RNA–Protein interactions for RNA: ENST00000491867.5

ATG4B-222, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 435 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-222ENST00000491867 TNFRSF10CO14798 259 aa13.9□□□□□ -0.18
ATG4B-222ENST00000491867 RFPL1O75677 317 aa13.9□□□□□ -0.18
ATG4B-222ENST00000491867 STK17BO94768 372 aa13.9□□□□□ -0.18
ATG4B-222ENST00000491867 ECEL1O95672 775 aa13.9□□□□□ -0.18
ATG4B-222ENST00000491867 PDGFAP04085 211 aa13.9□□□□□ -0.18
ATG4B-222ENST00000491867 FGF1P05230 155 aa13.9□□□□□ -0.18
ATG4B-222ENST00000491867 LIG3P49916 1009 aa13.9□□□□□ -0.18
ATG4B-222ENST00000491867 RNASE9P60153 205 aaKnown RBP13.9□□□□□ -0.18
ATG4B-222ENST00000491867 DEUP1Q05D60 604 aa13.9□□□□□ -0.18
ATG4B-222ENST00000491867 EIF2S3LQ2VIR3 472 aaKnown RBP13.9□□□□□ -0.18
ATG4B-222ENST00000491867 C1QL3Q5VWW1 255 aa13.9□□□□□ -0.18
ATG4B-222ENST00000491867 SLC26A9Q7LBE3 791 aa13.9□□□□□ -0.18
ATG4B-222ENST00000491867 PASD1Q8IV76 773 aa13.9□□□□□ -0.18
ATG4B-222ENST00000491867 HMCESQ96FZ2 354 aa13.9□□□□□ -0.18
ATG4B-222ENST00000491867 GDAP1L1Q96MZ0 367 aa13.9□□□□□ -0.18
ATG4B-222ENST00000491867 SUDS3Q9H7L9 328 aaPredicted RBP13.9□□□□□ -0.18
ATG4B-222ENST00000491867 PCDH12Q9NPG4 1184 aa13.9□□□□□ -0.18
ATG4B-222ENST00000491867 RRN3Q9NYV6 651 aa13.9□□□□□ -0.18
ATG4B-222ENST00000491867 POLEQ07864 2286 aa13.9□□□□□ -0.18
ATG4B-222ENST00000491867 ANKRD36A6QL64 1941 aa13.9□□□□□ -0.18
ATG4B-222ENST00000491867 IGHV1OR21-1A0A087WYE8 117 aa13.89□□□□□ -0.19
ATG4B-222ENST00000491867 ERBB2P04626 1255 aa13.89□□□□□ -0.19
ATG4B-222ENST00000491867 CCNB1P14635 433 aa13.89□□□□□ -0.19
ATG4B-222ENST00000491867 KELP23276 732 aa13.89□□□□□ -0.19
ATG4B-222ENST00000491867 F8A1P23610 371 aa13.89□□□□□ -0.19
ATG4B-222ENST00000491867 ETFBP38117 255 aa13.89□□□□□ -0.19
ATG4B-222ENST00000491867 STAT5AP42229 794 aa13.89□□□□□ -0.19
ATG4B-222ENST00000491867 SULT1E1P49888 294 aa13.89□□□□□ -0.19
ATG4B-222ENST00000491867 SUOXP51687 545 aa13.89□□□□□ -0.19
ATG4B-222ENST00000491867 STX17P56962 302 aa13.89□□□□□ -0.19
ATG4B-222ENST00000491867 MC2RQ01718 297 aa13.89□□□□□ -0.19
ATG4B-222ENST00000491867 SLC6A3Q01959 620 aa13.89□□□□□ -0.19
ATG4B-222ENST00000491867 RAD51Q06609 339 aa13.89□□□□□ -0.19
ATG4B-222ENST00000491867 PAK1Q13153 545 aa13.89□□□□□ -0.19
ATG4B-222ENST00000491867 SQSTM1Q13501 440 aa13.89□□□□□ -0.19
ATG4B-222ENST00000491867 ACBD5Q5T8D3 534 aaPredicted RBP13.89□□□□□ -0.19
ATG4B-222ENST00000491867 CEACAM20Q6UY09 585 aa13.89□□□□□ -0.19
ATG4B-222ENST00000491867 ENOSF1Q7L5Y1 443 aa13.89□□□□□ -0.19
ATG4B-222ENST00000491867 NRROSQ86YC3 692 aa13.89□□□□□ -0.19
ATG4B-222ENST00000491867 NETO2Q8NC67 525 aa13.89□□□□□ -0.19
ATG4B-222ENST00000491867 PATE1Q8WXA2 126 aa13.89□□□□□ -0.19
ATG4B-222ENST00000491867 TBCBQ99426 244 aa13.89□□□□□ -0.19
ATG4B-222ENST00000491867 TTYH3Q9C0H2 523 aa13.89□□□□□ -0.19
ATG4B-222ENST00000491867 TRIT1Q9H3H1 467 aaKnown RBP13.89□□□□□ -0.19
ATG4B-222ENST00000491867 UBE2TQ9NPD8 197 aaPredicted RBP13.89□□□□□ -0.19
ATG4B-222ENST00000491867 NDFIP2Q9NV92 336 aa13.89□□□□□ -0.19
ATG4B-222ENST00000491867 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.89□□□□□ -0.19
ATG4B-222ENST00000491867 TAAR2Q9P1P5 351 aa13.89□□□□□ -0.19
ATG4B-222ENST00000491867 HPCAL4Q9UM19 191 aa13.89□□□□□ -0.19
ATG4B-222ENST00000491867 MAP4K5Q9Y4K4 846 aa13.89□□□□□ -0.19
ATG4B-222ENST00000491867 TNRC6AQ8NDV7 1962 aaKnown RBP13.89□□□□□ -0.19
ATG4B-222ENST00000491867 PRSS38A1L453 326 aa13.88□□□□□ -0.19
ATG4B-222ENST00000491867 WIPF3A6NGB9 483 aa13.88□□□□□ -0.19
ATG4B-222ENST00000491867 A8MU76 341 aa13.88□□□□□ -0.19
ATG4B-222ENST00000491867 BIN1O00499 593 aa13.88□□□□□ -0.19
ATG4B-222ENST00000491867 PPM1DO15297 605 aa13.88□□□□□ -0.19
ATG4B-222ENST00000491867 INSIG1O15503 277 aa13.88□□□□□ -0.19
ATG4B-222ENST00000491867 TMCC1O94876 653 aa13.88□□□□□ -0.19
ATG4B-222ENST00000491867 F9P00740 461 aa13.88□□□□□ -0.19
ATG4B-222ENST00000491867 FURINP09958 794 aa13.88□□□□□ -0.19
ATG4B-222ENST00000491867 MRPL49Q13405 166 aaKnown RBP13.88□□□□□ -0.19
ATG4B-222ENST00000491867 ERV3-1Q14264 604 aa13.88□□□□□ -0.19
ATG4B-222ENST00000491867 AGERQ15109 404 aa13.88□□□□□ -0.19
ATG4B-222ENST00000491867 SNAP47Q5SQN1 464 aa13.88□□□□□ -0.19
ATG4B-222ENST00000491867 TMEM71Q6P5X7 295 aa13.88□□□□□ -0.19
ATG4B-222ENST00000491867 ZNF397Q8NF99 534 aaPredicted RBP13.88□□□□□ -0.19
ATG4B-222ENST00000491867 NT5C3BQ969T7 300 aa13.88□□□□□ -0.19
ATG4B-222ENST00000491867 PGAP3Q96FM1 320 aaPredicted RBP13.88□□□□□ -0.19
ATG4B-222ENST00000491867 DPYSL5Q9BPU6 564 aa13.88□□□□□ -0.19
ATG4B-222ENST00000491867 ZPBPQ9BS86 351 aa13.88□□□□□ -0.19
ATG4B-222ENST00000491867 LGR4Q9BXB1 951 aa13.88□□□□□ -0.19
ATG4B-222ENST00000491867 ZMYND15Q9H091 742 aa13.88□□□□□ -0.19
ATG4B-222ENST00000491867 SYNCQ9H7C4 482 aa13.88□□□□□ -0.19
ATG4B-222ENST00000491867 DONSONQ9NYP3 566 aa13.88□□□□□ -0.19
ATG4B-222ENST00000491867 STAP1Q9ULZ2 295 aa13.88□□□□□ -0.19
ATG4B-222ENST00000491867 POLHQ9Y253 713 aa13.88□□□□□ -0.19
ATG4B-222ENST00000491867 MFHAS1Q9Y4C4 1052 aa13.88□□□□□ -0.19
ATG4B-222ENST00000491867 TMEM184BQ9Y519 407 aaPredicted RBP13.88□□□□□ -0.19
ATG4B-222ENST00000491867 PCDHB3Q9Y5E6 796 aa13.88□□□□□ -0.19
ATG4B-222ENST00000491867 RPS6KL1Q9Y6S9 549 aa13.88□□□□□ -0.19
ATG4B-222ENST00000491867 PCNX1Q96RV3 2341 aa13.88□□□□□ -0.19
ATG4B-222ENST00000491867 SPG11Q96JI7 2443 aa13.88□□□□□ -0.19
ATG4B-222ENST00000491867 TCP11X1B4DZS4 312 aa13.87□□□□□ -0.19
ATG4B-222ENST00000491867 PIGNO95427 931 aa13.87□□□□□ -0.19
ATG4B-222ENST00000491867 IGSF6O95976 241 aa13.87□□□□□ -0.19
ATG4B-222ENST00000491867 HOXC4P09017 264 aaPredicted RBP13.87□□□□□ -0.19
ATG4B-222ENST00000491867 MAN1A1P33908 653 aa13.87□□□□□ -0.19
ATG4B-222ENST00000491867 MMP12P39900 470 aa13.87□□□□□ -0.19
ATG4B-222ENST00000491867 STAT1P42224 750 aa13.87□□□□□ -0.19
ATG4B-222ENST00000491867 NOP2P46087 812 aaKnown RBP13.87□□□□□ -0.19
ATG4B-222ENST00000491867 PMS2P54278 862 aa13.87□□□□□ -0.19
ATG4B-222ENST00000491867 ILF3Q12906 894 aaKnown RBP eCLIP13.87□□□□□ -0.19
ATG4B-222ENST00000491867 UGP2Q16851 508 aa13.87□□□□□ -0.19
ATG4B-222ENST00000491867 TSR1Q2NL82 804 aaKnown RBP13.87□□□□□ -0.19
ATG4B-222ENST00000491867 ERAP2Q6P179 960 aa13.87□□□□□ -0.19
ATG4B-222ENST00000491867 GJB7Q6PEY0 223 aa13.87□□□□□ -0.19
ATG4B-222ENST00000491867 TRIM65Q6PJ69 517 aa13.87□□□□□ -0.19
ATG4B-222ENST00000491867 SLC30A9Q6PML9 568 aa13.87□□□□□ -0.19
ATG4B-222ENST00000491867 TMEM135Q86UB9 458 aa13.87□□□□□ -0.19
ATG4B-222ENST00000491867 ESX1Q8N693 406 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms