RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 SLC18A3Q16572 532 aa12.78□□□□□ -0.36
PTPRF-214ENST00000496043 ISXQ2M1V0 245 aa12.78□□□□□ -0.36
PTPRF-214ENST00000496043 PERM1Q5SV97 790 aa12.78□□□□□ -0.36
PTPRF-214ENST00000496043 SPECC1LQ69YQ0 1117 aa12.78□□□□□ -0.36
PTPRF-214ENST00000496043 PNCKQ6P2M8 343 aa12.78□□□□□ -0.36
PTPRF-214ENST00000496043 NDUFAF2Q8N183 169 aa12.78□□□□□ -0.36
PTPRF-214ENST00000496043 CBARPQ8N350 705 aaPredicted RBP12.78□□□□□ -0.36
PTPRF-214ENST00000496043 TEX26Q8N6G2 289 aa12.78□□□□□ -0.36
PTPRF-214ENST00000496043 OR56A4Q8NGH8 313 aa12.78□□□□□ -0.36
PTPRF-214ENST00000496043 FUBP1Q96AE4 644 aaKnown RBP12.78□□□□□ -0.36
PTPRF-214ENST00000496043 SCRN2Q96FV2 425 aa12.78□□□□□ -0.36
PTPRF-214ENST00000496043 DEF6Q9H4E7 631 aa12.78□□□□□ -0.36
PTPRF-214ENST00000496043 NT5MQ9NPB1 228 aa12.78□□□□□ -0.36
PTPRF-214ENST00000496043 NENFQ9UMX5 172 aa12.78□□□□□ -0.36
PTPRF-214ENST00000496043 GPR34Q9UPC5 381 aa12.78□□□□□ -0.36
PTPRF-214ENST00000496043 DGKBQ9Y6T7 804 aa12.78□□□□□ -0.36
PTPRF-214ENST00000496043 APC2O95996 2303 aa12.78□□□□□ -0.36
PTPRF-214ENST00000496043 PKD1L2Q7Z442 2459 aa12.78□□□□□ -0.36
PTPRF-214ENST00000496043 DMXL2Q8TDJ6 3036 aa12.77□□□□□ -0.36
PTPRF-214ENST00000496043 SSU72P8A0A1W2PR75 194 aa12.77□□□□□ -0.37
PTPRF-214ENST00000496043 TMEM202A6NGA9 273 aa12.77□□□□□ -0.37
PTPRF-214ENST00000496043 MATN3O15232 486 aa12.77□□□□□ -0.37
PTPRF-214ENST00000496043 TCEA3O75764 348 aa12.77□□□□□ -0.37
PTPRF-214ENST00000496043 CELA2BP08218 269 aaPredicted RBP12.77□□□□□ -0.37
PTPRF-214ENST00000496043 CD48P09326 243 aa12.77□□□□□ -0.37
PTPRF-214ENST00000496043 TPM1P09493 284 aa12.77□□□□□ -0.37
PTPRF-214ENST00000496043 CCNCP24863 283 aa12.77□□□□□ -0.37
PTPRF-214ENST00000496043 GJC1P36383 396 aa12.77□□□□□ -0.37
PTPRF-214ENST00000496043 ABCG1P45844 678 aa12.77□□□□□ -0.37
PTPRF-214ENST00000496043 MAXP61244 160 aa12.77□□□□□ -0.37
PTPRF-214ENST00000496043 ARHGEF7Q14155 803 aa12.77□□□□□ -0.37
PTPRF-214ENST00000496043 DPYSL3Q14195 570 aa12.77□□□□□ -0.37
PTPRF-214ENST00000496043 IFI16Q16666 785 aaKnown RBP12.77□□□□□ -0.37
PTPRF-214ENST00000496043 TBC1D25Q3MII6 688 aa12.77□□□□□ -0.37
PTPRF-214ENST00000496043 ANKRD20A8PQ5CZ79 823 aa12.77□□□□□ -0.37
PTPRF-214ENST00000496043 ZFYVE27Q5T4F4 411 aa12.77□□□□□ -0.37
PTPRF-214ENST00000496043 ARMC12Q5T9G4 340 aa12.77□□□□□ -0.37
PTPRF-214ENST00000496043 TIGD7Q6NT04 549 aaPredicted RBP12.77□□□□□ -0.37
PTPRF-214ENST00000496043 RBM44Q6ZP01 1051 aaKnown RBP12.77□□□□□ -0.37
PTPRF-214ENST00000496043 TAF8Q7Z7C8 310 aa12.77□□□□□ -0.37
PTPRF-214ENST00000496043 ARL10Q8N8L6 244 aa12.77□□□□□ -0.37
PTPRF-214ENST00000496043 OR6C4Q8NGE1 309 aa12.77□□□□□ -0.37
PTPRF-214ENST00000496043 PCDH19Q8TAB3 1148 aa12.77□□□□□ -0.37
PTPRF-214ENST00000496043 SNIP1Q8TAD8 396 aaKnown RBP12.77□□□□□ -0.37
PTPRF-214ENST00000496043 OR1E3Q8WZA6 343 aa12.77□□□□□ -0.37
PTPRF-214ENST00000496043 COQ10AQ96MF6 247 aa12.77□□□□□ -0.37
PTPRF-214ENST00000496043 ZNF578Q96N58 590 aaPredicted RBP12.77□□□□□ -0.37
PTPRF-214ENST00000496043 RBM15Q96T37 977 aaKnown RBP eCLIP12.77□□□□□ -0.37
PTPRF-214ENST00000496043 POLR1BQ9H9Y6 1135 aa12.77□□□□□ -0.37
PTPRF-214ENST00000496043 HAUS2Q9NVX0 235 aa12.77□□□□□ -0.37
PTPRF-214ENST00000496043 MOSPD1Q9UJG1 213 aa12.77□□□□□ -0.37
PTPRF-214ENST00000496043 PPIL1Q9Y3C6 166 aa12.77□□□□□ -0.37
PTPRF-214ENST00000496043 FAM208BQ5VWN6 2430 aa12.77□□□□□ -0.37
PTPRF-214ENST00000496043 ADAMTS20P59510 1910 aa12.76□□□□□ -0.37
PTPRF-214ENST00000496043 AKR1B10O60218 316 aa12.76□□□□□ -0.37
PTPRF-214ENST00000496043 HEXIM1O94992 359 aaKnown RBP12.76□□□□□ -0.37
PTPRF-214ENST00000496043 PGLSO95336 258 aa12.76□□□□□ -0.37
PTPRF-214ENST00000496043 MPOP05164 745 aa12.76□□□□□ -0.37
PTPRF-214ENST00000496043 TMEM253P0C7T8 217 aa12.76□□□□□ -0.37
PTPRF-214ENST00000496043 GM2AP17900 193 aa12.76□□□□□ -0.37
PTPRF-214ENST00000496043 GARSP41250 739 aaKnown RBP12.76□□□□□ -0.37
PTPRF-214ENST00000496043 GABREP78334 506 aa12.76□□□□□ -0.37
PTPRF-214ENST00000496043 GALNT2Q10471 571 aa12.76□□□□□ -0.37
PTPRF-214ENST00000496043 TRAF2Q12933 501 aa12.76□□□□□ -0.37
PTPRF-214ENST00000496043 TCEA2Q15560 299 aa12.76□□□□□ -0.37
PTPRF-214ENST00000496043 CNGA3Q16281 694 aa12.76□□□□□ -0.37
PTPRF-214ENST00000496043 ASTE1Q2TB18 679 aaPredicted RBP12.76□□□□□ -0.37
PTPRF-214ENST00000496043 DENND2CQ68D51 928 aa12.76□□□□□ -0.37
PTPRF-214ENST00000496043 NCBP2-AS2Q69YL0 99 aa12.76□□□□□ -0.37
PTPRF-214ENST00000496043 OGFOD3Q6PK18 319 aa12.76□□□□□ -0.37
PTPRF-214ENST00000496043 CRTC1Q6UUV9 634 aa12.76□□□□□ -0.37
PTPRF-214ENST00000496043 USP45Q70EL2 814 aa12.76□□□□□ -0.37
PTPRF-214ENST00000496043 PIH1D2Q8WWB5 315 aa12.76□□□□□ -0.37
PTPRF-214ENST00000496043 FATE1Q969F0 183 aa12.76□□□□□ -0.37
PTPRF-214ENST00000496043 NUS1Q96E22 293 aa12.76□□□□□ -0.37
PTPRF-214ENST00000496043 TSGA13Q96PP4 275 aa12.76□□□□□ -0.37
PTPRF-214ENST00000496043 DNAJC7Q99615 494 aa12.76□□□□□ -0.37
PTPRF-214ENST00000496043 SEMA3CQ99985 751 aa12.76□□□□□ -0.37
PTPRF-214ENST00000496043 CCDC3Q9BQI4 270 aa12.76□□□□□ -0.37
PTPRF-214ENST00000496043 ZNF670Q9BS34 389 aa12.76□□□□□ -0.37
PTPRF-214ENST00000496043 LGR4Q9BXB1 951 aa12.76□□□□□ -0.37
PTPRF-214ENST00000496043 PACSIN1Q9BY11 444 aa12.76□□□□□ -0.37
PTPRF-214ENST00000496043 POLR1EQ9GZS1 481 aaKnown RBP12.76□□□□□ -0.37
PTPRF-214ENST00000496043 WDR26Q9H7D7 661 aa12.76□□□□□ -0.37
PTPRF-214ENST00000496043 PHPT1Q9NRX4 125 aaPredicted RBP12.76□□□□□ -0.37
PTPRF-214ENST00000496043 RBM22Q9NW64 420 aaKnown RBP eCLIP12.76□□□□□ -0.37
PTPRF-214ENST00000496043 SIRPGQ9P1W8 387 aa12.76□□□□□ -0.37
PTPRF-214ENST00000496043 AMACRQ9UHK6 382 aa12.76□□□□□ -0.37
PTPRF-214ENST00000496043 RAI2Q9Y5P3 530 aa12.76□□□□□ -0.37
PTPRF-214ENST00000496043 ANKRD11Q6UB99 2663 aaPredicted RBP12.76□□□□□ -0.37
PTPRF-214ENST00000496043 CFAP47Q6ZTR5 3102 aa12.76□□□□□ -0.37
PTPRF-214ENST00000496043 PSMD11O00231 422 aa12.75□□□□□ -0.37
PTPRF-214ENST00000496043 DXOO77932 396 aaKnown RBP12.75□□□□□ -0.37
PTPRF-214ENST00000496043 MX2P20592 715 aa12.75□□□□□ -0.37
PTPRF-214ENST00000496043 KDELR1P24390 212 aa12.75□□□□□ -0.37
PTPRF-214ENST00000496043 ITPKBP27987 946 aa12.75□□□□□ -0.37
PTPRF-214ENST00000496043 RBMS1P29558 406 aaKnown RBP12.75□□□□□ -0.37
PTPRF-214ENST00000496043 TAS2R40P59535 323 aa12.75□□□□□ -0.37
PTPRF-214ENST00000496043 ERVPABLB-1P60509 514 aa12.75□□□□□ -0.37
PTPRF-214ENST00000496043 SPIDRQ14159 915 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms