RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 A0A087X1B8 175 aa16.57■□□□□ 0.24
ATG4B-225ENST00000494465 GRXCR1A8MXD5 290 aa16.57■□□□□ 0.24
ATG4B-225ENST00000494465 PRAMEF12O95522 483 aa16.57■□□□□ 0.24
ATG4B-225ENST00000494465 PRSS56P0CW18 603 aa16.57■□□□□ 0.24
ATG4B-225ENST00000494465 KITP10721 976 aa16.57■□□□□ 0.24
ATG4B-225ENST00000494465 CDKN2DP55273 166 aa16.57■□□□□ 0.24
ATG4B-225ENST00000494465 CTC1Q2NKJ3 1217 aa16.57■□□□□ 0.24
ATG4B-225ENST00000494465 ZYG11AQ6WRX3 759 aa16.57■□□□□ 0.24
ATG4B-225ENST00000494465 RDH11Q8TC12 318 aa16.57■□□□□ 0.24
ATG4B-225ENST00000494465 PDCD6IPQ8WUM4 868 aaKnown RBP16.57■□□□□ 0.24
ATG4B-225ENST00000494465 PPM1EQ8WY54 764 aa16.57■□□□□ 0.24
ATG4B-225ENST00000494465 TM6SF2Q9BZW4 377 aa16.57■□□□□ 0.24
ATG4B-225ENST00000494465 CATSPERZQ9NTU4 200 aa16.57■□□□□ 0.24
ATG4B-225ENST00000494465 RANBP2P49792 3224 aaKnown RBP16.56■□□□□ 0.24
ATG4B-225ENST00000494465 RB1P06400 928 aa16.56■□□□□ 0.24
ATG4B-225ENST00000494465 BMP1P13497 986 aa16.56■□□□□ 0.24
ATG4B-225ENST00000494465 ABCE1P61221 599 aaKnown RBP16.56■□□□□ 0.24
ATG4B-225ENST00000494465 TIAL1Q01085 375 aaKnown RBP eCLIP16.56■□□□□ 0.244e-6■■□□□ 12.4
ATG4B-225ENST00000494465 TYSND1Q2T9J0 566 aa16.56■□□□□ 0.24
ATG4B-225ENST00000494465 ZNF549Q6P9A3 640 aa16.56■□□□□ 0.24
ATG4B-225ENST00000494465 CLNKQ7Z7G1 428 aa16.56■□□□□ 0.24
ATG4B-225ENST00000494465 TMEM25Q86YD3 366 aa16.56■□□□□ 0.24
ATG4B-225ENST00000494465 VOPP1Q96AW1 172 aa16.56■□□□□ 0.24
ATG4B-225ENST00000494465 ABCB8Q9NUT2 735 aa16.56■□□□□ 0.24
ATG4B-225ENST00000494465 TDP1Q9NUW8 608 aa16.56■□□□□ 0.24
ATG4B-225ENST00000494465 CRYL1Q9Y2S2 319 aa16.56■□□□□ 0.24
ATG4B-225ENST00000494465 VWA7Q9Y334 891 aa16.56■□□□□ 0.24
ATG4B-225ENST00000494465 HCFC2Q9Y5Z7 792 aa16.56■□□□□ 0.24
ATG4B-225ENST00000494465 TRIM13O60858 407 aa16.56■□□□□ 0.24
ATG4B-225ENST00000494465 HNRNPA1P09651 372 aaKnown RBP eCLIP16.56■□□□□ 0.24
ATG4B-225ENST00000494465 OGNP20774 298 aaKnown RBP16.56■□□□□ 0.24
ATG4B-225ENST00000494465 SERPINB3P29508 390 aa16.56■□□□□ 0.24
ATG4B-225ENST00000494465 HLA-FP30511 346 aa16.56■□□□□ 0.24
ATG4B-225ENST00000494465 ABL2P42684 1182 aa16.56■□□□□ 0.24
ATG4B-225ENST00000494465 SLC12A2P55011 1212 aa16.56■□□□□ 0.24
ATG4B-225ENST00000494465 AP1S1P61966 158 aa16.56■□□□□ 0.24
ATG4B-225ENST00000494465 SPDYAQ5MJ70 313 aa16.56■□□□□ 0.24
ATG4B-225ENST00000494465 MRNIPQ6NTE8 343 aa16.56■□□□□ 0.24
ATG4B-225ENST00000494465 TMEM207Q6UWW9 146 aa16.56■□□□□ 0.24
ATG4B-225ENST00000494465 TTC30BQ8N4P2 665 aa16.56■□□□□ 0.24
ATG4B-225ENST00000494465 PIWIL2Q8TC59 973 aaKnown RBP16.56■□□□□ 0.24
ATG4B-225ENST00000494465 HEXDCQ8WVB3 486 aa16.56■□□□□ 0.24
ATG4B-225ENST00000494465 TSNARE1Q96NA8 513 aa16.56■□□□□ 0.24
ATG4B-225ENST00000494465 MTIF3Q9H2K0 278 aaKnown RBP16.56■□□□□ 0.24
ATG4B-225ENST00000494465 XPR1Q9UBH6 696 aa16.56■□□□□ 0.24
ATG4B-225ENST00000494465 DNAJC16Q9Y2G8 782 aa16.56■□□□□ 0.24
ATG4B-225ENST00000494465 MTF2Q9Y483 593 aaPredicted RBP16.56■□□□□ 0.24
ATG4B-225ENST00000494465 PCDHB9Q9Y5E1 797 aa16.56■□□□□ 0.24
ATG4B-225ENST00000494465 A0A0U1RQS6 177 aa16.55■□□□□ 0.24
ATG4B-225ENST00000494465 C2orf81A6NN90 581 aa16.55■□□□□ 0.24
ATG4B-225ENST00000494465 PER2O15055 1255 aa16.55■□□□□ 0.24
ATG4B-225ENST00000494465 UNC5CO95185 931 aa16.55■□□□□ 0.24
ATG4B-225ENST00000494465 PENKP01210 267 aaPredicted RBP16.55■□□□□ 0.24
ATG4B-225ENST00000494465 T-ENOLP0DO92 83 aa16.55■□□□□ 0.24
ATG4B-225ENST00000494465 LPOP22079 712 aaPredicted RBP16.55■□□□□ 0.24
ATG4B-225ENST00000494465 SKIV2L2P42285 1042 aaKnown RBP16.55■□□□□ 0.24
ATG4B-225ENST00000494465 STC1P52823 247 aa16.55■□□□□ 0.24
ATG4B-225ENST00000494465 AQP5P55064 265 aa16.55■□□□□ 0.24
ATG4B-225ENST00000494465 TSNAXIP1Q2TAA8 658 aa16.55■□□□□ 0.24
ATG4B-225ENST00000494465 ZNF697Q5TEC3 545 aa16.55■□□□□ 0.24
ATG4B-225ENST00000494465 ASTLQ6HA08 431 aaPredicted RBP16.55■□□□□ 0.24
ATG4B-225ENST00000494465 CAMK1DQ8IU85 385 aa16.55■□□□□ 0.24
ATG4B-225ENST00000494465 OR6K2Q8NGY2 324 aa16.55■□□□□ 0.24
ATG4B-225ENST00000494465 PRR11Q96HE9 360 aaPredicted RBP16.55■□□□□ 0.24
ATG4B-225ENST00000494465 UBXN10Q96LJ8 280 aa16.55■□□□□ 0.24
ATG4B-225ENST00000494465 ZSWIM3Q96MP5 696 aa16.55■□□□□ 0.24
ATG4B-225ENST00000494465 GATA5Q9BWX5 397 aaPredicted RBP16.55■□□□□ 0.24
ATG4B-225ENST00000494465 UNKQ9C0B0 810 aaKnown RBP16.55■□□□□ 0.24
ATG4B-225ENST00000494465 ZFP69BQ9UJL9 534 aa16.55■□□□□ 0.24
ATG4B-225ENST00000494465 MID2Q9UJV3 735 aa16.55■□□□□ 0.24
ATG4B-225ENST00000494465 CYBBP04839 570 aa16.55■□□□□ 0.24
ATG4B-225ENST00000494465 CTSOP43234 321 aaPredicted RBP16.55■□□□□ 0.24
ATG4B-225ENST00000494465 CSNK1DP48730 415 aa16.55■□□□□ 0.24
ATG4B-225ENST00000494465 ZNF77Q15935 545 aa16.55■□□□□ 0.24
ATG4B-225ENST00000494465 ARHGAP15Q53QZ3 475 aa16.55■□□□□ 0.24
ATG4B-225ENST00000494465 DGKKQ5KSL6 1271 aa16.55■□□□□ 0.24
ATG4B-225ENST00000494465 C9orf50Q5SZB4 431 aa16.55■□□□□ 0.24
ATG4B-225ENST00000494465 ASRGL1Q7L266 308 aa16.55■□□□□ 0.24
ATG4B-225ENST00000494465 GRASPQ7Z6J2 395 aaPredicted RBP16.55■□□□□ 0.24
ATG4B-225ENST00000494465 EFHBQ8N7U6 833 aa16.55■□□□□ 0.24
ATG4B-225ENST00000494465 ANKRD49Q8WVL7 239 aa16.55■□□□□ 0.24
ATG4B-225ENST00000494465 PIH1D2Q8WWB5 315 aa16.55■□□□□ 0.24
ATG4B-225ENST00000494465 ZNF707Q96C28 371 aaPredicted RBP16.55■□□□□ 0.24
ATG4B-225ENST00000494465 TSPAN17Q96FV3 270 aa16.55■□□□□ 0.24
ATG4B-225ENST00000494465 SCYL1Q96KG9 808 aa16.55■□□□□ 0.24
ATG4B-225ENST00000494465 POLR3BQ9NW08 1133 aaPredicted RBP16.55■□□□□ 0.24
ATG4B-225ENST00000494465 EVLQ9UI08 416 aaPredicted RBP16.55■□□□□ 0.24
ATG4B-225ENST00000494465 TRANK1O15050 2925 aa16.54■□□□□ 0.24
ATG4B-225ENST00000494465 SCN8AQ9UQD0 1980 aa16.54■□□□□ 0.24
ATG4B-225ENST00000494465 SOBPA7XYQ1 873 aa16.54■□□□□ 0.24
ATG4B-225ENST00000494465 TRAFD1O14545 582 aaPredicted RBP16.54■□□□□ 0.24
ATG4B-225ENST00000494465 PGLSO95336 258 aa16.54■□□□□ 0.24
ATG4B-225ENST00000494465 CA3P07451 260 aa16.54■□□□□ 0.24
ATG4B-225ENST00000494465 CSHL1Q14406 222 aa16.54■□□□□ 0.24
ATG4B-225ENST00000494465 PITRM1Q5JRX3 1037 aa16.54■□□□□ 0.24
ATG4B-225ENST00000494465 LIPMQ5VYY2 423 aa16.54■□□□□ 0.24
ATG4B-225ENST00000494465 AFTPHQ6ULP2 937 aa16.54■□□□□ 0.24
ATG4B-225ENST00000494465 MAVSQ7Z434 540 aa16.54■□□□□ 0.24
ATG4B-225ENST00000494465 TBC1D1Q86TI0 1168 aaPredicted RBP16.54■□□□□ 0.24
ATG4B-225ENST00000494465 LEMD2Q8NC56 503 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms