RNA–Protein interactions for RNA: ENST00000495293.5

RBM39-240, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 759 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-240ENST00000495293 ROR1Q01973 937 aa4.73□□□□□ -1.65
RBM39-240ENST00000495293 MYL5Q02045 173 aa4.73□□□□□ -1.65
RBM39-240ENST00000495293 LRRC63Q05C16 580 aa4.73□□□□□ -1.65
RBM39-240ENST00000495293 GPS2Q13227 327 aa4.73□□□□□ -1.65
RBM39-240ENST00000495293 GPR17Q13304 367 aa4.73□□□□□ -1.65
RBM39-240ENST00000495293 VEPH1Q14D04 833 aa4.73□□□□□ -1.65
RBM39-240ENST00000495293 MAPRE1Q15691 268 aaKnown RBP4.73□□□□□ -1.65
RBM39-240ENST00000495293 NFIL3Q16649 462 aa4.73□□□□□ -1.65
RBM39-240ENST00000495293 SGSM1Q2NKQ1 1148 aa4.73□□□□□ -1.65
RBM39-240ENST00000495293 EDRF1Q3B7T1 1238 aa4.73□□□□□ -1.65
RBM39-240ENST00000495293 TMEM95Q3KNT9 176 aa4.73□□□□□ -1.65
RBM39-240ENST00000495293 CCDC40Q4G0X9 1142 aa4.73□□□□□ -1.65
RBM39-240ENST00000495293 ZNF667Q5HYK9 610 aa4.73□□□□□ -1.65
RBM39-240ENST00000495293 CYP4A22Q5TCH4 519 aa4.73□□□□□ -1.65
RBM39-240ENST00000495293 LMBRD2Q68DH5 695 aaPredicted RBP4.73□□□□□ -1.65
RBM39-240ENST00000495293 ISM2Q6H9L7 571 aa4.73□□□□□ -1.65
RBM39-240ENST00000495293 SLC8B1Q6J4K2 584 aa4.73□□□□□ -1.65
RBM39-240ENST00000495293 KLHL10Q6JEL2 608 aa4.73□□□□□ -1.65
RBM39-240ENST00000495293 CD300LGQ6UXG3 332 aa4.73□□□□□ -1.65
RBM39-240ENST00000495293 TRAPPC11Q7Z392 1133 aa4.73□□□□□ -1.65
RBM39-240ENST00000495293 ITIH5Q86UX2 942 aa4.73□□□□□ -1.65
RBM39-240ENST00000495293 CREBRFQ8IUR6 639 aa4.73□□□□□ -1.65
RBM39-240ENST00000495293 EFCAB13Q8IY85 973 aa4.73□□□□□ -1.65
RBM39-240ENST00000495293 FAM186BQ8IYM0 893 aa4.73□□□□□ -1.65
RBM39-240ENST00000495293 TRIML1Q8N9V2 468 aa4.73□□□□□ -1.65
RBM39-240ENST00000495293 TDRD5Q8NAT2 981 aaKnown RBP4.73□□□□□ -1.65
RBM39-240ENST00000495293 SLC35G2Q8TBE7 412 aa4.73□□□□□ -1.65
RBM39-240ENST00000495293 SPATA18Q8TC71 538 aa4.73□□□□□ -1.65
RBM39-240ENST00000495293 PARD3BQ8TEW8 1205 aa4.73□□□□□ -1.65
RBM39-240ENST00000495293 C2orf15Q8WU43 125 aaKnown RBP4.73□□□□□ -1.65
RBM39-240ENST00000495293 TMEM174Q8WUU8 243 aa4.73□□□□□ -1.65
RBM39-240ENST00000495293 RNF31Q96EP0 1072 aa4.73□□□□□ -1.65
RBM39-240ENST00000495293 MARS2Q96GW9 593 aaKnown RBP4.73□□□□□ -1.65
RBM39-240ENST00000495293 ACBD6Q9BR61 282 aa4.73□□□□□ -1.65
RBM39-240ENST00000495293 S1PR5Q9H228 398 aa4.73□□□□□ -1.65
RBM39-240ENST00000495293 SNX25Q9H3E2 840 aa4.73□□□□□ -1.65
RBM39-240ENST00000495293 MANSC1Q9H8J5 431 aa4.73□□□□□ -1.65
RBM39-240ENST00000495293 TRMT1Q9NXH9 659 aaKnown RBP4.73□□□□□ -1.65
RBM39-240ENST00000495293 DDX43Q9NXZ2 648 aaKnown RBP4.73□□□□□ -1.65
RBM39-240ENST00000495293 VSX1Q9NZR4 365 aaPredicted RBP4.73□□□□□ -1.65
RBM39-240ENST00000495293 OGFRQ9NZT2 677 aa4.73□□□□□ -1.65
RBM39-240ENST00000495293 IFNKQ9P0W0 207 aa4.73□□□□□ -1.65
RBM39-240ENST00000495293 AFF4Q9UHB7 1163 aaKnown RBP4.73□□□□□ -1.65
RBM39-240ENST00000495293 FBXW11Q9UKB1 542 aa4.73□□□□□ -1.65
RBM39-240ENST00000495293 TLK1Q9UKI8 766 aa4.73□□□□□ -1.65
RBM39-240ENST00000495293 PHTF1Q9UMS5 762 aa4.73□□□□□ -1.65
RBM39-240ENST00000495293 ZFP37Q9Y6Q3 630 aaPredicted RBP4.73□□□□□ -1.65
RBM39-240ENST00000495293 CDH23Q9H251 3354 aa4.73□□□□□ -1.65
RBM39-240ENST00000495293 ATG2AQ2TAZ0 1938 aa4.72□□□□□ -1.65
RBM39-240ENST00000495293 MTCL1Q9Y4B5 1905 aaKnown RBP4.72□□□□□ -1.65
RBM39-240ENST00000495293 WDR27A2RRH5 827 aa4.72□□□□□ -1.65
RBM39-240ENST00000495293 LRRC14BA6NHZ5 514 aa4.72□□□□□ -1.65
RBM39-240ENST00000495293 CGB1A6NKQ9 187 aa4.72□□□□□ -1.65
RBM39-240ENST00000495293 PPEF2O14830 753 aa4.72□□□□□ -1.65
RBM39-240ENST00000495293 PMM2O15305 246 aa4.72□□□□□ -1.65
RBM39-240ENST00000495293 SLC16A3O15427 465 aaKnown RBP4.72□□□□□ -1.65
RBM39-240ENST00000495293 CCL16O15467 120 aa4.72□□□□□ -1.65
RBM39-240ENST00000495293 RFPL2O75678 378 aa4.72□□□□□ -1.65
RBM39-240ENST00000495293 FGF19O95750 216 aa4.72□□□□□ -1.65
RBM39-240ENST00000495293 GNA14O95837 355 aa4.72□□□□□ -1.65
RBM39-240ENST00000495293 WEE2P0C1S8 567 aa4.72□□□□□ -1.65
RBM39-240ENST00000495293 FAM163BP0C2L3 166 aa4.72□□□□□ -1.65
RBM39-240ENST00000495293 GCSHP23434 173 aa4.72□□□□□ -1.65
RBM39-240ENST00000495293 SP100P23497 879 aaPredicted RBP4.72□□□□□ -1.65
RBM39-240ENST00000495293 CCNE1P24864 410 aa4.72□□□□□ -1.65
RBM39-240ENST00000495293 GTF2H1P32780 548 aa4.72□□□□□ -1.65
RBM39-240ENST00000495293 GNL1P36915 607 aaPredicted RBP4.72□□□□□ -1.65
RBM39-240ENST00000495293 PIK3CAP42336 1068 aa4.72□□□□□ -1.65
RBM39-240ENST00000495293 RPL10AP62906 217 aaKnown RBP4.72□□□□□ -1.65
RBM39-240ENST00000495293 TUBB4BP68371 445 aa4.72□□□□□ -1.65
RBM39-240ENST00000495293 BLOC1S1P78537 153 aa4.72□□□□□ -1.65
RBM39-240ENST00000495293 CBX1P83916 185 aa4.72□□□□□ -1.65
RBM39-240ENST00000495293 ENPEPQ07075 957 aa4.72□□□□□ -1.65
RBM39-240ENST00000495293 LRMPQ12912 555 aa4.72□□□□□ -1.65
RBM39-240ENST00000495293 IQCB1Q15051 598 aa4.72□□□□□ -1.65
RBM39-240ENST00000495293 ZNF699Q32M78 642 aa4.72□□□□□ -1.65
RBM39-240ENST00000495293 UAP1L1Q3KQV9 507 aa4.72□□□□□ -1.65
RBM39-240ENST00000495293 MGAT5BQ3V5L5 792 aa4.72□□□□□ -1.65
RBM39-240ENST00000495293 FLYWCH1Q4VC44 716 aa4.72□□□□□ -1.65
RBM39-240ENST00000495293 PABPC1LQ4VXU2 614 aaKnown RBP4.72□□□□□ -1.65
RBM39-240ENST00000495293 SLC39A12Q504Y0 691 aa4.72□□□□□ -1.65
RBM39-240ENST00000495293 TEX35Q5T0J7 233 aa4.72□□□□□ -1.65
RBM39-240ENST00000495293 WSCD1Q658N2 575 aa4.72□□□□□ -1.65
RBM39-240ENST00000495293 KRT39Q6A163 491 aa4.72□□□□□ -1.65
RBM39-240ENST00000495293 ANKRD40Q6AI12 368 aa4.72□□□□□ -1.65
RBM39-240ENST00000495293 CENPPQ6IPU0 288 aa4.72□□□□□ -1.65
RBM39-240ENST00000495293 C4orf50Q6ZRC1 276 aa4.72□□□□□ -1.65
RBM39-240ENST00000495293 C11orf57Q6ZUT1 292 aaPredicted RBP4.72□□□□□ -1.65
RBM39-240ENST00000495293 ZNF771Q7L3S4 317 aaPredicted RBP4.72□□□□□ -1.65
RBM39-240ENST00000495293 CHST15Q7LFX5 561 aaPredicted RBP4.72□□□□□ -1.65
RBM39-240ENST00000495293 GRASPQ7Z6J2 395 aaPredicted RBP4.72□□□□□ -1.65
RBM39-240ENST00000495293 SPATA2LQ8IUW3 424 aaPredicted RBP4.72□□□□□ -1.65
RBM39-240ENST00000495293 DHX40Q8IX18 779 aaKnown RBP4.72□□□□□ -1.65
RBM39-240ENST00000495293 ADGRF2Q8IZF7 708 aa4.72□□□□□ -1.65
RBM39-240ENST00000495293 ADSSL1Q8N142 457 aa4.72□□□□□ -1.65
RBM39-240ENST00000495293 CCAR2Q8N163 923 aaKnown RBP4.72□□□□□ -1.65
RBM39-240ENST00000495293 TTC39CQ8N584 583 aa4.72□□□□□ -1.65
RBM39-240ENST00000495293 MLKLQ8NB16 471 aa4.72□□□□□ -1.65
RBM39-240ENST00000495293 LEMD2Q8NC56 503 aa4.72□□□□□ -1.65
RBM39-240ENST00000495293 ZNF397Q8NF99 534 aaPredicted RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms