RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-231ENST00000492170 WDR26Q9H7D7 661 aa15.4■□□□□ 0.06
MRPL55-231ENST00000492170 FGF22Q9HCT0 170 aa15.4■□□□□ 0.06
MRPL55-231ENST00000492170 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.4■□□□□ 0.06
MRPL55-231ENST00000492170 CNOT8Q9UFF9 292 aaKnown RBP15.4■□□□□ 0.06
MRPL55-231ENST00000492170 LRP4O75096 1905 aa15.39■□□□□ 0.05
MRPL55-231ENST00000492170 HELZ2Q9BYK8 2649 aaKnown RBP15.39■□□□□ 0.05
MRPL55-231ENST00000492170 A0A1W2PQ67 120 aa15.39■□□□□ 0.05
MRPL55-231ENST00000492170 GOLGA6L19H0YKK7 550 aa15.39■□□□□ 0.05
MRPL55-231ENST00000492170 H3BRJ5 948 aa15.39■□□□□ 0.05
MRPL55-231ENST00000492170 TRAFD1O14545 582 aaPredicted RBP15.39■□□□□ 0.05
MRPL55-231ENST00000492170 TNFRSF10CO14798 259 aa15.39■□□□□ 0.05
MRPL55-231ENST00000492170 PLD2O14939 933 aa15.39■□□□□ 0.05
MRPL55-231ENST00000492170 LRCH4O75427 683 aa15.39■□□□□ 0.05
MRPL55-231ENST00000492170 FTLP02792 175 aaPredicted RBP15.39■□□□□ 0.05
MRPL55-231ENST00000492170 HOXC4P09017 264 aaPredicted RBP15.39■□□□□ 0.05
MRPL55-231ENST00000492170 HCAR3P49019 387 aa15.39■□□□□ 0.05
MRPL55-231ENST00000492170 INHBCP55103 352 aa15.39■□□□□ 0.05
MRPL55-231ENST00000492170 FANCCQ00597 558 aa15.39■□□□□ 0.05
MRPL55-231ENST00000492170 DPYSQ14117 519 aa15.39■□□□□ 0.05
MRPL55-231ENST00000492170 ZNF235Q14590 738 aa15.39■□□□□ 0.05
MRPL55-231ENST00000492170 LBRQ14739 615 aaKnown RBP15.39■□□□□ 0.05
MRPL55-231ENST00000492170 PCSK4Q6UW60 755 aa15.39■□□□□ 0.05
MRPL55-231ENST00000492170 NYAP1Q6ZVC0 841 aa15.39■□□□□ 0.05
MRPL55-231ENST00000492170 CYP4V2Q6ZWL3 525 aaPredicted RBP15.39■□□□□ 0.05
MRPL55-231ENST00000492170 ZNF571Q7Z3V5 609 aaPredicted RBP15.39■□□□□ 0.05
MRPL55-231ENST00000492170 B3GNT8Q7Z7M8 397 aa15.39■□□□□ 0.05
MRPL55-231ENST00000492170 CCNJLQ8IV13 435 aa15.39■□□□□ 0.05
MRPL55-231ENST00000492170 FBXO39Q8N4B4 442 aa15.39■□□□□ 0.05
MRPL55-231ENST00000492170 GPR156Q8NFN8 814 aa15.39■□□□□ 0.05
MRPL55-231ENST00000492170 SNRNP27Q8WVK2 155 aaKnown RBP15.39■□□□□ 0.05
MRPL55-231ENST00000492170 ZNF599Q96NL3 588 aa15.39■□□□□ 0.05
MRPL55-231ENST00000492170 PSKH2Q96QS6 385 aa15.39■□□□□ 0.05
MRPL55-231ENST00000492170 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.39■□□□□ 0.05
MRPL55-231ENST00000492170 TRIM7Q9C029 511 aa15.39■□□□□ 0.05
MRPL55-231ENST00000492170 LRRN3Q9H3W5 708 aa15.39■□□□□ 0.05
MRPL55-231ENST00000492170 CWC15Q9P013 229 aaKnown RBP15.39■□□□□ 0.05
MRPL55-231ENST00000492170 SSUH2Q9Y2M2 353 aa15.39■□□□□ 0.05
MRPL55-231ENST00000492170 KIF26BQ2KJY2 2108 aa15.38■□□□□ 0.05
MRPL55-231ENST00000492170 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.38■□□□□ 0.05
MRPL55-231ENST00000492170 A0A1W2PQM1 296 aa15.38■□□□□ 0.05
MRPL55-231ENST00000492170 TMEM202A6NGA9 273 aa15.38■□□□□ 0.05
MRPL55-231ENST00000492170 PDE2AO00408 941 aaPredicted RBP15.38■□□□□ 0.05
MRPL55-231ENST00000492170 SOCS5O75159 536 aa15.38■□□□□ 0.05
MRPL55-231ENST00000492170 SERPINC1P01008 464 aa15.38■□□□□ 0.05
MRPL55-231ENST00000492170 MYBL1P10243 752 aa15.38■□□□□ 0.05
MRPL55-231ENST00000492170 GLB1P16278 677 aa15.38■□□□□ 0.05
MRPL55-231ENST00000492170 NFKBIAP25963 317 aa15.38■□□□□ 0.05
MRPL55-231ENST00000492170 CCKBRP32239 447 aa15.38■□□□□ 0.05
MRPL55-231ENST00000492170 PCK1P35558 622 aa15.38■□□□□ 0.05
MRPL55-231ENST00000492170 HSPA9P38646 679 aaKnown RBP15.38■□□□□ 0.05
MRPL55-231ENST00000492170 PBX1P40424 430 aa15.38■□□□□ 0.05
MRPL55-231ENST00000492170 ARL4AP40617 200 aa15.38■□□□□ 0.05
MRPL55-231ENST00000492170 PRKCIP41743 596 aa15.38■□□□□ 0.05
MRPL55-231ENST00000492170 KLHL30Q0D2K2 578 aa15.38■□□□□ 0.05
MRPL55-231ENST00000492170 ACOX1Q15067 660 aa15.38■□□□□ 0.05
MRPL55-231ENST00000492170 TSR1Q2NL82 804 aaKnown RBP15.38■□□□□ 0.05
MRPL55-231ENST00000492170 KCTD16Q68DU8 428 aa15.38■□□□□ 0.05
MRPL55-231ENST00000492170 RAB11FIP2Q7L804 512 aa15.38■□□□□ 0.05
MRPL55-231ENST00000492170 ZNF605Q86T29 641 aa15.38■□□□□ 0.05
MRPL55-231ENST00000492170 FAM46DQ8NEK8 389 aa15.38■□□□□ 0.05
MRPL55-231ENST00000492170 FOXP3Q9BZS1 431 aa15.38■□□□□ 0.05
MRPL55-231ENST00000492170 MRPL47Q9HD33 250 aaKnown RBP15.38■□□□□ 0.05
MRPL55-231ENST00000492170 MRPL40Q9NQ50 206 aaKnown RBP15.38■□□□□ 0.05
MRPL55-231ENST00000492170 AIPL1Q9NZN9 384 aa15.38■□□□□ 0.05
MRPL55-231ENST00000492170 MYO1AQ9UBC5 1043 aa15.38■□□□□ 0.05
MRPL55-231ENST00000492170 B4GALT6Q9UBX8 382 aa15.38■□□□□ 0.05
MRPL55-231ENST00000492170 MOSPD1Q9UJG1 213 aa15.38■□□□□ 0.05
MRPL55-231ENST00000492170 ANKRD36A6QL64 1941 aa15.37■□□□□ 0.05
MRPL55-231ENST00000492170 CFAP46Q8IYW2 2715 aa15.37■□□□□ 0.05
MRPL55-231ENST00000492170 A8MX80 341 aa15.37■□□□□ 0.05
MRPL55-231ENST00000492170 B4DGG1 531 aa15.37■□□□□ 0.05
MRPL55-231ENST00000492170 K7ENP7 123 aa15.37■□□□□ 0.05
MRPL55-231ENST00000492170 DDX3XO00571 662 aaKnown RBP eCLIP15.37■□□□□ 0.053e-7■■■■□ 21.3
MRPL55-231ENST00000492170 CPP00450 1065 aa15.37■□□□□ 0.05
MRPL55-231ENST00000492170 PNLIPP16233 465 aa15.37■□□□□ 0.05
MRPL55-231ENST00000492170 UGT1A5P35504 534 aa15.37■□□□□ 0.05
MRPL55-231ENST00000492170 TRIM23P36406 574 aa15.37■□□□□ 0.05
MRPL55-231ENST00000492170 SLC10A7Q0GE19 358 aa15.37■□□□□ 0.05
MRPL55-231ENST00000492170 CLN3Q13286 438 aa15.37■□□□□ 0.05
MRPL55-231ENST00000492170 C14orf28Q4W4Y0 310 aa15.37■□□□□ 0.05
MRPL55-231ENST00000492170 CERCAMQ5T4B2 595 aa15.37■□□□□ 0.05
MRPL55-231ENST00000492170 E4F1Q66K89 784 aaPredicted RBP15.37■□□□□ 0.05
MRPL55-231ENST00000492170 PNCKQ6P2M8 343 aa15.37■□□□□ 0.05
MRPL55-231ENST00000492170 INO80CQ6PI98 192 aaPredicted RBP15.37■□□□□ 0.05
MRPL55-231ENST00000492170 TMCO3Q6UWJ1 677 aa15.37■□□□□ 0.05
MRPL55-231ENST00000492170 CCDC81Q6ZN84 652 aa15.37■□□□□ 0.05
MRPL55-231ENST00000492170 JAMLQ86YT9 394 aa15.37■□□□□ 0.05
MRPL55-231ENST00000492170 BBS5Q8N3I7 341 aa15.37■□□□□ 0.05
MRPL55-231ENST00000492170 Q8N9G6 341 aaPredicted RBP15.37■□□□□ 0.05
MRPL55-231ENST00000492170 KIAA1524Q8TCG1 905 aa15.37■□□□□ 0.05
MRPL55-231ENST00000492170 PDCD6IPQ8WUM4 868 aaKnown RBP15.37■□□□□ 0.05
MRPL55-231ENST00000492170 SPOCK2Q92563 424 aa15.37■□□□□ 0.05
MRPL55-231ENST00000492170 NUS1Q96E22 293 aa15.37■□□□□ 0.05
MRPL55-231ENST00000492170 TMEM168Q9H0V1 697 aa15.37■□□□□ 0.05
MRPL55-231ENST00000492170 CYP4F12Q9HCS2 524 aa15.37■□□□□ 0.05
MRPL55-231ENST00000492170 WDR70Q9NW82 654 aa15.37■□□□□ 0.05
MRPL55-231ENST00000492170 KCTD5Q9NXV2 234 aa15.37■□□□□ 0.05
MRPL55-231ENST00000492170 APPL1Q9UKG1 709 aa15.37■□□□□ 0.05
MRPL55-231ENST00000492170 PCDHGA7Q9Y5G6 932 aa15.37■□□□□ 0.05
MRPL55-231ENST00000492170 PRSS38A1L453 326 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms