RNA–Protein interactions for RNA: ENST00000494877.5

GABBR1-220, Transcript of gamma-aminobutyric acid type B receptor subunit 1, humanhuman

TSL 5

Gene GABBR1, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABBR1-220ENST00000494877 NET1Q7Z628 596 aaPredicted RBP17.23■□□□□ 0.35
GABBR1-220ENST00000494877 SDCCAG8Q86SQ7 713 aaPredicted RBP17.23■□□□□ 0.35
GABBR1-220ENST00000494877 WBP2Q969T9 261 aa17.23■□□□□ 0.35
GABBR1-220ENST00000494877 NSMCE3Q96MG7 304 aa17.23■□□□□ 0.35
GABBR1-220ENST00000494877 NUF2Q9BZD4 464 aa17.23■□□□□ 0.35
GABBR1-220ENST00000494877 MUC3BQ9H195 1237 aa17.23■□□□□ 0.35
GABBR1-220ENST00000494877 WDR55Q9H6Y2 383 aaPredicted RBP17.23■□□□□ 0.35
GABBR1-220ENST00000494877 NEMP2A6NFY4 417 aa17.22■□□□□ 0.35
GABBR1-220ENST00000494877 MEI4A8MW99 385 aa17.22■□□□□ 0.35
GABBR1-220ENST00000494877 CIB2O75838 187 aa17.22■□□□□ 0.35
GABBR1-220ENST00000494877 URODP06132 367 aa17.22■□□□□ 0.35
GABBR1-220ENST00000494877 RFC2P35250 354 aa17.22■□□□□ 0.35
GABBR1-220ENST00000494877 KLF10Q13118 480 aa17.22■□□□□ 0.35
GABBR1-220ENST00000494877 LSM12Q3MHD2 195 aaKnown RBP17.22■□□□□ 0.35
GABBR1-220ENST00000494877 CXorf57Q6NSI4 855 aaKnown RBP17.22■□□□□ 0.35
GABBR1-220ENST00000494877 ZNF783Q6ZMS7 281 aa17.22■□□□□ 0.35
GABBR1-220ENST00000494877 C16orf59Q7L2K0 433 aa17.22■□□□□ 0.35
GABBR1-220ENST00000494877 KDM1BQ8NB78 822 aa17.22■□□□□ 0.35
GABBR1-220ENST00000494877 RMDN1Q96DB5 314 aa17.22■□□□□ 0.35
GABBR1-220ENST00000494877 CDKN2AIPNLQ96HQ2 116 aa17.22■□□□□ 0.35
GABBR1-220ENST00000494877 EXOC2Q96KP1 924 aa17.22■□□□□ 0.35
GABBR1-220ENST00000494877 SHCBP1LQ9BZQ2 653 aa17.22■□□□□ 0.35
GABBR1-220ENST00000494877 CRISPLD2Q9H0B8 497 aa17.22■□□□□ 0.35
GABBR1-220ENST00000494877 TMEM39AQ9NV64 488 aa17.22■□□□□ 0.35
GABBR1-220ENST00000494877 NLE1Q9NVX2 485 aaPredicted RBP17.22■□□□□ 0.35
GABBR1-220ENST00000494877 CDYLQ9Y232 598 aa17.22■□□□□ 0.35
GABBR1-220ENST00000494877 ATP11BQ9Y2G3 1177 aa17.22■□□□□ 0.35
GABBR1-220ENST00000494877 GOLGA8QA0A0J9YX86 632 aa17.22■□□□□ 0.35
GABBR1-220ENST00000494877 ABHD14A-ACY1A0A1B0GW23 586 aa17.22■□□□□ 0.35
GABBR1-220ENST00000494877 GOLGA8OA6NCC3 632 aa17.22■□□□□ 0.35
GABBR1-220ENST00000494877 A8MT66 165 aa17.22■□□□□ 0.35
GABBR1-220ENST00000494877 GOLGA8NF8WBI6 632 aa17.22■□□□□ 0.35
GABBR1-220ENST00000494877 LATS1O95835 1130 aa17.22■□□□□ 0.35
GABBR1-220ENST00000494877 C1RP00736 705 aa17.22■□□□□ 0.35
GABBR1-220ENST00000494877 MBL2P11226 248 aaPredicted RBP17.22■□□□□ 0.35
GABBR1-220ENST00000494877 FDXRP22570 491 aa17.22■□□□□ 0.35
GABBR1-220ENST00000494877 EPHA3P29320 983 aa17.22■□□□□ 0.35
GABBR1-220ENST00000494877 ZNF140P52738 457 aaPredicted RBP17.22■□□□□ 0.35
GABBR1-220ENST00000494877 EPHB3P54753 998 aa17.22■□□□□ 0.35
GABBR1-220ENST00000494877 C1QTNF8P60827 252 aa17.22■□□□□ 0.35
GABBR1-220ENST00000494877 SLC25A3Q00325 362 aa17.22■□□□□ 0.35
GABBR1-220ENST00000494877 TRMT5Q32P41 509 aaKnown RBP17.22■□□□□ 0.35
GABBR1-220ENST00000494877 C6orf163Q5TEZ5 329 aa17.22■□□□□ 0.35
GABBR1-220ENST00000494877 ZNF549Q6P9A3 640 aa17.22■□□□□ 0.35
GABBR1-220ENST00000494877 TMEM207Q6UWW9 146 aa17.22■□□□□ 0.35
GABBR1-220ENST00000494877 SLC22A9Q8IVM8 553 aa17.22■□□□□ 0.35
GABBR1-220ENST00000494877 TCEAL8Q8IYN2 117 aa17.22■□□□□ 0.35
GABBR1-220ENST00000494877 STMN2Q93045 179 aa17.22■□□□□ 0.35
GABBR1-220ENST00000494877 CCDC28BQ9BUN5 200 aa17.22■□□□□ 0.35
GABBR1-220ENST00000494877 TDRD1Q9BXT4 1180 aaKnown RBP17.22■□□□□ 0.35
GABBR1-220ENST00000494877 SMPD4Q9NXE4 827 aa17.22■□□□□ 0.35
GABBR1-220ENST00000494877 SPG21Q9NZD8 308 aa17.22■□□□□ 0.35
GABBR1-220ENST00000494877 NEMP1O14524 444 aa17.21■□□□□ 0.35
GABBR1-220ENST00000494877 PRLP01236 227 aa17.21■□□□□ 0.35
GABBR1-220ENST00000494877 F11P03951 625 aa17.21■□□□□ 0.35
GABBR1-220ENST00000494877 PMLP29590 882 aa17.21■□□□□ 0.35
GABBR1-220ENST00000494877 STC1P52823 247 aa17.21■□□□□ 0.35
GABBR1-220ENST00000494877 TAF1AQ15573 450 aaPredicted RBP17.21■□□□□ 0.35
GABBR1-220ENST00000494877 GPR158Q5T848 1215 aa17.21■□□□□ 0.35
GABBR1-220ENST00000494877 TMEM150AQ86TG1 271 aa17.21■□□□□ 0.35
GABBR1-220ENST00000494877 DDX53Q86TM3 631 aaKnown RBP17.21■□□□□ 0.35
GABBR1-220ENST00000494877 CLPTM1LQ96KA5 538 aa17.21■□□□□ 0.35
GABBR1-220ENST00000494877 ANKRD27Q96NW4 1050 aa17.21■□□□□ 0.35
GABBR1-220ENST00000494877 RC3H2Q9HBD1 1191 aaKnown RBP17.21■□□□□ 0.35
GABBR1-220ENST00000494877 SLC7A8Q9UHI5 535 aa17.21■□□□□ 0.35
GABBR1-220ENST00000494877 MCM8Q9UJA3 840 aa17.21■□□□□ 0.35
GABBR1-220ENST00000494877 SPO11Q9Y5K1 396 aa17.21■□□□□ 0.35
GABBR1-220ENST00000494877 A0A088AWK7 358 aa17.21■□□□□ 0.34
GABBR1-220ENST00000494877 LOC100653049A0A140TA62 436 aa17.21■□□□□ 0.34
GABBR1-220ENST00000494877 KRT34O76011 436 aa17.21■□□□□ 0.34
GABBR1-220ENST00000494877 PSMG1O95456 288 aa17.21■□□□□ 0.34
GABBR1-220ENST00000494877 COX4I1P13073 169 aa17.21■□□□□ 0.34
GABBR1-220ENST00000494877 LAG3P18627 525 aa17.21■□□□□ 0.34
GABBR1-220ENST00000494877 KCNA5P22460 613 aa17.21■□□□□ 0.34
GABBR1-220ENST00000494877 SMAD3P84022 425 aaKnown RBP17.21■□□□□ 0.34
GABBR1-220ENST00000494877 ARF5P84085 180 aa17.21■□□□□ 0.34
GABBR1-220ENST00000494877 SEMA3AQ14563 771 aa17.21■□□□□ 0.34
GABBR1-220ENST00000494877 RCN1Q15293 331 aa17.21■□□□□ 0.34
GABBR1-220ENST00000494877 TYSND1Q2T9J0 566 aa17.21■□□□□ 0.34
GABBR1-220ENST00000494877 FAM117BQ6P1L5 589 aa17.21■□□□□ 0.34
GABBR1-220ENST00000494877 FBXO46Q6PJ61 603 aaPredicted RBP17.21■□□□□ 0.34
GABBR1-220ENST00000494877 ISCA2Q86U28 154 aa17.21■□□□□ 0.34
GABBR1-220ENST00000494877 PIM3Q86V86 326 aa17.21■□□□□ 0.34
GABBR1-220ENST00000494877 ZFRQ96KR1 1074 aaKnown RBP17.21■□□□□ 0.34
GABBR1-220ENST00000494877 POPDC3Q9HBV1 291 aa17.21■□□□□ 0.34
GABBR1-220ENST00000494877 EML4Q9HC35 981 aaKnown RBP17.21■□□□□ 0.34
GABBR1-220ENST00000494877 INTS10Q9NVR2 710 aaKnown RBP17.21■□□□□ 0.34
GABBR1-220ENST00000494877 C2orf81A6NN90 581 aa17.2■□□□□ 0.34
GABBR1-220ENST00000494877 SLC22A2O15244 555 aa17.2■□□□□ 0.34
GABBR1-220ENST00000494877 KRT36O76013 467 aa17.2■□□□□ 0.34
GABBR1-220ENST00000494877 PENKP01210 267 aaPredicted RBP17.2■□□□□ 0.34
GABBR1-220ENST00000494877 SLC4A1P02730 911 aa17.2■□□□□ 0.34
GABBR1-220ENST00000494877 PSMA3P25788 255 aa17.2■□□□□ 0.34
GABBR1-220ENST00000494877 PTDSS1P48651 473 aaKnown RBP17.2■□□□□ 0.34
GABBR1-220ENST00000494877 SUOXP51687 545 aa17.2■□□□□ 0.34
GABBR1-220ENST00000494877 GLT6D1Q7Z4J2 308 aa17.2■□□□□ 0.34
GABBR1-220ENST00000494877 TMCO2Q7Z6W1 182 aaPredicted RBP17.2■□□□□ 0.34
GABBR1-220ENST00000494877 SPNS2Q8IVW8 549 aa17.2■□□□□ 0.34
GABBR1-220ENST00000494877 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.2■□□□□ 0.348e-7■■■■■ 184.2
GABBR1-220ENST00000494877 CPSF7Q8N684 471 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms