RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 PPP1R10Q96QC0 940 aaKnown RBP13.49□□□□□ -0.25
GPC1-209ENST00000495100 KATNAL1Q9BW62 490 aa13.49□□□□□ -0.25
GPC1-209ENST00000495100 SCHIP1Q9P0W5 487 aaPredicted RBP13.49□□□□□ -0.25
GPC1-209ENST00000495100 PPME1Q9Y570 386 aa13.49□□□□□ -0.25
GPC1-209ENST00000495100 QSER1Q2KHR3 1735 aa13.49□□□□□ -0.25
GPC1-209ENST00000495100 MAP1BP46821 2468 aaKnown RBP13.49□□□□□ -0.25
GPC1-209ENST00000495100 C5orf42Q9H799 3197 aa13.49□□□□□ -0.25
GPC1-209ENST00000495100 LRRC37AA6NMS7 1700 aa13.48□□□□□ -0.25
GPC1-209ENST00000495100 A0A0J9YYE9 177 aa13.48□□□□□ -0.25
GPC1-209ENST00000495100 STX7O15400 261 aaKnown RBP13.48□□□□□ -0.25
GPC1-209ENST00000495100 NIPSNAP2O75323 286 aa13.48□□□□□ -0.25
GPC1-209ENST00000495100 GSNP06396 782 aa13.48□□□□□ -0.25
GPC1-209ENST00000495100 POU4F1Q01851 419 aa13.48□□□□□ -0.25
GPC1-209ENST00000495100 DET1Q7L5Y6 550 aa13.48□□□□□ -0.25
GPC1-209ENST00000495100 GLT6D1Q7Z4J2 308 aa13.48□□□□□ -0.25
GPC1-209ENST00000495100 TMEM135Q86UB9 458 aa13.48□□□□□ -0.25
GPC1-209ENST00000495100 CLDN19Q8N6F1 224 aa13.48□□□□□ -0.25
GPC1-209ENST00000495100 ACTRT2Q8TDY3 377 aa13.48□□□□□ -0.25
GPC1-209ENST00000495100 FIG4Q92562 907 aa13.48□□□□□ -0.25
GPC1-209ENST00000495100 ZNF419Q96HQ0 510 aaPredicted RBP13.48□□□□□ -0.25
GPC1-209ENST00000495100 KLHL32Q96NJ5 620 aa13.48□□□□□ -0.25
GPC1-209ENST00000495100 CINPQ9BW66 212 aaPredicted RBP13.48□□□□□ -0.25
GPC1-209ENST00000495100 ALG2Q9H553 416 aa13.48□□□□□ -0.25
GPC1-209ENST00000495100 ATP13A1Q9HD20 1204 aa13.48□□□□□ -0.25
GPC1-209ENST00000495100 CASS4Q9NQ75 786 aa13.48□□□□□ -0.25
GPC1-209ENST00000495100 ABCC13Q9NSE7 274 aa13.48□□□□□ -0.25
GPC1-209ENST00000495100 EXD2Q9NVH0 621 aa13.48□□□□□ -0.25
GPC1-209ENST00000495100 VPS4AQ9UN37 437 aa13.48□□□□□ -0.25
GPC1-209ENST00000495100 GABRQQ9UN88 632 aa13.48□□□□□ -0.25
GPC1-209ENST00000495100 USP22Q9UPT9 525 aa13.48□□□□□ -0.25
GPC1-209ENST00000495100 A6NHS1 94 aa13.48□□□□□ -0.25
GPC1-209ENST00000495100 PTGES3LE9PB15 166 aa13.48□□□□□ -0.25
GPC1-209ENST00000495100 CDC7O00311 574 aa13.48□□□□□ -0.25
GPC1-209ENST00000495100 GRID2O43424 1007 aa13.48□□□□□ -0.25
GPC1-209ENST00000495100 OR1I1O60431 355 aa13.48□□□□□ -0.25
GPC1-209ENST00000495100 FAM58BPP0C7Q3 252 aa13.48□□□□□ -0.25
GPC1-209ENST00000495100 RGS2P41220 211 aa13.48□□□□□ -0.25
GPC1-209ENST00000495100 APLP1P51693 650 aa13.48□□□□□ -0.25
GPC1-209ENST00000495100 CDKN2DP55273 166 aa13.48□□□□□ -0.25
GPC1-209ENST00000495100 LSM3P62310 102 aaKnown RBP13.48□□□□□ -0.25
GPC1-209ENST00000495100 GRB7Q14451 532 aa13.48□□□□□ -0.25
GPC1-209ENST00000495100 AP5B1Q2VPB7 878 aa13.48□□□□□ -0.25
GPC1-209ENST00000495100 C18orf21Q32NC0 220 aaPredicted RBP13.48□□□□□ -0.25
GPC1-209ENST00000495100 DCLRE1AQ6PJP8 1040 aa13.48□□□□□ -0.25
GPC1-209ENST00000495100 PAQR3Q6TCH7 311 aa13.48□□□□□ -0.25
GPC1-209ENST00000495100 FBXO39Q8N4B4 442 aa13.48□□□□□ -0.25
GPC1-209ENST00000495100 CENPIQ92674 756 aaPredicted RBP13.48□□□□□ -0.25
GPC1-209ENST00000495100 IGSF8Q969P0 613 aa13.48□□□□□ -0.25
GPC1-209ENST00000495100 TMIGD2Q96BF3 282 aa13.48□□□□□ -0.25
GPC1-209ENST00000495100 RTP4Q96DX8 246 aa13.48□□□□□ -0.25
GPC1-209ENST00000495100 NFKBIZQ9BYH8 718 aa13.48□□□□□ -0.25
GPC1-209ENST00000495100 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.48□□□□□ -0.25
GPC1-209ENST00000495100 PNMA8BQ9ULN7 279 aaPredicted RBP13.48□□□□□ -0.25
GPC1-209ENST00000495100 PCDHB9Q9Y5E1 797 aa13.48□□□□□ -0.25
GPC1-209ENST00000495100 MAGEB16A2A368 324 aa13.48□□□□□ -0.25
GPC1-209ENST00000495100 CCDC162PA2VCL2 907 aa13.48□□□□□ -0.25
GPC1-209ENST00000495100 F8W8V4 182 aa13.48□□□□□ -0.25
GPC1-209ENST00000495100 TLR5O60602 858 aa13.48□□□□□ -0.25
GPC1-209ENST00000495100 SNRPB2P08579 225 aaKnown RBP13.48□□□□□ -0.25
GPC1-209ENST00000495100 CNPP09543 421 aaKnown RBP13.48□□□□□ -0.25
GPC1-209ENST00000495100 AKR1A1P14550 325 aa13.48□□□□□ -0.25
GPC1-209ENST00000495100 ATP6V1B2P21281 511 aa13.48□□□□□ -0.25
GPC1-209ENST00000495100 WARSP23381 471 aaKnown RBP13.48□□□□□ -0.25
GPC1-209ENST00000495100 DPP6P42658 865 aa13.48□□□□□ -0.25
GPC1-209ENST00000495100 GDF5P43026 501 aa13.48□□□□□ -0.25
GPC1-209ENST00000495100 GALK1P51570 392 aa13.48□□□□□ -0.25
GPC1-209ENST00000495100 CASP9P55211 416 aa13.48□□□□□ -0.25
GPC1-209ENST00000495100 CDKL1Q00532 357 aa13.48□□□□□ -0.25
GPC1-209ENST00000495100 PAFAH1B3Q15102 231 aaKnown RBP13.48□□□□□ -0.25
GPC1-209ENST00000495100 NR6A1Q15406 480 aa13.48□□□□□ -0.25
GPC1-209ENST00000495100 NADK2Q4G0N4 442 aa13.48□□□□□ -0.25
GPC1-209ENST00000495100 LDLRAP1Q5SW96 308 aa13.48□□□□□ -0.25
GPC1-209ENST00000495100 SPRYD7Q5W111 196 aa13.48□□□□□ -0.25
GPC1-209ENST00000495100 FBXL22Q6P050 247 aa13.48□□□□□ -0.25
GPC1-209ENST00000495100 CBR4Q8N4T8 237 aa13.48□□□□□ -0.25
GPC1-209ENST00000495100 KLHDC9Q8NEP7 349 aa13.48□□□□□ -0.25
GPC1-209ENST00000495100 ULK4Q96C45 1275 aa13.48□□□□□ -0.25
GPC1-209ENST00000495100 GPR21Q99679 349 aa13.48□□□□□ -0.25
GPC1-209ENST00000495100 RTKNQ9BST9 563 aa13.48□□□□□ -0.25
GPC1-209ENST00000495100 DRC3Q9H069 523 aa13.48□□□□□ -0.25
GPC1-209ENST00000495100 DNAJC28Q9NX36 388 aa13.48□□□□□ -0.25
GPC1-209ENST00000495100 PSMD13Q9UNM6 376 aa13.48□□□□□ -0.25
GPC1-209ENST00000495100 LTBP1Q14766 1721 aa13.47□□□□□ -0.25
GPC1-209ENST00000495100 PABPN1LA6NDY0 278 aaKnown RBP13.47□□□□□ -0.25
GPC1-209ENST00000495100 IRAK2O43187 625 aa13.47□□□□□ -0.25
GPC1-209ENST00000495100 CCNT2O60583 730 aaKnown RBP13.47□□□□□ -0.25
GPC1-209ENST00000495100 LRATO95237 230 aa13.47□□□□□ -0.25
GPC1-209ENST00000495100 LAPTM4AQ15012 233 aa13.47□□□□□ -0.25
GPC1-209ENST00000495100 TCEA2Q15560 299 aa13.47□□□□□ -0.25
GPC1-209ENST00000495100 FAM110CQ1W6H9 321 aa13.47□□□□□ -0.25
GPC1-209ENST00000495100 OR52E8Q6IFG1 317 aa13.47□□□□□ -0.25
GPC1-209ENST00000495100 USP50Q70EL3 339 aaPredicted RBP13.47□□□□□ -0.25
GPC1-209ENST00000495100 RP9Q8TA86 221 aaKnown RBP13.47□□□□□ -0.25
GPC1-209ENST00000495100 GDAP2Q9NXN4 497 aa13.47□□□□□ -0.25
GPC1-209ENST00000495100 GALPQ9UBC7 116 aa13.47□□□□□ -0.25
GPC1-209ENST00000495100 SYNCRIPO60506 623 aaKnown RBP13.47□□□□□ -0.25
GPC1-209ENST00000495100 PRDX3P30048 256 aaKnown RBP13.47□□□□□ -0.25
GPC1-209ENST00000495100 MSLNQ13421 630 aaPredicted RBP13.47□□□□□ -0.25
GPC1-209ENST00000495100 TMTC4Q5T4D3 741 aa13.47□□□□□ -0.25
GPC1-209ENST00000495100 MFSD14CQ5VZR4 134 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms