RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, human

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-233	ENST00000496030	CCDC15	Q0P6D6	951 aa		11.96	□□□□□ -0.49
APTX-233	ENST00000496030	RALGDS	Q12967	914 aa		11.96	□□□□□ -0.49
APTX-233	ENST00000496030	TMEM52B	Q4KMG9	183 aa		11.96	□□□□□ -0.49
APTX-233	ENST00000496030	TBC1D3G	Q6DHY5	549 aa		11.96	□□□□□ -0.49
APTX-233	ENST00000496030	TBC1D3C	Q6IPX1	549 aa		11.96	□□□□□ -0.49
APTX-233	ENST00000496030	NEK5	Q6P3R8	708 aa		11.96	□□□□□ -0.49
APTX-233	ENST00000496030	ARMCX6	Q7L4S7	300 aa		11.96	□□□□□ -0.49
APTX-233	ENST00000496030	PIP4P1	Q86T03	277 aa		11.96	□□□□□ -0.49
APTX-233	ENST00000496030	PRUNE1	Q86TP1	453 aa		11.96	□□□□□ -0.49
APTX-233	ENST00000496030	TRIM69	Q86WT6	500 aa		11.96	□□□□□ -0.49
APTX-233	ENST00000496030	TBC1D3	Q8IZP1	549 aa	Predicted RBP	11.96	□□□□□ -0.49
APTX-233	ENST00000496030	HSPA12B	Q96MM6	686 aa		11.96	□□□□□ -0.49
APTX-233	ENST00000496030	MCCC1	Q96RQ3	725 aa	Predicted RBP	11.96	□□□□□ -0.49
APTX-233	ENST00000496030	MLPH	Q9BV36	600 aa	Predicted RBP	11.96	□□□□□ -0.49
APTX-233	ENST00000496030	GBA3	Q9H227	469 aa		11.96	□□□□□ -0.49
APTX-233	ENST00000496030	PREB	Q9HCU5	417 aa		11.96	□□□□□ -0.49
APTX-233	ENST00000496030	TMEM74B	Q9NUR3	256 aa		11.96	□□□□□ -0.49
APTX-233	ENST00000496030	UBP1	Q9NZI7	540 aa		11.96	□□□□□ -0.49
APTX-233	ENST00000496030	ZNF148	Q9UQR1	794 aa		11.96	□□□□□ -0.49
APTX-233	ENST00000496030	CHKB	Q9Y259	395 aa		11.96	□□□□□ -0.49
APTX-233	ENST00000496030	SAR1B	Q9Y6B6	198 aa		11.96	□□□□□ -0.49
APTX-233	ENST00000496030	CFAP46	Q8IYW2	2715 aa		11.95	□□□□□ -0.5
APTX-233	ENST00000496030	LOC285095	A0A1B0GVY8	99 aa		11.95	□□□□□ -0.5
APTX-233	ENST00000496030		A0A1W2PQ67	120 aa		11.95	□□□□□ -0.5
APTX-233	ENST00000496030		A0A1W2PQU0	124 aa		11.95	□□□□□ -0.5
APTX-233	ENST00000496030	CFAP69	A5D8W1	941 aa		11.95	□□□□□ -0.5
APTX-233	ENST00000496030		F5H423	210 aa	Predicted RBP	11.95	□□□□□ -0.5
APTX-233	ENST00000496030	WNT9A	O14904	365 aa		11.95	□□□□□ -0.5
APTX-233	ENST00000496030	TSPAN6	O43657	245 aa		11.95	□□□□□ -0.5
APTX-233	ENST00000496030	OPHN1	O60890	802 aa		11.95	□□□□□ -0.5
APTX-233	ENST00000496030	RNGTT	O60942	597 aa	Known RBP	11.95	□□□□□ -0.5
APTX-233	ENST00000496030	PMPCB	O75439	489 aa		11.95	□□□□□ -0.5
APTX-233	ENST00000496030	ZNF189	O75820	626 aa	Predicted RBP	11.95	□□□□□ -0.5
APTX-233	ENST00000496030	NEBL	O76041	1014 aa		11.95	□□□□□ -0.5
APTX-233	ENST00000496030	CP	P00450	1065 aa		11.95	□□□□□ -0.5
APTX-233	ENST00000496030	GM2A	P17900	193 aa		11.95	□□□□□ -0.5
APTX-233	ENST00000496030	MAOB	P27338	520 aa		11.95	□□□□□ -0.5
APTX-233	ENST00000496030	PSMB4	P28070	264 aa		11.95	□□□□□ -0.5
APTX-233	ENST00000496030	ADRA1A	P35348	466 aa		11.95	□□□□□ -0.5
APTX-233	ENST00000496030	MMP12	P39900	470 aa		11.95	□□□□□ -0.5
APTX-233	ENST00000496030	DHPS	P49366	369 aa	Predicted RBP	11.95	□□□□□ -0.5
APTX-233	ENST00000496030	WNT3A	P56704	352 aa		11.95	□□□□□ -0.5
APTX-233	ENST00000496030	POLR2L	P62875	67 aa	Known RBP	11.95	□□□□□ -0.5
APTX-233	ENST00000496030	FGL2	Q14314	439 aa		11.95	□□□□□ -0.5
APTX-233	ENST00000496030	CDKN3	Q16667	212 aa		11.95	□□□□□ -0.5
APTX-233	ENST00000496030	QPCT	Q16769	361 aa		11.95	□□□□□ -0.5
APTX-233	ENST00000496030	KCTD19	Q17RG1	926 aa	Predicted RBP	11.95	□□□□□ -0.5
APTX-233	ENST00000496030	ZNF284	Q2VY69	593 aa		11.95	□□□□□ -0.5
APTX-233	ENST00000496030	ARMC12	Q5T9G4	340 aa		11.95	□□□□□ -0.5
APTX-233	ENST00000496030	PEAR1	Q5VY43	1037 aa	Predicted RBP	11.95	□□□□□ -0.5
APTX-233	ENST00000496030	SEL1L3	Q68CR1	1132 aa		11.95	□□□□□ -0.5
APTX-233	ENST00000496030	CYP2U1	Q7Z449	544 aa		11.95	□□□□□ -0.5
APTX-233	ENST00000496030	HORMAD1	Q86X24	394 aa		11.95	□□□□□ -0.5
APTX-233	ENST00000496030	HNRNPLL	Q8WVV9	542 aa	Known RBP	11.95	□□□□□ -0.5
APTX-233	ENST00000496030	FOXJ1	Q92949	421 aa		11.95	□□□□□ -0.5
APTX-233	ENST00000496030	TRIM44	Q96DX7	344 aa	Predicted RBP	11.95	□□□□□ -0.5
APTX-233	ENST00000496030	SCRN2	Q96FV2	425 aa		11.95	□□□□□ -0.5
APTX-233	ENST00000496030	MRGPRX2	Q96LB1	330 aa		11.95	□□□□□ -0.5
APTX-233	ENST00000496030	C1QTNF2	Q9BXJ5	285 aa		11.95	□□□□□ -0.5
APTX-233	ENST00000496030	PCDH9	Q9HC56	1237 aa		11.95	□□□□□ -0.5
APTX-233	ENST00000496030	HOMER3	Q9NSC5	361 aa		11.95	□□□□□ -0.5
APTX-233	ENST00000496030	HAUS2	Q9NVX0	235 aa		11.95	□□□□□ -0.5
APTX-233	ENST00000496030	PILRB	Q9UKJ0	227 aa		11.95	□□□□□ -0.5
APTX-233	ENST00000496030	PHTF1	Q9UMS5	762 aa		11.95	□□□□□ -0.5
APTX-233	ENST00000496030	NEU2	Q9Y3R4	380 aa		11.95	□□□□□ -0.5
APTX-233	ENST00000496030	PLXNA2	O75051	1894 aa		11.94	□□□□□ -0.5
APTX-233	ENST00000496030		A0A0J9YYE9	177 aa		11.94	□□□□□ -0.5
APTX-233	ENST00000496030		A0A0U1RQS6	177 aa		11.94	□□□□□ -0.5
APTX-233	ENST00000496030	IGLON5	A6NGN9	336 aa		11.94	□□□□□ -0.5
APTX-233	ENST00000496030	NPIPB15	A6NHN6	443 aa	Predicted RBP	11.94	□□□□□ -0.5
APTX-233	ENST00000496030	MMP20	O60882	483 aa		11.94	□□□□□ -0.5
APTX-233	ENST00000496030	STK10	O94804	968 aa	Known RBP	11.94	□□□□□ -0.5
APTX-233	ENST00000496030	FSBP	O95073	299 aa		11.94	□□□□□ -0.5
APTX-233	ENST00000496030	PCDH8	O95206	1070 aa		11.94	□□□□□ -0.5
APTX-233	ENST00000496030	EPO	P01588	193 aa		11.94	□□□□□ -0.5
APTX-233	ENST00000496030	TRBC1	P01850	177 aa		11.94	□□□□□ -0.5
APTX-233	ENST00000496030	ATXN1L	P0C7T5	689 aa	Known RBP	11.94	□□□□□ -0.5
APTX-233	ENST00000496030	ZSCAN5DP	P0CG00	497 aa		11.94	□□□□□ -0.5
APTX-233	ENST00000496030	CASQ1	P31415	396 aa		11.94	□□□□□ -0.5
APTX-233	ENST00000496030	RPL22	P35268	128 aa	Known RBP	11.94	□□□□□ -0.5
APTX-233	ENST00000496030	HNF1B	P35680	557 aa		11.94	□□□□□ -0.5
APTX-233	ENST00000496030	RPL26	P61254	145 aa	Known RBP	11.94	□□□□□ -0.5
APTX-233	ENST00000496030	CDK18	Q07002	472 aa		11.94	□□□□□ -0.5
APTX-233	ENST00000496030	PARP6	Q2NL67	630 aa		11.94	□□□□□ -0.5
APTX-233	ENST00000496030	P3H1	Q32P28	736 aa		11.94	□□□□□ -0.5
APTX-233	ENST00000496030	LYSMD4	Q5XG99	296 aa		11.94	□□□□□ -0.5
APTX-233	ENST00000496030	KCTD11	Q693B1	232 aa		11.94	□□□□□ -0.5
APTX-233	ENST00000496030	ITPRIPL1	Q6GPH6	555 aa		11.94	□□□□□ -0.5
APTX-233	ENST00000496030	RANBP10	Q6VN20	620 aa		11.94	□□□□□ -0.5
APTX-233	ENST00000496030	DPPA4	Q7L190	304 aa		11.94	□□□□□ -0.5
APTX-233	ENST00000496030	KDELC2	Q7Z4H8	507 aa		11.94	□□□□□ -0.5
APTX-233	ENST00000496030	RAB44	Q7Z6P3	723 aa	Predicted RBP	11.94	□□□□□ -0.5
APTX-233	ENST00000496030	PDCD6IP	Q8WUM4	868 aa	Known RBP	11.94	□□□□□ -0.5
APTX-233	ENST00000496030	PIGK	Q92643	395 aa		11.94	□□□□□ -0.5
APTX-233	ENST00000496030	MAGOHB	Q96A72	148 aa	Known RBP	11.94	□□□□□ -0.5
APTX-233	ENST00000496030	FEM1C	Q96JP0	617 aa		11.94	□□□□□ -0.5
APTX-233	ENST00000496030	CAPZA3	Q96KX2	299 aa		11.94	□□□□□ -0.5
APTX-233	ENST00000496030	C16orf45	Q96MC5	204 aa	Predicted RBP	11.94	□□□□□ -0.5
APTX-233	ENST00000496030	NAP1L3	Q99457	506 aa	Predicted RBP	11.94	□□□□□ -0.5
APTX-233	ENST00000496030	FERMT1	Q9BQL6	677 aa		11.94	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 51 ms