RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 TBL1YQ9BQ87 522 aa17.15■□□□□ 0.34
HDAC6-235ENST00000495515 DDX47Q9H0S4 455 aaKnown RBP17.15■□□□□ 0.34
HDAC6-235ENST00000495515 ARRDC1-AS1Q9H2J1 176 aa17.15■□□□□ 0.34
HDAC6-235ENST00000495515 ETNK1Q9HBU6 452 aa17.15■□□□□ 0.34
HDAC6-235ENST00000495515 MAGEE1Q9HCI5 957 aa17.15■□□□□ 0.34
HDAC6-235ENST00000495515 HACD3Q9P035 362 aa17.15■□□□□ 0.34
HDAC6-235ENST00000495515 EML5Q05BV3 1969 aa17.15■□□□□ 0.34
HDAC6-235ENST00000495515 A8MX80 341 aa17.14■□□□□ 0.33
HDAC6-235ENST00000495515 PDE2AO00408 941 aaPredicted RBP17.14■□□□□ 0.33
HDAC6-235ENST00000495515 BCAT2O15382 392 aaPredicted RBP17.14■□□□□ 0.33
HDAC6-235ENST00000495515 LRP3O75074 770 aa17.14■□□□□ 0.33
HDAC6-235ENST00000495515 AP2A1O95782 977 aa17.14■□□□□ 0.33
HDAC6-235ENST00000495515 PAK4O96013 591 aaPredicted RBP17.14■□□□□ 0.33
HDAC6-235ENST00000495515 AGTP01019 485 aa17.14■□□□□ 0.33
HDAC6-235ENST00000495515 ZSCAN5DPP0CG00 497 aa17.14■□□□□ 0.33
HDAC6-235ENST00000495515 MPLP40238 635 aa17.14■□□□□ 0.33
HDAC6-235ENST00000495515 BASP1P80723 227 aaKnown RBP17.14■□□□□ 0.33
HDAC6-235ENST00000495515 SEMG2Q02383 582 aa17.14■□□□□ 0.33
HDAC6-235ENST00000495515 SEMA5AQ13591 1074 aa17.14■□□□□ 0.33
HDAC6-235ENST00000495515 STAT4Q14765 748 aa17.14■□□□□ 0.33
HDAC6-235ENST00000495515 ACOX1Q15067 660 aa17.14■□□□□ 0.33
HDAC6-235ENST00000495515 TEAD4Q15561 434 aa17.14■□□□□ 0.33
HDAC6-235ENST00000495515 CNGA3Q16281 694 aa17.14■□□□□ 0.33
HDAC6-235ENST00000495515 DUOXA1Q1HG43 343 aa17.14■□□□□ 0.33
HDAC6-235ENST00000495515 SIRPB2Q5JXA9 342 aa17.14■□□□□ 0.33
HDAC6-235ENST00000495515 FAXCQ5TGI0 409 aa17.14■□□□□ 0.33
HDAC6-235ENST00000495515 PEAR1Q5VY43 1037 aaPredicted RBP17.14■□□□□ 0.33
HDAC6-235ENST00000495515 LRRC66Q68CR7 880 aa17.14■□□□□ 0.33
HDAC6-235ENST00000495515 CRTC1Q6UUV9 634 aa17.14■□□□□ 0.33
HDAC6-235ENST00000495515 RANBP10Q6VN20 620 aa17.14■□□□□ 0.33
HDAC6-235ENST00000495515 SYDE1Q6ZW31 735 aaPredicted RBP17.14■□□□□ 0.33
HDAC6-235ENST00000495515 KLHL7Q8IXQ5 586 aa17.14■□□□□ 0.33
HDAC6-235ENST00000495515 ZCCHC9Q8N567 271 aaKnown RBP17.14■□□□□ 0.33
HDAC6-235ENST00000495515 TAB3Q8N5C8 712 aaPredicted RBP17.14■□□□□ 0.33
HDAC6-235ENST00000495515 SLC25A41Q8N5S1 370 aa17.14■□□□□ 0.33
HDAC6-235ENST00000495515 PDCD7Q8N8D1 485 aaKnown RBP17.14■□□□□ 0.33
HDAC6-235ENST00000495515 GLIS1Q8NBF1 620 aa17.14■□□□□ 0.33
HDAC6-235ENST00000495515 FAM174AQ8TBP5 190 aa17.14■□□□□ 0.33
HDAC6-235ENST00000495515 KLK6Q92876 244 aa17.14■□□□□ 0.33
HDAC6-235ENST00000495515 SLCO2A1Q92959 643 aa17.14■□□□□ 0.33
HDAC6-235ENST00000495515 LENG8Q96PV6 779 aaPredicted RBP17.14■□□□□ 0.33
HDAC6-235ENST00000495515 HINFPQ9BQA5 517 aa17.14■□□□□ 0.33
HDAC6-235ENST00000495515 GORASP1Q9BQQ3 440 aa17.14■□□□□ 0.33
HDAC6-235ENST00000495515 TRABDQ9H4I3 376 aa17.14■□□□□ 0.33
HDAC6-235ENST00000495515 AASDHPPTQ9NRN7 309 aa17.14■□□□□ 0.33
HDAC6-235ENST00000495515 PCYOX1Q9UHG3 505 aa17.14■□□□□ 0.33
HDAC6-235ENST00000495515 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.13■□□□□ 0.33
HDAC6-235ENST00000495515 C1orf232A0A0U1RR37 186 aa17.13■□□□□ 0.33
HDAC6-235ENST00000495515 ATXN1LP0C7T5 689 aaKnown RBP17.13■□□□□ 0.33
HDAC6-235ENST00000495515 LHCGRP22888 699 aa17.13■□□□□ 0.33
HDAC6-235ENST00000495515 ADRA1AP35348 466 aa17.13■□□□□ 0.33
HDAC6-235ENST00000495515 AFF3P51826 1226 aaKnown RBP17.13■□□□□ 0.33
HDAC6-235ENST00000495515 GPS1Q13098 491 aa17.13■□□□□ 0.33
HDAC6-235ENST00000495515 AGERQ15109 404 aa17.13■□□□□ 0.33
HDAC6-235ENST00000495515 WHAMMP3Q1A5X7 153 aa17.13■□□□□ 0.33
HDAC6-235ENST00000495515 KCTD11Q693B1 232 aa17.13■□□□□ 0.33
HDAC6-235ENST00000495515 PRUNE1Q86TP1 453 aa17.13■□□□□ 0.33
HDAC6-235ENST00000495515 SPATA4Q8NEY3 305 aa17.13■□□□□ 0.33
HDAC6-235ENST00000495515 GPR63Q9BZJ6 419 aa17.13■□□□□ 0.33
HDAC6-235ENST00000495515 ZFYVE1Q9HBF4 777 aa17.13■□□□□ 0.33
HDAC6-235ENST00000495515 EIF2B3Q9NR50 452 aaKnown RBP17.13■□□□□ 0.33
HDAC6-235ENST00000495515 HS3ST3A1Q9Y663 406 aa17.13■□□□□ 0.33
HDAC6-235ENST00000495515 ATXN2Q99700 1313 aaKnown RBP17.13■□□□□ 0.33
HDAC6-235ENST00000495515 NUMA1Q14980 2115 aa17.12■□□□□ 0.33
HDAC6-235ENST00000495515 ABCA7Q8IZY2 2146 aa17.12■□□□□ 0.33
HDAC6-235ENST00000495515 FPGTO14772 594 aa17.12■□□□□ 0.33
HDAC6-235ENST00000495515 WNT9AO14904 365 aa17.12■□□□□ 0.33
HDAC6-235ENST00000495515 FOXD2O60548 495 aaPredicted RBP17.12■□□□□ 0.33
HDAC6-235ENST00000495515 MAGEC1O60732 1142 aa17.12■□□□□ 0.33
HDAC6-235ENST00000495515 RECQL5O94762 991 aaPredicted RBP17.12■□□□□ 0.33
HDAC6-235ENST00000495515 APRTP07741 180 aa17.12■□□□□ 0.33
HDAC6-235ENST00000495515 CHRNA4P43681 627 aa17.12■□□□□ 0.33
HDAC6-235ENST00000495515 VPS41P49754 854 aa17.12■□□□□ 0.33
HDAC6-235ENST00000495515 CDK16Q00536 496 aa17.12■□□□□ 0.33
HDAC6-235ENST00000495515 DR1Q01658 176 aa17.12■□□□□ 0.33
HDAC6-235ENST00000495515 OVGP1Q12889 678 aa17.12■□□□□ 0.33
HDAC6-235ENST00000495515 DHX34Q14147 1143 aaKnown RBP17.12■□□□□ 0.33
HDAC6-235ENST00000495515 LRRC14Q15048 493 aa17.12■□□□□ 0.33
HDAC6-235ENST00000495515 TRIP13Q15645 432 aaPredicted RBP17.12■□□□□ 0.33
HDAC6-235ENST00000495515 DENND2CQ68D51 928 aa17.12■□□□□ 0.33
HDAC6-235ENST00000495515 PPP1R21Q6ZMI0 780 aa17.12■□□□□ 0.33
HDAC6-235ENST00000495515 TSPAN33Q86UF1 283 aa17.12■□□□□ 0.33
HDAC6-235ENST00000495515 C1orf216Q8TAB5 229 aa17.12■□□□□ 0.33
HDAC6-235ENST00000495515 APOL2Q9BQE5 337 aa17.12■□□□□ 0.33
HDAC6-235ENST00000495515 ORAI3Q9BRQ5 295 aa17.12■□□□□ 0.33
HDAC6-235ENST00000495515 EBF2Q9HAK2 575 aa17.12■□□□□ 0.33
HDAC6-235ENST00000495515 ARNT2Q9HBZ2 717 aa17.12■□□□□ 0.33
HDAC6-235ENST00000495515 TM9SF3Q9HD45 589 aa17.12■□□□□ 0.33
HDAC6-235ENST00000495515 RAD18Q9NS91 495 aa17.12■□□□□ 0.33
HDAC6-235ENST00000495515 TMEM74BQ9NUR3 256 aa17.12■□□□□ 0.33
HDAC6-235ENST00000495515 PKD2L2Q9NZM6 624 aa17.12■□□□□ 0.33
HDAC6-235ENST00000495515 ZNF711Q9Y462 761 aa17.12■□□□□ 0.33
HDAC6-235ENST00000495515 RGSL1A5PLK6 1076 aa17.11■□□□□ 0.33
HDAC6-235ENST00000495515 AP3B1O00203 1094 aa17.11■□□□□ 0.33
HDAC6-235ENST00000495515 KHNYNO15037 678 aaKnown RBP17.11■□□□□ 0.33
HDAC6-235ENST00000495515 SUN1O94901 812 aa17.11■□□□□ 0.33
HDAC6-235ENST00000495515 CLDN7O95471 211 aa17.11■□□□□ 0.33
HDAC6-235ENST00000495515 CFIP05156 583 aa17.11■□□□□ 0.33
HDAC6-235ENST00000495515 CD38P28907 300 aa17.11■□□□□ 0.33
HDAC6-235ENST00000495515 STC1P52823 247 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms