000497311 SKOR1P84550 965 aa17.18■□□□□ 0.34
SMC4-226ENST00000497311 OGFOD3Q6PK18 319 aa17.18■□□□□ 0.34
SMC4-226ENST00000497311 CLEC14AQ86T13 490 aa17.18■□□□□ 0.34
SMC4-226ENST00000497311 ATPAF2Q8N5M1 289 aa17.18■□□□□ 0.34
SMC4-226ENST00000497311 FAM46DQ8NEK8 389 aa17.18■□□□□ 0.34
SMC4-226ENST00000497311 TEKT4Q8WW24 435 aa17.18■□□□□ 0.34
SMC4-226ENST00000497311 NUS1Q96E22 293 aa17.18■□□□□ 0.34
SMC4-226ENST00000497311 COQ10AQ96MF6 247 aa17.18■□□□□ 0.34
SMC4-226ENST00000497311 STRADBQ9C0K7 418 aa17.18■□□□□ 0.34
SMC4-226ENST00000497311 TMEM168Q9H0V1 697 aa17.18■□□□□ 0.34
SMC4-226ENST00000497311 LRRN3Q9H3W5 708 aa17.18■□□□□ 0.34
SMC4-226ENST00000497311 NOD2Q9HC29 1040 aa17.18■□□□□ 0.34
SMC4-226ENST00000497311 EPB41L5Q9HCM4 733 aa17.18■□□□□ 0.34
SMC4-226ENST00000497311 CYP4F12Q9HCS2 524 aa17.18■□□□□ 0.34
SMC4-226ENST00000497311 PHTF1Q9UMS5 762 aa17.18■□□□□ 0.34
SMC4-226ENST00000497311 UNC13CQ8NB66 2214 aa17.18■□□□□ 0.34
SMC4-226ENST00000497311 A0A1W2PQM1 296 aa17.17■□□□□ 0.34
SMC4-226ENST00000497311 D6RAR5 112 aa17.17■□□□□ 0.34
SMC4-226ENST00000497311 ERVH48-1M5A8F1 160 aa17.17■□□□□ 0.34
SMC4-226ENST00000497311 PLD2O14939 933 aa17.17■□□□□ 0.34
SMC4-226ENST00000497311 ITGA2BP08514 1039 aa17.17■□□□□ 0.34
SMC4-226ENST00000497311 PNLIPP16233 465 aa17.17■□□□□ 0.34
SMC4-226ENST00000497311 GLB1P16278 677 aa17.17■□□□□ 0.34
SMC4-226ENST00000497311 VIPR1P32241 457 aa17.17■□□□□ 0.34
SMC4-226ENST00000497311 INHBCP55103 352 aa17.17■□□□□ 0.34
SMC4-226ENST00000497311 CDH6P55285 790 aa17.17■□□□□ 0.34
SMC4-226ENST00000497311 TPM4P67936 248 aa17.17■□□□□ 0.34
SMC4-226ENST00000497311 RHDQ02161 417 aa17.17■□□□□ 0.34
SMC4-226ENST00000497311 VAC14Q08AM6 782 aa17.17■□□□□ 0.34
SMC4-226ENST00000497311 EIF3IQ13347 325 aaKnown RBP17.17■□□□□ 0.34
SMC4-226ENST00000497311 CNGA3Q16281 694 aa17.17■□□□□ 0.34
SMC4-226ENST00000497311 TSR1Q2NL82 804 aaKnown RBP17.17■□□□□ 0.34
SMC4-226ENST00000497311 TAF1BQ53T94 588 aaPredicted RBP17.17■□□□□ 0.34
SMC4-226ENST00000497311 RALGPS1Q5JS13 557 aa17.17■□□□□ 0.34
SMC4-226ENST00000497311 MARC1Q5VT66 337 aa17.17■□□□□ 0.34
SMC4-226ENST00000497311 HGSNATQ68CP4 663 aa17.17■□□□□ 0.34
SMC4-226ENST00000497311 DENND2CQ68D51 928 aa17.17■□□□□ 0.34
SMC4-226ENST00000497311 B3GNT8Q7Z7M8 397 aa17.17■□□□□ 0.34
SMC4-226ENST00000497311 PELI3Q8N2H9 469 aa17.17■□□□□ 0.34
SMC4-226ENST00000497311 PGBD5Q8N414 524 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms