RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 ADGRE2Q9UHX3 823 aa11.67□□□□□ -0.54
BRCA1-222ENST00000493919 AJAP1Q9UKB5 411 aaPredicted RBP11.67□□□□□ -0.54
BRCA1-222ENST00000493919 FARP1Q9Y4F1 1045 aaPredicted RBP11.67□□□□□ -0.54
BRCA1-222ENST00000493919 SYNDIG1LA6NDD5 238 aa11.66□□□□□ -0.54
BRCA1-222ENST00000493919 ATP6V1G2-DDX39BF2Z307 99 aa11.66□□□□□ -0.54
BRCA1-222ENST00000493919 PIP5K1CO60331 668 aa11.66□□□□□ -0.54
BRCA1-222ENST00000493919 PALMO75781 387 aa11.66□□□□□ -0.54
BRCA1-222ENST00000493919 POU2F2P09086 479 aa11.66□□□□□ -0.54
BRCA1-222ENST00000493919 ATXN8OSP0DMR3 200 aa11.66□□□□□ -0.54
BRCA1-222ENST00000493919 BMP1P13497 986 aa11.66□□□□□ -0.54
BRCA1-222ENST00000493919 ICAM2P13598 275 aa11.66□□□□□ -0.54
BRCA1-222ENST00000493919 ACO1P21399 889 aaKnown RBP11.66□□□□□ -0.54
BRCA1-222ENST00000493919 FSHRP23945 695 aa11.66□□□□□ -0.54
BRCA1-222ENST00000493919 AP2S1P53680 142 aaPredicted RBP11.66□□□□□ -0.54
BRCA1-222ENST00000493919 SGCGQ13326 291 aa11.66□□□□□ -0.54
BRCA1-222ENST00000493919 TBRG1Q3YBR2 411 aa11.66□□□□□ -0.54
BRCA1-222ENST00000493919 PPP1R26Q5T8A7 1209 aaPredicted RBP11.66□□□□□ -0.54
BRCA1-222ENST00000493919 CNSTQ6PJW8 725 aa11.66□□□□□ -0.54
BRCA1-222ENST00000493919 DCDC5Q6ZRR9 648 aa11.66□□□□□ -0.54
BRCA1-222ENST00000493919 SLC9B2Q86UD5 537 aa11.66□□□□□ -0.54
BRCA1-222ENST00000493919 CCDC33Q8N5R6 958 aa11.66□□□□□ -0.54
BRCA1-222ENST00000493919 PCYOX1LQ8NBM8 494 aa11.66□□□□□ -0.54
BRCA1-222ENST00000493919 IL17RDQ8NFM7 739 aa11.66□□□□□ -0.54
BRCA1-222ENST00000493919 ADAMTS19Q8TE59 1207 aa11.66□□□□□ -0.54
BRCA1-222ENST00000493919 CHPT1Q8WUD6 406 aa11.66□□□□□ -0.54
BRCA1-222ENST00000493919 PSMG2Q969U7 264 aa11.66□□□□□ -0.54
BRCA1-222ENST00000493919 VPS33AQ96AX1 596 aa11.66□□□□□ -0.54
BRCA1-222ENST00000493919 KLHL29Q96CT2 875 aa11.66□□□□□ -0.54
BRCA1-222ENST00000493919 NUP85Q9BW27 656 aa11.66□□□□□ -0.54
BRCA1-222ENST00000493919 TMEM168Q9H0V1 697 aa11.66□□□□□ -0.54
BRCA1-222ENST00000493919 OSBPL2Q9H1P3 480 aa11.66□□□□□ -0.54
BRCA1-222ENST00000493919 TFB2MQ9H5Q4 396 aaKnown RBP11.66□□□□□ -0.54
BRCA1-222ENST00000493919 TMEM30AQ9NV96 361 aa11.66□□□□□ -0.54
BRCA1-222ENST00000493919 UCKL1Q9NWZ5 548 aa11.66□□□□□ -0.54
BRCA1-222ENST00000493919 VTI1BQ9UEU0 232 aa11.66□□□□□ -0.54
BRCA1-222ENST00000493919 DNAJC12Q9UKB3 198 aa11.66□□□□□ -0.54
BRCA1-222ENST00000493919 ERVK-19Q9WJR5 959 aa11.66□□□□□ -0.54
BRCA1-222ENST00000493919 TRIOO75962 3097 aa11.66□□□□□ -0.54
BRCA1-222ENST00000493919 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.66□□□□□ -0.54
BRCA1-222ENST00000493919 CCDC78A2IDD5 438 aa11.66□□□□□ -0.54
BRCA1-222ENST00000493919 DBX1A6NMT0 343 aa11.66□□□□□ -0.54
BRCA1-222ENST00000493919 CLOCKO15516 846 aa11.66□□□□□ -0.54
BRCA1-222ENST00000493919 BMP10O95393 424 aa11.66□□□□□ -0.54
BRCA1-222ENST00000493919 CALCAP01258 141 aa11.66□□□□□ -0.54
BRCA1-222ENST00000493919 S100A9P06702 114 aaKnown RBP11.66□□□□□ -0.54
BRCA1-222ENST00000493919 GJA1P17302 382 aa11.66□□□□□ -0.54
BRCA1-222ENST00000493919 HLA-FP30511 346 aa11.66□□□□□ -0.54
BRCA1-222ENST00000493919 SSTR3P32745 418 aaPredicted RBP11.66□□□□□ -0.54
BRCA1-222ENST00000493919 ATP1A2P50993 1020 aa11.66□□□□□ -0.54
BRCA1-222ENST00000493919 GOLGA7BQ2TAP0 167 aa11.66□□□□□ -0.54
BRCA1-222ENST00000493919 TIGD2Q4W5G0 525 aa11.66□□□□□ -0.54
BRCA1-222ENST00000493919 PDPK2PQ6A1A2 396 aa11.66□□□□□ -0.54
BRCA1-222ENST00000493919 PAQR9Q6ZVX9 377 aa11.66□□□□□ -0.54
BRCA1-222ENST00000493919 ENOSF1Q7L5Y1 443 aa11.66□□□□□ -0.54
BRCA1-222ENST00000493919 DNAJB7Q7Z6W7 309 aaPredicted RBP11.66□□□□□ -0.54
BRCA1-222ENST00000493919 GALNT5Q7Z7M9 940 aa11.66□□□□□ -0.54
BRCA1-222ENST00000493919 DNAAF5Q86Y56 855 aa11.66□□□□□ -0.54
BRCA1-222ENST00000493919 CAMK1DQ8IU85 385 aa11.66□□□□□ -0.54
BRCA1-222ENST00000493919 DTX3Q8N9I9 347 aa11.66□□□□□ -0.54
BRCA1-222ENST00000493919 TDRD5Q8NAT2 981 aaKnown RBP11.66□□□□□ -0.54
BRCA1-222ENST00000493919 ITFG1Q8TB96 612 aa11.66□□□□□ -0.54
BRCA1-222ENST00000493919 CAVIN3Q969G5 261 aa11.66□□□□□ -0.54
BRCA1-222ENST00000493919 GCNAQ96QF7 691 aa11.66□□□□□ -0.54
BRCA1-222ENST00000493919 XPO6Q96QU8 1125 aaKnown RBP11.66□□□□□ -0.54
BRCA1-222ENST00000493919 KCNK16Q96T55 309 aa11.66□□□□□ -0.54
BRCA1-222ENST00000493919 DCLRE1BQ9H816 532 aa11.66□□□□□ -0.54
BRCA1-222ENST00000493919 ZNF334Q9HCZ1 680 aaPredicted RBP11.66□□□□□ -0.54
BRCA1-222ENST00000493919 HPF1Q9NWY4 346 aa11.66□□□□□ -0.54
BRCA1-222ENST00000493919 CNOT6Q9ULM6 557 aaKnown RBP11.66□□□□□ -0.54
BRCA1-222ENST00000493919 RPH3AQ9Y2J0 694 aaPredicted RBP11.66□□□□□ -0.54
BRCA1-222ENST00000493919 A0A0U1RQJ8 604 aa11.65□□□□□ -0.54
BRCA1-222ENST00000493919 A0A1W2PRU2 124 aa11.65□□□□□ -0.54
BRCA1-222ENST00000493919 SLC38A8A6NNN8 435 aa11.65□□□□□ -0.54
BRCA1-222ENST00000493919 C16orf96A6NNT2 1141 aa11.65□□□□□ -0.54
BRCA1-222ENST00000493919 C2CD4DB7Z1M9 353 aa11.65□□□□□ -0.54
BRCA1-222ENST00000493919 TEX33O43247 280 aa11.65□□□□□ -0.54
BRCA1-222ENST00000493919 PEX11AO75192 247 aa11.65□□□□□ -0.54
BRCA1-222ENST00000493919 PAPLNO95428 1278 aa11.65□□□□□ -0.54
BRCA1-222ENST00000493919 APOA4P06727 396 aa11.65□□□□□ -0.54
BRCA1-222ENST00000493919 UCHL3P15374 230 aa11.65□□□□□ -0.54
BRCA1-222ENST00000493919 CEBPBP17676 345 aa11.65□□□□□ -0.54
BRCA1-222ENST00000493919 PTX3P26022 381 aaPredicted RBP11.65□□□□□ -0.54
BRCA1-222ENST00000493919 GABRR2P28476 465 aa11.65□□□□□ -0.54
BRCA1-222ENST00000493919 PMLP29590 882 aa11.65□□□□□ -0.54
BRCA1-222ENST00000493919 TYK2P29597 1187 aa11.65□□□□□ -0.54
BRCA1-222ENST00000493919 CCR2P41597 374 aa11.65□□□□□ -0.54
BRCA1-222ENST00000493919 COG7P83436 770 aa11.65□□□□□ -0.54
BRCA1-222ENST00000493919 ZP2Q05996 745 aa11.65□□□□□ -0.54
BRCA1-222ENST00000493919 ASPHQ12797 758 aa11.65□□□□□ -0.54
BRCA1-222ENST00000493919 CBLBQ13191 982 aa11.65□□□□□ -0.54
BRCA1-222ENST00000493919 UGP2Q16851 508 aa11.65□□□□□ -0.54
BRCA1-222ENST00000493919 C5orf22Q49AR2 442 aa11.65□□□□□ -0.54
BRCA1-222ENST00000493919 C6orf163Q5TEZ5 329 aa11.65□□□□□ -0.54
BRCA1-222ENST00000493919 KLHDC7AQ5VTJ3 777 aa11.65□□□□□ -0.54
BRCA1-222ENST00000493919 FAM205BPQ63HN1 556 aa11.65□□□□□ -0.54
BRCA1-222ENST00000493919 RWDD4Q6NW29 188 aaKnown RBP11.65□□□□□ -0.54
BRCA1-222ENST00000493919 DENND5BQ6ZUT9 1274 aa11.65□□□□□ -0.54
BRCA1-222ENST00000493919 GPIHBP1Q8IV16 184 aa11.65□□□□□ -0.54
BRCA1-222ENST00000493919 ADHFE1Q8IWW8 467 aa11.65□□□□□ -0.54
BRCA1-222ENST00000493919 TCAIMQ8N3R3 496 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms