RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 CTSEP14091 401 aa9.78□□□□□ -0.84
UFD1-210ENST00000494054 PTMSP20962 102 aa9.78□□□□□ -0.84
UFD1-210ENST00000494054 LHCGRP22888 699 aa9.78□□□□□ -0.84
UFD1-210ENST00000494054 VIPR1P32241 457 aa9.78□□□□□ -0.84
UFD1-210ENST00000494054 SERPINB6P35237 376 aa9.78□□□□□ -0.84
UFD1-210ENST00000494054 TRIM23P36406 574 aa9.78□□□□□ -0.84
UFD1-210ENST00000494054 MMP13P45452 471 aa9.78□□□□□ -0.84
UFD1-210ENST00000494054 RPIAP49247 311 aa9.78□□□□□ -0.84
UFD1-210ENST00000494054 BLKP51451 505 aa9.78□□□□□ -0.84
UFD1-210ENST00000494054 KIAA1024LP59773 190 aa9.78□□□□□ -0.84
UFD1-210ENST00000494054 GALNT2Q10471 571 aa9.78□□□□□ -0.84
UFD1-210ENST00000494054 PAFAH1B3Q15102 231 aaKnown RBP9.78□□□□□ -0.84
UFD1-210ENST00000494054 SLC18A3Q16572 532 aa9.78□□□□□ -0.84
UFD1-210ENST00000494054 HADHQ16836 314 aaKnown RBP9.78□□□□□ -0.84
UFD1-210ENST00000494054 ISXQ2M1V0 245 aa9.78□□□□□ -0.84
UFD1-210ENST00000494054 ANKRD20A8PQ5CZ79 823 aa9.78□□□□□ -0.84
UFD1-210ENST00000494054 NCBP2-AS2Q69YL0 99 aa9.78□□□□□ -0.84
UFD1-210ENST00000494054 PNCKQ6P2M8 343 aa9.78□□□□□ -0.84
UFD1-210ENST00000494054 H2AFVQ71UI9 128 aa9.78□□□□□ -0.84
UFD1-210ENST00000494054 HSD11B1LQ7Z5J1 315 aa9.78□□□□□ -0.84
UFD1-210ENST00000494054 TSPAN33Q86UF1 283 aa9.78□□□□□ -0.84
UFD1-210ENST00000494054 SFTPA2Q8IWL1 248 aa9.78□□□□□ -0.84
UFD1-210ENST00000494054 TEX26Q8N6G2 289 aa9.78□□□□□ -0.84
UFD1-210ENST00000494054 PQLC3Q8N755 202 aa9.78□□□□□ -0.84
UFD1-210ENST00000494054 KYQ8NBH2 561 aa9.78□□□□□ -0.84
UFD1-210ENST00000494054 OR8K1Q8NGG5 319 aa9.78□□□□□ -0.84
UFD1-210ENST00000494054 FGF11Q92914 225 aa9.78□□□□□ -0.84
UFD1-210ENST00000494054 GLMNQ92990 594 aa9.78□□□□□ -0.84
UFD1-210ENST00000494054 DNAJC7Q99615 494 aa9.78□□□□□ -0.84
UFD1-210ENST00000494054 CHP1Q99653 195 aa9.78□□□□□ -0.84
UFD1-210ENST00000494054 NT5MQ9NPB1 228 aa9.78□□□□□ -0.84
UFD1-210ENST00000494054 EVA1BQ9NVM1 165 aa9.78□□□□□ -0.84
UFD1-210ENST00000494054 SIRPGQ9P1W8 387 aa9.78□□□□□ -0.84
UFD1-210ENST00000494054 KLQ9UEF7 1012 aa9.78□□□□□ -0.84
UFD1-210ENST00000494054 RABGEF1Q9UJ41 708 aa9.78□□□□□ -0.84
UFD1-210ENST00000494054 PHTF1Q9UMS5 762 aa9.78□□□□□ -0.84
UFD1-210ENST00000494054 DGKBQ9Y6T7 804 aa9.78□□□□□ -0.84
UFD1-210ENST00000494054 RP1P56715 2156 aa9.78□□□□□ -0.84
UFD1-210ENST00000494054 LRP4O75096 1905 aa9.78□□□□□ -0.84
UFD1-210ENST00000494054 PMS2P1A4D2B8 440 aa9.77□□□□□ -0.85
UFD1-210ENST00000494054 NPIPB15A6NHN6 443 aaPredicted RBP9.77□□□□□ -0.85
UFD1-210ENST00000494054 CACNB4O00305 520 aaPredicted RBP9.77□□□□□ -0.85
UFD1-210ENST00000494054 FZD6O60353 706 aa9.77□□□□□ -0.85
UFD1-210ENST00000494054 TNFP01375 233 aa9.77□□□□□ -0.85
UFD1-210ENST00000494054 FUCA1P04066 466 aa9.77□□□□□ -0.85
UFD1-210ENST00000494054 PDHA1P08559 390 aa9.77□□□□□ -0.85
UFD1-210ENST00000494054 HOXC4P09017 264 aaPredicted RBP9.77□□□□□ -0.85
UFD1-210ENST00000494054 ALPIP09923 528 aa9.77□□□□□ -0.85
UFD1-210ENST00000494054 CTPS1P17812 591 aa9.77□□□□□ -0.85
UFD1-210ENST00000494054 ACTN2P35609 894 aa9.77□□□□□ -0.85
UFD1-210ENST00000494054 ETV3P41162 512 aa9.77□□□□□ -0.85
UFD1-210ENST00000494054 GARSP41250 739 aaKnown RBP9.77□□□□□ -0.85
UFD1-210ENST00000494054 LSSP48449 732 aa9.77□□□□□ -0.85
UFD1-210ENST00000494054 GABREP78334 506 aa9.77□□□□□ -0.85
UFD1-210ENST00000494054 GBE1Q04446 702 aa9.77□□□□□ -0.85
UFD1-210ENST00000494054 ITKQ08881 620 aa9.77□□□□□ -0.85
UFD1-210ENST00000494054 SLC10A2Q12908 348 aaPredicted RBP9.77□□□□□ -0.85
UFD1-210ENST00000494054 ELOCQ15369 112 aa9.77□□□□□ -0.85
UFD1-210ENST00000494054 SKOR2Q2VWA4 1001 aaPredicted RBP9.77□□□□□ -0.85
UFD1-210ENST00000494054 TBC1D25Q3MII6 688 aa9.77□□□□□ -0.85
UFD1-210ENST00000494054 RALGPS1Q5JS13 557 aa9.77□□□□□ -0.85
UFD1-210ENST00000494054 FAM182AQ5T1J6 154 aa9.77□□□□□ -0.85
UFD1-210ENST00000494054 DENND2CQ68D51 928 aa9.77□□□□□ -0.85
UFD1-210ENST00000494054 SPECC1LQ69YQ0 1117 aa9.77□□□□□ -0.85
UFD1-210ENST00000494054 ESRP1Q6NXG1 681 aaKnown RBP9.77□□□□□ -0.85
UFD1-210ENST00000494054 LVRNQ6Q4G3 990 aa9.77□□□□□ -0.85
UFD1-210ENST00000494054 RFLNAQ6ZTI6 216 aa9.77□□□□□ -0.85
UFD1-210ENST00000494054 LRRC49Q8IUZ0 686 aa9.77□□□□□ -0.85
UFD1-210ENST00000494054 VSTM4Q8IW00 320 aa9.77□□□□□ -0.85
UFD1-210ENST00000494054 BBS5Q8N3I7 341 aa9.77□□□□□ -0.85
UFD1-210ENST00000494054 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.77□□□□□ -0.85
UFD1-210ENST00000494054 ARL10Q8N8L6 244 aa9.77□□□□□ -0.85
UFD1-210ENST00000494054 KCTD6Q8NC69 237 aa9.77□□□□□ -0.85
UFD1-210ENST00000494054 OR56A4Q8NGH8 313 aa9.77□□□□□ -0.85
UFD1-210ENST00000494054 CCL4L1Q8NHW4 92 aa9.77□□□□□ -0.85
UFD1-210ENST00000494054 TPCN2Q8NHX9 752 aa9.77□□□□□ -0.85
UFD1-210ENST00000494054 SNIP1Q8TAD8 396 aaKnown RBP9.77□□□□□ -0.85
UFD1-210ENST00000494054 NSMCE1Q8WV22 266 aa9.77□□□□□ -0.85
UFD1-210ENST00000494054 PIH1D2Q8WWB5 315 aa9.77□□□□□ -0.85
UFD1-210ENST00000494054 CTNNBL1Q8WYA6 563 aaPredicted RBP9.77□□□□□ -0.85
UFD1-210ENST00000494054 RAPGEF5Q92565 580 aa9.77□□□□□ -0.85
UFD1-210ENST00000494054 MAML1Q92585 1016 aa9.77□□□□□ -0.85
UFD1-210ENST00000494054 SCRN2Q96FV2 425 aa9.77□□□□□ -0.85
UFD1-210ENST00000494054 ATXN7L3BQ96GX2 97 aa9.77□□□□□ -0.85
UFD1-210ENST00000494054 MCCC1Q96RQ3 725 aaPredicted RBP9.77□□□□□ -0.85
UFD1-210ENST00000494054 RBM15Q96T37 977 aaKnown RBP eCLIP9.77□□□□□ -0.85
UFD1-210ENST00000494054 SEMA3CQ99985 751 aa9.77□□□□□ -0.85
UFD1-210ENST00000494054 CCDC3Q9BQI4 270 aa9.77□□□□□ -0.85
UFD1-210ENST00000494054 ZNF670Q9BS34 389 aa9.77□□□□□ -0.85
UFD1-210ENST00000494054 TMEM168Q9H0V1 697 aa9.77□□□□□ -0.85
UFD1-210ENST00000494054 UVRAGQ9P2Y5 699 aa9.77□□□□□ -0.85
UFD1-210ENST00000494054 GPR34Q9UPC5 381 aa9.77□□□□□ -0.85
UFD1-210ENST00000494054 DOLKQ9UPQ8 538 aa9.77□□□□□ -0.85
UFD1-210ENST00000494054 PPIL1Q9Y3C6 166 aa9.77□□□□□ -0.85
UFD1-210ENST00000494054 ENTPD2Q9Y5L3 495 aa9.77□□□□□ -0.85
UFD1-210ENST00000494054 RAI2Q9Y5P3 530 aa9.77□□□□□ -0.85
UFD1-210ENST00000494054 IGSF10Q6WRI0 2623 aa9.76□□□□□ -0.85
UFD1-210ENST00000494054 SHROOM3Q8TF72 1996 aa9.76□□□□□ -0.85
UFD1-210ENST00000494054 A0A1W2PQ67 120 aa9.76□□□□□ -0.85
UFD1-210ENST00000494054 SSU72P8A0A1W2PR75 194 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms