RNA–Protein interactions for RNA: ENST00000494014.1

EPHA3-203, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 3,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-203ENST00000494014 NIPAL4Q0D2K0 466 aa7.09□□□□□ -1.27
EPHA3-203ENST00000494014 CUL2Q13617 745 aa7.09□□□□□ -1.27
EPHA3-203ENST00000494014 SKIV2LQ15477 1246 aaKnown RBP7.09□□□□□ -1.27
EPHA3-203ENST00000494014 FSCN1Q16658 493 aaKnown RBP7.09□□□□□ -1.27
EPHA3-203ENST00000494014 ZNF181Q2M3W8 571 aa7.09□□□□□ -1.27
EPHA3-203ENST00000494014 BOLA3Q53S33 107 aa7.09□□□□□ -1.27
EPHA3-203ENST00000494014 SMYD5Q6GMV2 418 aa7.09□□□□□ -1.27
EPHA3-203ENST00000494014 XAF1Q6GPH4 301 aa7.09□□□□□ -1.27
EPHA3-203ENST00000494014 LRRC8EQ6NSJ5 796 aa7.09□□□□□ -1.27
EPHA3-203ENST00000494014 FAM45BPQ6NSW5 357 aa7.09□□□□□ -1.27
EPHA3-203ENST00000494014 TLK2Q86UE8 772 aa7.09□□□□□ -1.27
EPHA3-203ENST00000494014 KCTD6Q8NC69 237 aa7.09□□□□□ -1.27
EPHA3-203ENST00000494014 TMEM35BQ8NCS4 154 aa7.09□□□□□ -1.27
EPHA3-203ENST00000494014 OR6Q1Q8NGQ2 317 aa7.09□□□□□ -1.27
EPHA3-203ENST00000494014 FAM45AQ8TCE6 357 aa7.09□□□□□ -1.27
EPHA3-203ENST00000494014 ZFP90Q8TF47 636 aa7.09□□□□□ -1.27
EPHA3-203ENST00000494014 PHF10Q8WUB8 498 aaKnown RBP7.09□□□□□ -1.27
EPHA3-203ENST00000494014 ISL2Q96A47 359 aa7.09□□□□□ -1.27
EPHA3-203ENST00000494014 FBXL20Q96IG2 436 aa7.09□□□□□ -1.27
EPHA3-203ENST00000494014 SLC9A7Q96T83 725 aa7.09□□□□□ -1.27
EPHA3-203ENST00000494014 COL25A1Q9BXS0 654 aaPredicted RBP7.09□□□□□ -1.27
EPHA3-203ENST00000494014 SLA2Q9H6Q3 261 aa7.09□□□□□ -1.27
EPHA3-203ENST00000494014 RUBCNLQ9H714 662 aa7.09□□□□□ -1.27
EPHA3-203ENST00000494014 RAVER2Q9HCJ3 691 aaKnown RBP7.09□□□□□ -1.27
EPHA3-203ENST00000494014 TXNDC16Q9P2K2 825 aa7.09□□□□□ -1.27
EPHA3-203ENST00000494014 WARS2Q9UGM6 360 aaKnown RBP7.09□□□□□ -1.27
EPHA3-203ENST00000494014 ZNF221Q9UK13 617 aa7.09□□□□□ -1.27
EPHA3-203ENST00000494014 MYADML2A6NDP7 307 aa7.09□□□□□ -1.28
EPHA3-203ENST00000494014 FAM25AB3EWG3 89 aa7.09□□□□□ -1.28
EPHA3-203ENST00000494014 FAM25CB3EWG5 89 aa7.09□□□□□ -1.28
EPHA3-203ENST00000494014 FAM25GB3EWG6 89 aa7.09□□□□□ -1.28
EPHA3-203ENST00000494014 MTSS1O43312 755 aa7.09□□□□□ -1.28
EPHA3-203ENST00000494014 DAB1O75553 588 aa7.09□□□□□ -1.28
EPHA3-203ENST00000494014 AMHP03971 560 aa7.09□□□□□ -1.28
EPHA3-203ENST00000494014 CFHP08603 1231 aa7.09□□□□□ -1.28
EPHA3-203ENST00000494014 SMPD1P17405 629 aa7.09□□□□□ -1.28
EPHA3-203ENST00000494014 PSMA4P25789 261 aaKnown RBP7.09□□□□□ -1.28
EPHA3-203ENST00000494014 ARCN1P48444 511 aaKnown RBP7.09□□□□□ -1.28
EPHA3-203ENST00000494014 AQP6Q13520 282 aa7.09□□□□□ -1.28
EPHA3-203ENST00000494014 HIST2H2ACQ16777 129 aaPredicted RBP7.09□□□□□ -1.28
EPHA3-203ENST00000494014 CDONQ4KMG0 1287 aa7.09□□□□□ -1.28
EPHA3-203ENST00000494014 CEP78Q5JTW2 689 aa7.09□□□□□ -1.28
EPHA3-203ENST00000494014 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.09□□□□□ -1.28
EPHA3-203ENST00000494014 NXNQ6DKJ4 435 aa7.09□□□□□ -1.28
EPHA3-203ENST00000494014 TUBA3EQ6PEY2 450 aa7.09□□□□□ -1.28
EPHA3-203ENST00000494014 TMEM270Q6UE05 265 aa7.09□□□□□ -1.28
EPHA3-203ENST00000494014 FBXO11Q86XK2 927 aa7.09□□□□□ -1.28
EPHA3-203ENST00000494014 MAP4K3Q8IVH8 894 aa7.09□□□□□ -1.28
EPHA3-203ENST00000494014 CCDC28AQ8IWP9 274 aa7.09□□□□□ -1.28
EPHA3-203ENST00000494014 GPD1LQ8N335 351 aa7.09□□□□□ -1.28
EPHA3-203ENST00000494014 RDH11Q8TC12 318 aa7.09□□□□□ -1.28
EPHA3-203ENST00000494014 CANT1Q8WVQ1 401 aa7.09□□□□□ -1.28
EPHA3-203ENST00000494014 SPATA17Q96L03 361 aa7.09□□□□□ -1.28
EPHA3-203ENST00000494014 FUNDC2Q9BWH2 189 aa7.09□□□□□ -1.28
EPHA3-203ENST00000494014 TEKT3Q9BXF9 490 aa7.09□□□□□ -1.28
EPHA3-203ENST00000494014 FTHL17Q9BXU8 183 aa7.09□□□□□ -1.28
EPHA3-203ENST00000494014 MTMR12Q9C0I1 747 aa7.09□□□□□ -1.28
EPHA3-203ENST00000494014 NECTIN3Q9NQS3 549 aa7.09□□□□□ -1.28
EPHA3-203ENST00000494014 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.09□□□□□ -1.28
EPHA3-203ENST00000494014 KCNN3Q9UGI6 736 aa7.09□□□□□ -1.28
EPHA3-203ENST00000494014 COPG1Q9Y678 874 aaKnown RBP7.09□□□□□ -1.28
EPHA3-203ENST00000494014 TRIOBPQ9H2D6 2365 aa7.08□□□□□ -1.28
EPHA3-203ENST00000494014 DHRS12A0PJE2 317 aa7.08□□□□□ -1.28
EPHA3-203ENST00000494014 PRORSD1PA6NEY8 169 aa7.08□□□□□ -1.28
EPHA3-203ENST00000494014 TRPC5OSA6NMA1 111 aa7.08□□□□□ -1.28
EPHA3-203ENST00000494014 M0R3G1 203 aa7.08□□□□□ -1.28
EPHA3-203ENST00000494014 PIK3R2O00459 728 aa7.08□□□□□ -1.28
EPHA3-203ENST00000494014 SYNCRIPO60506 623 aaKnown RBP7.08□□□□□ -1.28
EPHA3-203ENST00000494014 LRCH4O75427 683 aa7.08□□□□□ -1.28
EPHA3-203ENST00000494014 CCNKO75909 580 aa7.08□□□□□ -1.28
EPHA3-203ENST00000494014 PGK1P00558 417 aa7.08□□□□□ -1.28
EPHA3-203ENST00000494014 HLA-DRAP01903 254 aa7.08□□□□□ -1.28
EPHA3-203ENST00000494014 CXCL10P02778 98 aa7.08□□□□□ -1.28
EPHA3-203ENST00000494014 MPOP05164 745 aa7.08□□□□□ -1.28
EPHA3-203ENST00000494014 APRTP07741 180 aa7.08□□□□□ -1.28
EPHA3-203ENST00000494014 BMP4P12644 408 aa7.08□□□□□ -1.28
EPHA3-203ENST00000494014 SSTR3P32745 418 aaPredicted RBP7.08□□□□□ -1.28
EPHA3-203ENST00000494014 S100A5P33763 92 aa7.08□□□□□ -1.28
EPHA3-203ENST00000494014 POLR2IP36954 125 aaKnown RBP7.08□□□□□ -1.28
EPHA3-203ENST00000494014 MAGEA12P43365 314 aa7.08□□□□□ -1.28
EPHA3-203ENST00000494014 PTPN9P43378 593 aa7.08□□□□□ -1.28
EPHA3-203ENST00000494014 RPS9P46781 194 aaKnown RBP7.08□□□□□ -1.28
EPHA3-203ENST00000494014 NKX2-5P52952 324 aaPredicted RBP7.08□□□□□ -1.28
EPHA3-203ENST00000494014 ADARB1P78563 741 aaKnown RBP7.08□□□□□ -1.28
EPHA3-203ENST00000494014 PURAQ00577 322 aaKnown RBP7.08□□□□□ -1.28
EPHA3-203ENST00000494014 EIF2B5Q13144 721 aaKnown RBP7.08□□□□□ -1.28
EPHA3-203ENST00000494014 LAMC2Q13753 1193 aa7.08□□□□□ -1.28
EPHA3-203ENST00000494014 CDK10Q15131 360 aa7.08□□□□□ -1.28
EPHA3-203ENST00000494014 CYBRD1Q53TN4 286 aa7.08□□□□□ -1.28
EPHA3-203ENST00000494014 TJAP1Q5JTD0 557 aa7.08□□□□□ -1.28
EPHA3-203ENST00000494014 GLRA4Q5JXX5 417 aa7.08□□□□□ -1.28
EPHA3-203ENST00000494014 ERAP2Q6P179 960 aa7.08□□□□□ -1.28
EPHA3-203ENST00000494014 KCNT2Q6UVM3 1135 aa7.08□□□□□ -1.28
EPHA3-203ENST00000494014 CYP2R1Q6VVX0 501 aa7.08□□□□□ -1.28
EPHA3-203ENST00000494014 Q7L0L9 218 aa7.08□□□□□ -1.28
EPHA3-203ENST00000494014 ZNF598Q86UK7 904 aaKnown RBP7.08□□□□□ -1.28
EPHA3-203ENST00000494014 ELMOD2Q8IZ81 293 aa7.08□□□□□ -1.28
EPHA3-203ENST00000494014 OFCC1Q8IZS5 231 aa7.08□□□□□ -1.28
EPHA3-203ENST00000494014 PCDH20Q8N6Y1 951 aaKnown RBP7.08□□□□□ -1.28
EPHA3-203ENST00000494014 CYP2W1Q8TAV3 490 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms