RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 C1orf232A0A0U1RR37 186 aa19.52■□□□□ 0.72
ATG3-208ENST00000495756 SDR42E2A6NKP2 422 aa19.52■□□□□ 0.72
ATG3-208ENST00000495756 AURKAO14965 403 aa19.52■□□□□ 0.72
ATG3-208ENST00000495756 AXIN1O15169 862 aa19.52■□□□□ 0.72
ATG3-208ENST00000495756 TSPAN6O43657 245 aa19.52■□□□□ 0.72
ATG3-208ENST00000495756 TNFRSF8P28908 595 aa19.52■□□□□ 0.72
ATG3-208ENST00000495756 OXTRP30559 389 aa19.52■□□□□ 0.72
ATG3-208ENST00000495756 CRADDP78560 199 aa19.52■□□□□ 0.72
ATG3-208ENST00000495756 DMWDQ09019 674 aa19.52■□□□□ 0.72
ATG3-208ENST00000495756 NAA30Q147X3 362 aaPredicted RBP19.52■□□□□ 0.72
ATG3-208ENST00000495756 TMEM52BQ4KMG9 183 aa19.52■□□□□ 0.72
ATG3-208ENST00000495756 LYSMD3Q7Z3D4 306 aa19.52■□□□□ 0.72
ATG3-208ENST00000495756 AGGF1Q8N302 714 aaeCLIP19.52■□□□□ 0.72
ATG3-208ENST00000495756 EIF1ADQ8N9N8 165 aaKnown RBP19.52■□□□□ 0.72
ATG3-208ENST00000495756 BTBD1Q9H0C5 482 aa19.52■□□□□ 0.72
ATG3-208ENST00000495756 SYBUQ9NX95 663 aa19.52■□□□□ 0.72
ATG3-208ENST00000495756 MTRF1LQ9UGC7 380 aaKnown RBP19.52■□□□□ 0.72
ATG3-208ENST00000495756 MYLKQ15746 1914 aa19.51■□□□□ 0.71
ATG3-208ENST00000495756 CCDC163A0A0D9SF12 145 aa19.51■□□□□ 0.71
ATG3-208ENST00000495756 GPR37L1O60883 481 aa19.51■□□□□ 0.71
ATG3-208ENST00000495756 ACSL1P33121 698 aa19.51■□□□□ 0.71
ATG3-208ENST00000495756 DHX9Q08211 1270 aaKnown RBP19.51■□□□□ 0.71
ATG3-208ENST00000495756 CBLBQ13191 982 aa19.51■□□□□ 0.71
ATG3-208ENST00000495756 MAP7D1Q3KQU3 841 aa19.51■□□□□ 0.71
ATG3-208ENST00000495756 BBS9Q3SYG4 887 aa19.51■□□□□ 0.71
ATG3-208ENST00000495756 CCDC38Q502W7 563 aa19.51■□□□□ 0.71
ATG3-208ENST00000495756 DNAJC21Q5F1R6 531 aaKnown RBP19.51■□□□□ 0.71
ATG3-208ENST00000495756 LRRC66Q68CR7 880 aa19.51■□□□□ 0.71
ATG3-208ENST00000495756 GLT6D1Q7Z4J2 308 aa19.51■□□□□ 0.71
ATG3-208ENST00000495756 MPP5Q8N3R9 675 aa19.51■□□□□ 0.71
ATG3-208ENST00000495756 TTC30BQ8N4P2 665 aa19.51■□□□□ 0.71
ATG3-208ENST00000495756 RLN3Q8WXF3 142 aa19.51■□□□□ 0.71
ATG3-208ENST00000495756 SIGLEC10Q96LC7 697 aa19.51■□□□□ 0.71
ATG3-208ENST00000495756 RANBP9Q96S59 729 aa19.51■□□□□ 0.71
ATG3-208ENST00000495756 FMO2Q99518 471 aa19.51■□□□□ 0.71
ATG3-208ENST00000495756 WRAP53Q9BUR4 548 aaKnown RBP19.51■□□□□ 0.71
ATG3-208ENST00000495756 GPR63Q9BZJ6 419 aa19.51■□□□□ 0.71
ATG3-208ENST00000495756 KDM4CQ9H3R0 1056 aa19.51■□□□□ 0.71
ATG3-208ENST00000495756 ZFYVE1Q9HBF4 777 aa19.51■□□□□ 0.71
ATG3-208ENST00000495756 SGK2Q9HBY8 427 aa19.51■□□□□ 0.71
ATG3-208ENST00000495756 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.51■□□□□ 0.71
ATG3-208ENST00000495756 BPTFQ12830 3046 aa19.5■□□□□ 0.71
ATG3-208ENST00000495756 PRR33A8MZF0 331 aa19.5■□□□□ 0.71
ATG3-208ENST00000495756 E7ESA3 106 aa19.5■□□□□ 0.71
ATG3-208ENST00000495756 H0Y858 1186 aa19.5■□□□□ 0.71
ATG3-208ENST00000495756 LDB2O43679 373 aa19.5■□□□□ 0.71
ATG3-208ENST00000495756 BANF1O75531 89 aa19.5■□□□□ 0.71
ATG3-208ENST00000495756 CLDN7O95471 211 aa19.5■□□□□ 0.71
ATG3-208ENST00000495756 CRTAMO95727 393 aa19.5■□□□□ 0.71
ATG3-208ENST00000495756 ZNF30P17039 623 aa19.5■□□□□ 0.71
ATG3-208ENST00000495756 ADRA1DP25100 572 aa19.5■□□□□ 0.71
ATG3-208ENST00000495756 LIG3P49916 1009 aa19.5■□□□□ 0.71
ATG3-208ENST00000495756 PTSQ03393 145 aa19.5■□□□□ 0.71
ATG3-208ENST00000495756 CSTF1Q05048 431 aaKnown RBP19.5■□□□□ 0.71
ATG3-208ENST00000495756 SEPT6Q14141 434 aa19.5■□□□□ 0.71
ATG3-208ENST00000495756 ARHGEF7Q14155 803 aa19.5■□□□□ 0.71
ATG3-208ENST00000495756 TAF1AQ15573 450 aaPredicted RBP19.5■□□□□ 0.71
ATG3-208ENST00000495756 CNGA3Q16281 694 aa19.5■□□□□ 0.71
ATG3-208ENST00000495756 PCID2Q5JVF3 399 aa19.5■□□□□ 0.71
ATG3-208ENST00000495756 WDR93Q6P2C0 686 aa19.5■□□□□ 0.71
ATG3-208ENST00000495756 CENPUQ71F23 418 aa19.5■□□□□ 0.71
ATG3-208ENST00000495756 EID2BQ96D98 161 aa19.5■□□□□ 0.71
ATG3-208ENST00000495756 TOE1Q96GM8 510 aaKnown RBP19.5■□□□□ 0.71
ATG3-208ENST00000495756 PHACTR1Q9C0D0 580 aa19.5■□□□□ 0.71
ATG3-208ENST00000495756 PREBQ9HCU5 417 aa19.5■□□□□ 0.71
ATG3-208ENST00000495756 FBXO4Q9UKT5 387 aa19.5■□□□□ 0.71
ATG3-208ENST00000495756 ARL5AQ9Y689 179 aa19.5■□□□□ 0.71
ATG3-208ENST00000495756 KMT2EQ8IZD2 1858 aa19.5■□□□□ 0.71
ATG3-208ENST00000495756 IGHV1OR15-9A0A0B4J2B8 117 aa19.49■□□□□ 0.71
ATG3-208ENST00000495756 HEATR9A2RTY3 570 aa19.49■□□□□ 0.71
ATG3-208ENST00000495756 MROH6A6NGR9 719 aa19.49■□□□□ 0.71
ATG3-208ENST00000495756 C2orf81A6NN90 581 aa19.49■□□□□ 0.71
ATG3-208ENST00000495756 EIF3HO15372 352 aaKnown RBP eCLIP19.49■□□□□ 0.71
ATG3-208ENST00000495756 PCDH8O95206 1070 aa19.49■□□□□ 0.71
ATG3-208ENST00000495756 SLC4A1P02730 911 aa19.49■□□□□ 0.71
ATG3-208ENST00000495756 ELFN1P0C7U0 828 aa19.49■□□□□ 0.71
ATG3-208ENST00000495756 CD6P30203 668 aa19.49■□□□□ 0.71
ATG3-208ENST00000495756 HMGCLP35914 325 aa19.49■□□□□ 0.71
ATG3-208ENST00000495756 VSNL1P62760 191 aa19.49■□□□□ 0.71
ATG3-208ENST00000495756 PDIA2Q13087 525 aaKnown RBP19.49■□□□□ 0.71
ATG3-208ENST00000495756 LAMB3Q13751 1172 aa19.49■□□□□ 0.71
ATG3-208ENST00000495756 ARMC3Q5W041 872 aa19.49■□□□□ 0.71
ATG3-208ENST00000495756 CASC4Q6P4E1 433 aa19.49■□□□□ 0.71
ATG3-208ENST00000495756 LIPIQ6XZB0 460 aa19.49■□□□□ 0.71
ATG3-208ENST00000495756 CCNI2Q6ZMN8 369 aaPredicted RBP19.49■□□□□ 0.71
ATG3-208ENST00000495756 TMC3Q7Z5M5 1100 aa19.49■□□□□ 0.71
ATG3-208ENST00000495756 CCDC25Q86WR0 208 aa19.49■□□□□ 0.71
ATG3-208ENST00000495756 CBARPQ8N350 705 aaPredicted RBP19.49■□□□□ 0.71
ATG3-208ENST00000495756 FAM160A2Q8N612 972 aaPredicted RBP19.49■□□□□ 0.71
ATG3-208ENST00000495756 FRMD1Q8N878 549 aa19.49■□□□□ 0.71
ATG3-208ENST00000495756 PPHLN1Q8NEY8 458 aaKnown RBP19.49■□□□□ 0.71
ATG3-208ENST00000495756 OR2T34Q8NGX1 318 aa19.49■□□□□ 0.71
ATG3-208ENST00000495756 CXorf40AQ8TE69 158 aa19.49■□□□□ 0.71
ATG3-208ENST00000495756 PARD6BQ9BYG5 372 aa19.49■□□□□ 0.71
ATG3-208ENST00000495756 WSB2Q9NYS7 404 aaPredicted RBP19.49■□□□□ 0.71
ATG3-208ENST00000495756 TCAF1Q9Y4C2 921 aa19.49■□□□□ 0.71
ATG3-208ENST00000495756 TBC1D3DA0A087WVF3 549 aa19.48■□□□□ 0.71
ATG3-208ENST00000495756 TBC1D3IA0A087WXS9 549 aa19.48■□□□□ 0.71
ATG3-208ENST00000495756 TBC1D3EA0A087X179 549 aa19.48■□□□□ 0.71
ATG3-208ENST00000495756 TBC1D3KA0A087X1G2 549 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms