RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 ADRA1DP25100 572 aa12.47□□□□□ -0.41
SNX17-208ENST00000493711 VIPR1P32241 457 aa12.47□□□□□ -0.41
SNX17-208ENST00000493711 DRD3P35462 400 aa12.47□□□□□ -0.41
SNX17-208ENST00000493711 MLLT3P42568 568 aaPredicted RBP12.47□□□□□ -0.41
SNX17-208ENST00000493711 TPMTP51580 245 aa12.47□□□□□ -0.41
SNX17-208ENST00000493711 FAM193AP78312 1265 aa12.47□□□□□ -0.41
SNX17-208ENST00000493711 ARHGEF7Q14155 803 aa12.47□□□□□ -0.41
SNX17-208ENST00000493711 GALNT3Q14435 633 aa12.47□□□□□ -0.41
SNX17-208ENST00000493711 TAF1AQ15573 450 aaPredicted RBP12.47□□□□□ -0.41
SNX17-208ENST00000493711 TMEM52BQ4KMG9 183 aa12.47□□□□□ -0.41
SNX17-208ENST00000493711 USP39Q53GS9 565 aaKnown RBP12.47□□□□□ -0.41
SNX17-208ENST00000493711 PCID2Q5JVF3 399 aa12.47□□□□□ -0.41
SNX17-208ENST00000493711 PIP5KL1Q5T9C9 394 aa12.47□□□□□ -0.41
SNX17-208ENST00000493711 AGBL4Q5VU57 503 aa12.47□□□□□ -0.41
SNX17-208ENST00000493711 ANKRD22Q5VYY1 191 aa12.47□□□□□ -0.41
SNX17-208ENST00000493711 ZDHHC20Q5W0Z9 365 aa12.47□□□□□ -0.41
SNX17-208ENST00000493711 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.47□□□□□ -0.41
SNX17-208ENST00000493711 CENPUQ71F23 418 aa12.47□□□□□ -0.41
SNX17-208ENST00000493711 C11orf74Q86VG3 221 aa12.47□□□□□ -0.41
SNX17-208ENST00000493711 AADATQ8N5Z0 425 aa12.47□□□□□ -0.41
SNX17-208ENST00000493711 PPHLN1Q8NEY8 458 aaKnown RBP12.47□□□□□ -0.41
SNX17-208ENST00000493711 MDGA1Q8NFP4 955 aa12.47□□□□□ -0.41
SNX17-208ENST00000493711 OR52K1Q8NGK4 314 aa12.47□□□□□ -0.41
SNX17-208ENST00000493711 IFT81Q8WYA0 676 aa12.47□□□□□ -0.41
SNX17-208ENST00000493711 PEX13Q92968 403 aa12.47□□□□□ -0.41
SNX17-208ENST00000493711 SPACA7Q96KW9 195 aa12.47□□□□□ -0.41
SNX17-208ENST00000493711 SERPINB12Q96P63 405 aa12.47□□□□□ -0.41
SNX17-208ENST00000493711 RANBP9Q96S59 729 aa12.47□□□□□ -0.41
SNX17-208ENST00000493711 PHOX2BQ99453 314 aa12.47□□□□□ -0.41
SNX17-208ENST00000493711 APOL2Q9BQE5 337 aa12.47□□□□□ -0.41
SNX17-208ENST00000493711 BTBD1Q9H0C5 482 aa12.47□□□□□ -0.41
SNX17-208ENST00000493711 CDH19Q9H159 772 aa12.47□□□□□ -0.41
SNX17-208ENST00000493711 PCDH12Q9NPG4 1184 aa12.47□□□□□ -0.41
SNX17-208ENST00000493711 SAMD15Q9P1V8 674 aa12.47□□□□□ -0.41
SNX17-208ENST00000493711 RIMKLBQ9ULI2 386 aa12.47□□□□□ -0.41
SNX17-208ENST00000493711 MYOFQ9NZM1 2061 aa12.47□□□□□ -0.41
SNX17-208ENST00000493711 A0A1W2PP55 124 aa12.46□□□□□ -0.41
SNX17-208ENST00000493711 TCRBV7S3A2A0A539 114 aa12.46□□□□□ -0.41
SNX17-208ENST00000493711 ESYT3A0FGR9 886 aa12.46□□□□□ -0.41
SNX17-208ENST00000493711 GOLGA8MH3BSY2 632 aa12.46□□□□□ -0.41
SNX17-208ENST00000493711 K7ESF4 209 aa12.46□□□□□ -0.41
SNX17-208ENST00000493711 PLRG1O43660 514 aaKnown RBP12.46□□□□□ -0.41
SNX17-208ENST00000493711 AVPR2P30518 371 aa12.46□□□□□ -0.41
SNX17-208ENST00000493711 HNF1BP35680 557 aa12.46□□□□□ -0.41
SNX17-208ENST00000493711 NUDT1P36639 197 aa12.46□□□□□ -0.41
SNX17-208ENST00000493711 MMP12P39900 470 aa12.46□□□□□ -0.41
SNX17-208ENST00000493711 MAGEA3P43357 314 aa12.46□□□□□ -0.41
SNX17-208ENST00000493711 CHRNA4P43681 627 aa12.46□□□□□ -0.41
SNX17-208ENST00000493711 TERF1P54274 439 aa12.46□□□□□ -0.41
SNX17-208ENST00000493711 FOXK2Q01167 660 aa12.46□□□□□ -0.41
SNX17-208ENST00000493711 POM121L1PQ3SYA9 428 aa12.46□□□□□ -0.41
SNX17-208ENST00000493711 FAM182AQ5T1J6 154 aa12.46□□□□□ -0.41
SNX17-208ENST00000493711 SYCP2LQ5T4T6 812 aa12.46□□□□□ -0.41
SNX17-208ENST00000493711 KIAA1161Q6NSJ0 714 aa12.46□□□□□ -0.41
SNX17-208ENST00000493711 WDR93Q6P2C0 686 aa12.46□□□□□ -0.41
SNX17-208ENST00000493711 ZDHHC24Q6UX98 284 aa12.46□□□□□ -0.41
SNX17-208ENST00000493711 SLC36A4Q6YBV0 504 aa12.46□□□□□ -0.41
SNX17-208ENST00000493711 CAND1Q86VP6 1230 aaKnown RBP12.46□□□□□ -0.41
SNX17-208ENST00000493711 ZSWIM9Q86XI8 627 aa12.46□□□□□ -0.41
SNX17-208ENST00000493711 TMEM105Q8N8V8 129 aa12.46□□□□□ -0.41
SNX17-208ENST00000493711 OR2T34Q8NGX1 318 aa12.46□□□□□ -0.41
SNX17-208ENST00000493711 FBXO25Q8TCJ0 367 aa12.46□□□□□ -0.41
SNX17-208ENST00000493711 CXorf40AQ8TE69 158 aa12.46□□□□□ -0.41
SNX17-208ENST00000493711 FMO2Q99518 471 aa12.46□□□□□ -0.41
SNX17-208ENST00000493711 GPR63Q9BZJ6 419 aa12.46□□□□□ -0.41
SNX17-208ENST00000493711 NEUROG2Q9H2A3 272 aa12.46□□□□□ -0.41
SNX17-208ENST00000493711 ZFYVE1Q9HBF4 777 aa12.46□□□□□ -0.41
SNX17-208ENST00000493711 MRM3Q9HC36 420 aaKnown RBP12.46□□□□□ -0.41
SNX17-208ENST00000493711 ZDHHC18Q9NUE0 388 aa12.46□□□□□ -0.41
SNX17-208ENST00000493711 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.46□□□□□ -0.41
SNX17-208ENST00000493711 B4GALT6Q9UBX8 382 aa12.46□□□□□ -0.41
SNX17-208ENST00000493711 RABGEF1Q9UJ41 708 aa12.46□□□□□ -0.41
SNX17-208ENST00000493711 FADS3Q9Y5Q0 445 aa12.46□□□□□ -0.41
SNX17-208ENST00000493711 C1orf232A0A0U1RR37 186 aa12.45□□□□□ -0.42
SNX17-208ENST00000493711 E7ESA3 106 aa12.45□□□□□ -0.42
SNX17-208ENST00000493711 TP73O15350 636 aa12.45□□□□□ -0.42
SNX17-208ENST00000493711 TTC4O95801 387 aa12.45□□□□□ -0.42
SNX17-208ENST00000493711 ELFN1P0C7U0 828 aa12.45□□□□□ -0.42
SNX17-208ENST00000493711 LPOP22079 712 aaPredicted RBP12.45□□□□□ -0.42
SNX17-208ENST00000493711 CD6P30203 668 aa12.45□□□□□ -0.42
SNX17-208ENST00000493711 HMGCLP35914 325 aa12.45□□□□□ -0.42
SNX17-208ENST00000493711 GRIA1P42261 906 aa12.45□□□□□ -0.42
SNX17-208ENST00000493711 ABL2P42684 1182 aa12.45□□□□□ -0.42
SNX17-208ENST00000493711 SESN2P58004 480 aaPredicted RBP12.45□□□□□ -0.42
SNX17-208ENST00000493711 RPS21P63220 83 aaKnown RBP12.45□□□□□ -0.42
SNX17-208ENST00000493711 SLMAPQ14BN4 828 aa12.45□□□□□ -0.42
SNX17-208ENST00000493711 SKIDA1Q1XH10 827 aa12.45□□□□□ -0.42
SNX17-208ENST00000493711 ERCC6LQ2NKX8 1250 aa12.45□□□□□ -0.42
SNX17-208ENST00000493711 MAP7D1Q3KQU3 841 aa12.45□□□□□ -0.42
SNX17-208ENST00000493711 ZNF528Q3MIS6 628 aa12.45□□□□□ -0.42
SNX17-208ENST00000493711 CRTC1Q6UUV9 634 aa12.45□□□□□ -0.42
SNX17-208ENST00000493711 ZNF534Q76KX8 674 aa12.45□□□□□ -0.42
SNX17-208ENST00000493711 GLT6D1Q7Z4J2 308 aa12.45□□□□□ -0.42
SNX17-208ENST00000493711 WDR5BQ86VZ2 330 aa12.45□□□□□ -0.42
SNX17-208ENST00000493711 LONP2Q86WA8 852 aa12.45□□□□□ -0.42
SNX17-208ENST00000493711 CACUL1Q86Y37 369 aa12.45□□□□□ -0.42
SNX17-208ENST00000493711 OR14C36Q8NHC7 312 aa12.45□□□□□ -0.42
SNX17-208ENST00000493711 BLOC1S5Q8TDH9 187 aa12.45□□□□□ -0.42
SNX17-208ENST00000493711 ASB12Q8WXK4 309 aa12.45□□□□□ -0.42
SNX17-208ENST00000493711 WNT2BQ93097 391 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms