RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 OSBPL9Q96SU4 736 aa11.65□□□□□ -0.54
CTSA-209ENST00000493522 NAPGQ99747 312 aaPredicted RBP11.65□□□□□ -0.54
CTSA-209ENST00000493522 MYOCQ99972 504 aa11.65□□□□□ -0.54
CTSA-209ENST00000493522 WRAP53Q9BUR4 548 aaKnown RBP11.65□□□□□ -0.54
CTSA-209ENST00000493522 FRMD8P1Q9BZ68 369 aaPredicted RBP11.65□□□□□ -0.54
CTSA-209ENST00000493522 SLC25A51Q9H1U9 297 aa11.65□□□□□ -0.54
CTSA-209ENST00000493522 TRHDEQ9UKU6 1024 aa11.65□□□□□ -0.54
CTSA-209ENST00000493522 SNX12Q9UMY4 172 aa11.65□□□□□ -0.54
CTSA-209ENST00000493522 CHKBQ9Y259 395 aa11.65□□□□□ -0.54
CTSA-209ENST00000493522 CFAP69A5D8W1 941 aa11.64□□□□□ -0.55
CTSA-209ENST00000493522 PGRMC1O00264 195 aaKnown RBP11.64□□□□□ -0.55
CTSA-209ENST00000493522 AREL1O15033 823 aa11.64□□□□□ -0.55
CTSA-209ENST00000493522 LIASO43766 372 aa11.64□□□□□ -0.55
CTSA-209ENST00000493522 PMPCBO75439 489 aa11.64□□□□□ -0.55
CTSA-209ENST00000493522 CER1O95813 267 aa11.64□□□□□ -0.55
CTSA-209ENST00000493522 MMP2P08253 660 aa11.64□□□□□ -0.55
CTSA-209ENST00000493522 PRLRP16471 622 aa11.64□□□□□ -0.55
CTSA-209ENST00000493522 CTPS1P17812 591 aa11.64□□□□□ -0.55
CTSA-209ENST00000493522 NFKBIAP25963 317 aa11.64□□□□□ -0.55
CTSA-209ENST00000493522 CD27P26842 260 aa11.64□□□□□ -0.55
CTSA-209ENST00000493522 CD68P34810 354 aaPredicted RBP11.64□□□□□ -0.55
CTSA-209ENST00000493522 RPS21P63220 83 aaKnown RBP11.64□□□□□ -0.55
CTSA-209ENST00000493522 IHHQ14623 411 aa11.64□□□□□ -0.55
CTSA-209ENST00000493522 ANKRD20A2Q5SQ80 823 aa11.64□□□□□ -0.55
CTSA-209ENST00000493522 ANKRD20A1Q5TYW2 823 aa11.64□□□□□ -0.55
CTSA-209ENST00000493522 ANKRD20A3Q5VUR7 823 aa11.64□□□□□ -0.55
CTSA-209ENST00000493522 NEK5Q6P3R8 708 aa11.64□□□□□ -0.55
CTSA-209ENST00000493522 IL27RAQ6UWB1 636 aa11.64□□□□□ -0.55
CTSA-209ENST00000493522 ARHGEF18Q6ZSZ5 1173 aa11.64□□□□□ -0.55
CTSA-209ENST00000493522 USP45Q70EL2 814 aa11.64□□□□□ -0.55
CTSA-209ENST00000493522 DPPA4Q7L190 304 aa11.64□□□□□ -0.55
CTSA-209ENST00000493522 GLRX5Q86SX6 157 aa11.64□□□□□ -0.55
CTSA-209ENST00000493522 NDUFAF2Q8N183 169 aa11.64□□□□□ -0.55
CTSA-209ENST00000493522 FAM71DQ8N9W8 422 aa11.64□□□□□ -0.55
CTSA-209ENST00000493522 SPATA22Q8NHS9 363 aa11.64□□□□□ -0.55
CTSA-209ENST00000493522 CCDC110Q8TBZ0 833 aa11.64□□□□□ -0.55
CTSA-209ENST00000493522 DNASE2BQ8WZ79 361 aa11.64□□□□□ -0.55
CTSA-209ENST00000493522 MS4A14Q96JA4 679 aa11.64□□□□□ -0.55
CTSA-209ENST00000493522 SLC6A18Q96N87 628 aa11.64□□□□□ -0.55
CTSA-209ENST00000493522 TMEM121Q9BTD3 319 aa11.64□□□□□ -0.55
CTSA-209ENST00000493522 GBA3Q9H227 469 aa11.64□□□□□ -0.55
CTSA-209ENST00000493522 CCDC86Q9H6F5 360 aaKnown RBP11.64□□□□□ -0.55
CTSA-209ENST00000493522 PCDH9Q9HC56 1237 aa11.64□□□□□ -0.55
CTSA-209ENST00000493522 KCND1Q9NSA2 647 aa11.64□□□□□ -0.55
CTSA-209ENST00000493522 UBP1Q9NZI7 540 aa11.64□□□□□ -0.55
CTSA-209ENST00000493522 TPX2Q9ULW0 747 aaKnown RBP11.64□□□□□ -0.55
CTSA-209ENST00000493522 PHTF1Q9UMS5 762 aa11.64□□□□□ -0.55
CTSA-209ENST00000493522 ZFR2Q9UPR6 939 aaKnown RBP11.64□□□□□ -0.55
CTSA-209ENST00000493522 GPSM3Q9Y4H4 160 aa11.64□□□□□ -0.55
CTSA-209ENST00000493522 A0A1W2PPC4 97 aa11.63□□□□□ -0.55
CTSA-209ENST00000493522 CTAGE9A4FU28 777 aa11.63□□□□□ -0.55
CTSA-209ENST00000493522 A8MX80 341 aa11.63□□□□□ -0.55
CTSA-209ENST00000493522 RIOK3O14730 519 aaKnown RBP11.63□□□□□ -0.55
CTSA-209ENST00000493522 BCAT2O15382 392 aaPredicted RBP11.63□□□□□ -0.55
CTSA-209ENST00000493522 SLC31A1O15431 190 aa11.63□□□□□ -0.55
CTSA-209ENST00000493522 LATO43561 262 aa11.63□□□□□ -0.55
CTSA-209ENST00000493522 MMP20O60882 483 aa11.63□□□□□ -0.55
CTSA-209ENST00000493522 MT-CYBP00156 380 aaPredicted RBP11.63□□□□□ -0.55
CTSA-209ENST00000493522 CAPNS1P04632 268 aa11.63□□□□□ -0.55
CTSA-209ENST00000493522 PDHA1P08559 390 aa11.63□□□□□ -0.55
CTSA-209ENST00000493522 ELFN1P0C7U0 828 aa11.63□□□□□ -0.55
CTSA-209ENST00000493522 ZNF883P0CG24 379 aa11.63□□□□□ -0.55
CTSA-209ENST00000493522 CYP2A6P11509 494 aaPredicted RBP11.63□□□□□ -0.55
CTSA-209ENST00000493522 TCP1P17987 556 aaKnown RBP11.63□□□□□ -0.55
CTSA-209ENST00000493522 PSMB4P28070 264 aa11.63□□□□□ -0.55
CTSA-209ENST00000493522 NUDT1P36639 197 aa11.63□□□□□ -0.55
CTSA-209ENST00000493522 TNNT3P45378 269 aaPredicted RBP11.63□□□□□ -0.55
CTSA-209ENST00000493522 GDF10P55107 478 aa11.63□□□□□ -0.55
CTSA-209ENST00000493522 RALGDSQ12967 914 aa11.63□□□□□ -0.55
CTSA-209ENST00000493522 GALNT3Q14435 633 aa11.63□□□□□ -0.55
CTSA-209ENST00000493522 SIX1Q15475 284 aaPredicted RBP11.63□□□□□ -0.55
CTSA-209ENST00000493522 SLC14A2Q15849 920 aa11.63□□□□□ -0.55
CTSA-209ENST00000493522 TMEM52BQ4KMG9 183 aa11.63□□□□□ -0.55
CTSA-209ENST00000493522 TMEM259Q4ZIN3 620 aa11.63□□□□□ -0.55
CTSA-209ENST00000493522 NAPEPLDQ6IQ20 393 aa11.63□□□□□ -0.55
CTSA-209ENST00000493522 CCNI2Q6ZMN8 369 aaPredicted RBP11.63□□□□□ -0.55
CTSA-209ENST00000493522 ZSCAN30Q86W11 494 aa11.63□□□□□ -0.55
CTSA-209ENST00000493522 RASGEF1CQ8N431 466 aa11.63□□□□□ -0.55
CTSA-209ENST00000493522 PNPLA1Q8N8W4 532 aa11.63□□□□□ -0.55
CTSA-209ENST00000493522 IPMKQ8NFU5 416 aa11.63□□□□□ -0.55
CTSA-209ENST00000493522 SETD7Q8WTS6 366 aaKnown RBP11.63□□□□□ -0.55
CTSA-209ENST00000493522 COG1Q8WTW3 980 aa11.63□□□□□ -0.55
CTSA-209ENST00000493522 IFT43Q96FT9 208 aa11.63□□□□□ -0.55
CTSA-209ENST00000493522 FEM1CQ96JP0 617 aa11.63□□□□□ -0.55
CTSA-209ENST00000493522 SERAC1Q96JX3 654 aa11.63□□□□□ -0.55
CTSA-209ENST00000493522 FCRL5Q96RD9 977 aa11.63□□□□□ -0.55
CTSA-209ENST00000493522 NAP1L3Q99457 506 aaPredicted RBP11.63□□□□□ -0.55
CTSA-209ENST00000493522 GAREM1Q9H706 876 aa11.63□□□□□ -0.55
CTSA-209ENST00000493522 FZD3Q9NPG1 666 aa11.63□□□□□ -0.55
CTSA-209ENST00000493522 AASDHPPTQ9NRN7 309 aa11.63□□□□□ -0.55
CTSA-209ENST00000493522 SMARCAL1Q9NZC9 954 aa11.63□□□□□ -0.55
CTSA-209ENST00000493522 B4GALT6Q9UBX8 382 aa11.63□□□□□ -0.55
CTSA-209ENST00000493522 PCOLCE2Q9UKZ9 415 aa11.63□□□□□ -0.55
CTSA-209ENST00000493522 ZNF148Q9UQR1 794 aa11.63□□□□□ -0.55
CTSA-209ENST00000493522 DMTF1Q9Y222 760 aa11.63□□□□□ -0.55
CTSA-209ENST00000493522 ZKSCAN5Q9Y2L8 839 aa11.63□□□□□ -0.55
CTSA-209ENST00000493522 SLCO1B1Q9Y6L6 691 aa11.63□□□□□ -0.55
CTSA-209ENST00000493522 ACACAQ13085 2346 aa11.62□□□□□ -0.55
CTSA-209ENST00000493522 IGLON5A6NGN9 336 aa11.62□□□□□ -0.55
CTSA-209ENST00000493522 CAPN8A6NHC0 703 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms