RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 TSPAN16Q9UKR8 245 aa7.88□□□□□ -1.15
BRCA1-221ENST00000493795 SH3D21A4FU49 640 aa7.88□□□□□ -1.15
BRCA1-221ENST00000493795 C5orf51A6NDU8 294 aa7.88□□□□□ -1.15
BRCA1-221ENST00000493795 FGF10O15520 208 aaPredicted RBP7.88□□□□□ -1.15
BRCA1-221ENST00000493795 MPZL2O60487 215 aa7.88□□□□□ -1.15
BRCA1-221ENST00000493795 MICAL2O94851 1124 aa7.88□□□□□ -1.15
BRCA1-221ENST00000493795 VTNP04004 478 aa7.88□□□□□ -1.15
BRCA1-221ENST00000493795 SNRPD1P62314 119 aaKnown RBP7.88□□□□□ -1.15
BRCA1-221ENST00000493795 TBX2Q13207 712 aaPredicted RBP7.88□□□□□ -1.15
BRCA1-221ENST00000493795 TUBA3CQ13748 450 aa7.88□□□□□ -1.15
BRCA1-221ENST00000493795 CA9Q16790 459 aa7.88□□□□□ -1.15
BRCA1-221ENST00000493795 FIGNQ5HY92 759 aa7.88□□□□□ -1.15
BRCA1-221ENST00000493795 CDKL4Q5MAI5 379 aa7.88□□□□□ -1.15
BRCA1-221ENST00000493795 ADNP2Q6IQ32 1131 aa7.88□□□□□ -1.15
BRCA1-221ENST00000493795 CRELD2Q6UXH1 353 aaPredicted RBP7.88□□□□□ -1.15
BRCA1-221ENST00000493795 INO80EQ8NBZ0 244 aaPredicted RBP7.88□□□□□ -1.15
BRCA1-221ENST00000493795 ARRDC4Q8NCT1 418 aa7.88□□□□□ -1.15
BRCA1-221ENST00000493795 MAP3K14Q99558 947 aa7.88□□□□□ -1.15
BRCA1-221ENST00000493795 TMEM165Q9HC07 324 aa7.88□□□□□ -1.15
BRCA1-221ENST00000493795 PEX16Q9Y5Y5 336 aa7.88□□□□□ -1.15
BRCA1-221ENST00000493795 BBIP1A8MTZ0 92 aa7.87□□□□□ -1.15
BRCA1-221ENST00000493795 C1QTNF3-AMACRE9PGA6 284 aa7.87□□□□□ -1.15
BRCA1-221ENST00000493795 ACAT1P24752 427 aaKnown RBP7.87□□□□□ -1.15
BRCA1-221ENST00000493795 NPTX2P47972 431 aa7.87□□□□□ -1.15
BRCA1-221ENST00000493795 GRIA4P48058 902 aa7.87□□□□□ -1.15
BRCA1-221ENST00000493795 CLCN3P51790 818 aa7.87□□□□□ -1.15
BRCA1-221ENST00000493795 PFKPQ01813 784 aa7.87□□□□□ -1.15
BRCA1-221ENST00000493795 LIPEQ05469 1076 aa7.87□□□□□ -1.15
BRCA1-221ENST00000493795 RBM20Q5T481 1227 aaKnown RBP7.87□□□□□ -1.15
BRCA1-221ENST00000493795 PRAMEF17Q5VTA0 474 aa7.87□□□□□ -1.15
BRCA1-221ENST00000493795 AADACL4Q5VUY2 407 aa7.87□□□□□ -1.15
BRCA1-221ENST00000493795 PGM2Q96G03 612 aa7.87□□□□□ -1.15
BRCA1-221ENST00000493795 ZDHHC15Q96MV8 337 aa7.87□□□□□ -1.15
BRCA1-221ENST00000493795 OR52E6Q96RD3 313 aa7.87□□□□□ -1.15
BRCA1-221ENST00000493795 ELOVL4Q9GZR5 314 aa7.87□□□□□ -1.15
BRCA1-221ENST00000493795 TAS2R7Q9NYW3 318 aa7.87□□□□□ -1.15
BRCA1-221ENST00000493795 MTRRQ9UBK8 725 aa7.87□□□□□ -1.15
BRCA1-221ENST00000493795 CORO1CQ9ULV4 474 aaPredicted RBP7.87□□□□□ -1.15
BRCA1-221ENST00000493795 PRPF19Q9UMS4 504 aaKnown RBP7.87□□□□□ -1.15
BRCA1-221ENST00000493795 SLC27A6Q9Y2P4 619 aa7.87□□□□□ -1.15
BRCA1-221ENST00000493795 MAU2Q9Y6X3 613 aa7.87□□□□□ -1.15
BRCA1-221ENST00000493795 GAKO14976 1311 aa7.87□□□□□ -1.15
BRCA1-221ENST00000493795 CPSF1Q10570 1443 aaKnown RBP7.87□□□□□ -1.15
BRCA1-221ENST00000493795 FAM237BA0A1B0GVD1 139 aa7.87□□□□□ -1.15
BRCA1-221ENST00000493795 ANXA2P2A6NMY6 339 aa7.87□□□□□ -1.15
BRCA1-221ENST00000493795 CHADO15335 359 aa7.87□□□□□ -1.15
BRCA1-221ENST00000493795 ANXA2P07355 339 aaKnown RBP7.87□□□□□ -1.15
BRCA1-221ENST00000493795 SAGP10523 405 aaPredicted RBP7.87□□□□□ -1.15
BRCA1-221ENST00000493795 FOSL1P15407 271 aa7.87□□□□□ -1.15
BRCA1-221ENST00000493795 CDC25CP30307 473 aa7.87□□□□□ -1.15
BRCA1-221ENST00000493795 SEPHS1P49903 392 aa7.87□□□□□ -1.15
BRCA1-221ENST00000493795 RASGEF1BQ0VAM2 473 aa7.87□□□□□ -1.15
BRCA1-221ENST00000493795 PRKG2Q13237 762 aa7.87□□□□□ -1.15
BRCA1-221ENST00000493795 SCARF1Q14162 830 aa7.87□□□□□ -1.15
BRCA1-221ENST00000493795 RRP1BQ14684 758 aaKnown RBP7.87□□□□□ -1.15
BRCA1-221ENST00000493795 CWF19L1Q69YN2 538 aaKnown RBP7.87□□□□□ -1.15
BRCA1-221ENST00000493795 TAPT1Q6NXT6 567 aa7.87□□□□□ -1.15
BRCA1-221ENST00000493795 C16orf46Q6P387 395 aa7.87□□□□□ -1.15
BRCA1-221ENST00000493795 PSTKQ8IV42 348 aaKnown RBP7.87□□□□□ -1.15
BRCA1-221ENST00000493795 TBC1D21Q8IYX1 336 aa7.87□□□□□ -1.15
BRCA1-221ENST00000493795 TRMT2AQ8IZ69 625 aaKnown RBP7.87□□□□□ -1.15
BRCA1-221ENST00000493795 AGAP11Q8TF27 550 aa7.87□□□□□ -1.15
BRCA1-221ENST00000493795 CCDC107Q8WV48 283 aa7.87□□□□□ -1.15
BRCA1-221ENST00000493795 SLC5A5Q92911 643 aa7.87□□□□□ -1.15
BRCA1-221ENST00000493795 S100PBPQ96BU1 408 aa7.87□□□□□ -1.15
BRCA1-221ENST00000493795 NXPE2Q96DL1 559 aa7.87□□□□□ -1.15
BRCA1-221ENST00000493795 ETNK2Q9NVF9 386 aa7.87□□□□□ -1.15
BRCA1-221ENST00000493795 IFT80Q9P2H3 777 aaPredicted RBP7.87□□□□□ -1.15
BRCA1-221ENST00000493795 BTRCQ9Y297 605 aa7.87□□□□□ -1.15
BRCA1-221ENST00000493795 FKBP7Q9Y680 259 aa7.87□□□□□ -1.15
BRCA1-221ENST00000493795 ISM1B1AKI9 464 aa7.87□□□□□ -1.15
BRCA1-221ENST00000493795 DDX3YO15523 660 aaKnown RBP7.87□□□□□ -1.15
BRCA1-221ENST00000493795 UNC5CO95185 931 aa7.87□□□□□ -1.15
BRCA1-221ENST00000493795 UROSP10746 265 aa7.87□□□□□ -1.15
BRCA1-221ENST00000493795 MAGP20916 626 aa7.87□□□□□ -1.15
BRCA1-221ENST00000493795 IFI35P80217 286 aaPredicted RBP7.87□□□□□ -1.15
BRCA1-221ENST00000493795 PPP3CAQ08209 521 aa7.87□□□□□ -1.15
BRCA1-221ENST00000493795 DPYSL3Q14195 570 aa7.87□□□□□ -1.15
BRCA1-221ENST00000493795 EPHA10Q5JZY3 1008 aa7.87□□□□□ -1.15
BRCA1-221ENST00000493795 PARGQ86W56 976 aa7.87□□□□□ -1.15
BRCA1-221ENST00000493795 CACUL1Q86Y37 369 aa7.87□□□□□ -1.15
BRCA1-221ENST00000493795 PCDH19Q8TAB3 1148 aa7.87□□□□□ -1.15
BRCA1-221ENST00000493795 TCEAL3Q969E4 200 aa7.87□□□□□ -1.15
BRCA1-221ENST00000493795 MRPL57Q9BQC6 102 aaKnown RBP7.87□□□□□ -1.15
BRCA1-221ENST00000493795 KIAA1683Q9H0B3 1180 aa7.87□□□□□ -1.15
BRCA1-221ENST00000493795 METTL8Q9H825 291 aaKnown RBP7.87□□□□□ -1.15
BRCA1-221ENST00000493795 NOL11Q9H8H0 719 aaKnown RBP7.87□□□□□ -1.15
BRCA1-221ENST00000493795 MAGEE1Q9HCI5 957 aa7.87□□□□□ -1.15
BRCA1-221ENST00000493795 PAK6Q9NQU5 681 aaPredicted RBP7.87□□□□□ -1.15
BRCA1-221ENST00000493795 SMPD4Q9NXE4 827 aa7.87□□□□□ -1.15
BRCA1-221ENST00000493795 PRMT5O14744 637 aaPredicted RBP7.87□□□□□ -1.15
BRCA1-221ENST00000493795 HTR1BP28222 390 aa7.87□□□□□ -1.15
BRCA1-221ENST00000493795 HNF4AP41235 474 aa7.87□□□□□ -1.15
BRCA1-221ENST00000493795 ARCN1P48444 511 aaKnown RBP7.87□□□□□ -1.15
BRCA1-221ENST00000493795 MANFP55145 182 aaKnown RBP7.87□□□□□ -1.15
BRCA1-221ENST00000493795 FAM76BQ5HYJ3 339 aa7.87□□□□□ -1.15
BRCA1-221ENST00000493795 SLC25A25Q6KCM7 469 aa7.87□□□□□ -1.15
BRCA1-221ENST00000493795 ARCQ7LC44 396 aa7.87□□□□□ -1.15
BRCA1-221ENST00000493795 ZNF571Q7Z3V5 609 aaPredicted RBP7.87□□□□□ -1.15
BRCA1-221ENST00000493795 AMIGO2Q86SJ2 522 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms