RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 C6orf132Q5T0Z8 1188 aa9.63□□□□□ -0.87
MSH5-218ENST00000494646 FAM182AQ5T1J6 154 aa9.63□□□□□ -0.87
MSH5-218ENST00000494646 ESRP1Q6NXG1 681 aaKnown RBP9.63□□□□□ -0.87
MSH5-218ENST00000494646 FOXR1Q6PIV2 292 aa9.63□□□□□ -0.87
MSH5-218ENST00000494646 DPPA4Q7L190 304 aa9.63□□□□□ -0.87
MSH5-218ENST00000494646 BBS5Q8N3I7 341 aa9.63□□□□□ -0.87
MSH5-218ENST00000494646 ATPAF2Q8N5M1 289 aa9.63□□□□□ -0.87
MSH5-218ENST00000494646 NIPA2Q8N8Q9 360 aa9.63□□□□□ -0.87
MSH5-218ENST00000494646 KCTD6Q8NC69 237 aa9.63□□□□□ -0.87
MSH5-218ENST00000494646 PCDH19Q8TAB3 1148 aa9.63□□□□□ -0.87
MSH5-218ENST00000494646 TEKT4Q8WW24 435 aa9.63□□□□□ -0.87
MSH5-218ENST00000494646 SCG3Q8WXD2 468 aaKnown RBP9.63□□□□□ -0.87
MSH5-218ENST00000494646 FGF11Q92914 225 aa9.63□□□□□ -0.87
MSH5-218ENST00000494646 WDR92Q96MX6 357 aa9.63□□□□□ -0.87
MSH5-218ENST00000494646 DEPDC7Q96QD5 511 aa9.63□□□□□ -0.87
MSH5-218ENST00000494646 SMIM14Q96QK8 99 aa9.63□□□□□ -0.87
MSH5-218ENST00000494646 NUDCD1Q96RS6 583 aa9.63□□□□□ -0.87
MSH5-218ENST00000494646 CCDC3Q9BQI4 270 aa9.63□□□□□ -0.87
MSH5-218ENST00000494646 LGR4Q9BXB1 951 aa9.63□□□□□ -0.87
MSH5-218ENST00000494646 SUDS3Q9H7L9 328 aaPredicted RBP9.63□□□□□ -0.87
MSH5-218ENST00000494646 SYNDIG1Q9H7V2 258 aa9.63□□□□□ -0.87
MSH5-218ENST00000494646 USP29Q9HBJ7 922 aa9.63□□□□□ -0.87
MSH5-218ENST00000494646 KLQ9UEF7 1012 aa9.63□□□□□ -0.87
MSH5-218ENST00000494646 PADI4Q9UM07 663 aa9.63□□□□□ -0.87
MSH5-218ENST00000494646 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.63□□□□□ -0.873e-13■□□□□ 10
MSH5-218ENST00000494646 RAI2Q9Y5P3 530 aa9.63□□□□□ -0.87
MSH5-218ENST00000494646 COL27A1Q8IZC6 1860 aaPredicted RBP9.63□□□□□ -0.87
MSH5-218ENST00000494646 A0A087WV48 116 aa9.62□□□□□ -0.87
MSH5-218ENST00000494646 GOLGA6CA6NDK9 693 aa9.62□□□□□ -0.87
MSH5-218ENST00000494646 GOLGA6BA6NDN3 693 aa9.62□□□□□ -0.87
MSH5-218ENST00000494646 AGRPO00253 132 aa9.62□□□□□ -0.87
MSH5-218ENST00000494646 CACNB4O00305 520 aaPredicted RBP9.62□□□□□ -0.87
MSH5-218ENST00000494646 GPR37O15354 613 aa9.62□□□□□ -0.87
MSH5-218ENST00000494646 HTRA2O43464 458 aaPredicted RBP9.62□□□□□ -0.87
MSH5-218ENST00000494646 CPP00450 1065 aa9.62□□□□□ -0.87
MSH5-218ENST00000494646 PDHA1P08559 390 aa9.62□□□□□ -0.87
MSH5-218ENST00000494646 H2AFZP0C0S5 128 aa9.62□□□□□ -0.87
MSH5-218ENST00000494646 GOLGA6DP0CG33 693 aa9.62□□□□□ -0.87
MSH5-218ENST00000494646 SERPINB6P35237 376 aa9.62□□□□□ -0.87
MSH5-218ENST00000494646 ACTN2P35609 894 aa9.62□□□□□ -0.87
MSH5-218ENST00000494646 MMP13P45452 471 aa9.62□□□□□ -0.87
MSH5-218ENST00000494646 ABCG1P45844 678 aa9.62□□□□□ -0.87
MSH5-218ENST00000494646 RPIAP49247 311 aa9.62□□□□□ -0.87
MSH5-218ENST00000494646 ARSEP51690 589 aa9.62□□□□□ -0.87
MSH5-218ENST00000494646 TAS2R40P59535 323 aa9.62□□□□□ -0.87
MSH5-218ENST00000494646 GABREP78334 506 aa9.62□□□□□ -0.87
MSH5-218ENST00000494646 TRAF2Q12933 501 aa9.62□□□□□ -0.87
MSH5-218ENST00000494646 MTM1Q13496 603 aa9.62□□□□□ -0.87
MSH5-218ENST00000494646 DPYSL3Q14195 570 aa9.62□□□□□ -0.87
MSH5-218ENST00000494646 MESDQ14696 234 aa9.62□□□□□ -0.87
MSH5-218ENST00000494646 CNGA3Q16281 694 aa9.62□□□□□ -0.87
MSH5-218ENST00000494646 ISXQ2M1V0 245 aa9.62□□□□□ -0.87
MSH5-218ENST00000494646 ANKRD20A8PQ5CZ79 823 aa9.62□□□□□ -0.87
MSH5-218ENST00000494646 ZFYVE27Q5T4F4 411 aa9.62□□□□□ -0.87
MSH5-218ENST00000494646 PNCKQ6P2M8 343 aa9.62□□□□□ -0.87
MSH5-218ENST00000494646 H2AFVQ71UI9 128 aa9.62□□□□□ -0.87
MSH5-218ENST00000494646 HSD11B1LQ7Z5J1 315 aa9.62□□□□□ -0.87
MSH5-218ENST00000494646 TAF8Q7Z7C8 310 aa9.62□□□□□ -0.87
MSH5-218ENST00000494646 GKN2Q86XP6 184 aa9.62□□□□□ -0.87
MSH5-218ENST00000494646 SFTPA2Q8IWL1 248 aa9.62□□□□□ -0.87
MSH5-218ENST00000494646 FSTL5Q8N475 847 aaPredicted RBP9.62□□□□□ -0.87
MSH5-218ENST00000494646 RNF214Q8ND24 703 aa9.62□□□□□ -0.87
MSH5-218ENST00000494646 CCL4L1Q8NHW4 92 aa9.62□□□□□ -0.87
MSH5-218ENST00000494646 OR1E3Q8WZA6 343 aa9.62□□□□□ -0.87
MSH5-218ENST00000494646 IQCDQ96DY2 449 aa9.62□□□□□ -0.87
MSH5-218ENST00000494646 PDXPQ96GD0 296 aa9.62□□□□□ -0.87
MSH5-218ENST00000494646 ATXN7L3BQ96GX2 97 aa9.62□□□□□ -0.87
MSH5-218ENST00000494646 CHP1Q99653 195 aa9.62□□□□□ -0.87
MSH5-218ENST00000494646 SEMA3CQ99985 751 aa9.62□□□□□ -0.87
MSH5-218ENST00000494646 TMEM168Q9H0V1 697 aa9.62□□□□□ -0.87
MSH5-218ENST00000494646 DEF6Q9H4E7 631 aa9.62□□□□□ -0.87
MSH5-218ENST00000494646 CYP4F12Q9HCS2 524 aa9.62□□□□□ -0.87
MSH5-218ENST00000494646 GOLGA6AQ9NYA3 693 aa9.62□□□□□ -0.87
MSH5-218ENST00000494646 NCKIPSDQ9NZQ3 722 aa9.62□□□□□ -0.87
MSH5-218ENST00000494646 PHTF1Q9UMS5 762 aa9.62□□□□□ -0.87
MSH5-218ENST00000494646 GPR34Q9UPC5 381 aa9.62□□□□□ -0.87
MSH5-218ENST00000494646 MGAQ8IWI9 3026 aa9.61□□□□□ -0.87
MSH5-218ENST00000494646 ZFC3H1O60293 1989 aaKnown RBP9.61□□□□□ -0.87
MSH5-218ENST00000494646 RRP8O43159 456 aaKnown RBP9.61□□□□□ -0.87
MSH5-218ENST00000494646 MFSD11O43934 449 aa9.61□□□□□ -0.87
MSH5-218ENST00000494646 AKR1B10O60218 316 aa9.61□□□□□ -0.87
MSH5-218ENST00000494646 SOCS5O75159 536 aa9.61□□□□□ -0.87
MSH5-218ENST00000494646 PROSCO94903 275 aa9.61□□□□□ -0.87
MSH5-218ENST00000494646 TPM3P06753 285 aa9.61□□□□□ -0.87
MSH5-218ENST00000494646 ALPIP09923 528 aa9.61□□□□□ -0.87
MSH5-218ENST00000494646 PTMSP20962 102 aa9.61□□□□□ -0.87
MSH5-218ENST00000494646 VIPR1P32241 457 aa9.61□□□□□ -0.87
MSH5-218ENST00000494646 HSPA9P38646 679 aaKnown RBP9.61□□□□□ -0.87
MSH5-218ENST00000494646 ETV3P41162 512 aa9.61□□□□□ -0.87
MSH5-218ENST00000494646 CCL7P80098 99 aa9.61□□□□□ -0.87
MSH5-218ENST00000494646 ARHGEF7Q14155 803 aa9.61□□□□□ -0.87
MSH5-218ENST00000494646 IHHQ14623 411 aa9.61□□□□□ -0.87
MSH5-218ENST00000494646 SLC18A3Q16572 532 aa9.61□□□□□ -0.87
MSH5-218ENST00000494646 TSR1Q2NL82 804 aaKnown RBP9.61□□□□□ -0.87
MSH5-218ENST00000494646 SKOR2Q2VWA4 1001 aaPredicted RBP9.61□□□□□ -0.87
MSH5-218ENST00000494646 TBC1D25Q3MII6 688 aa9.61□□□□□ -0.87
MSH5-218ENST00000494646 C3orf38Q5JPI3 329 aa9.61□□□□□ -0.87
MSH5-218ENST00000494646 ARMC12Q5T9G4 340 aa9.61□□□□□ -0.87
MSH5-218ENST00000494646 NCBP2-AS2Q69YL0 99 aa9.61□□□□□ -0.87
MSH5-218ENST00000494646 RFLNAQ6ZTI6 216 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms