RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 ARHGAP12Q8IWW6 846 aa8.79□□□□□ -1
NUP50-217ENST00000491860 SPACA3Q8IXA5 215 aa8.79□□□□□ -1
NUP50-217ENST00000491860 ATPAF2Q8N5M1 289 aa8.79□□□□□ -1
NUP50-217ENST00000491860 NIPA2Q8N8Q9 360 aa8.79□□□□□ -1
NUP50-217ENST00000491860 OR56A4Q8NGH8 313 aa8.79□□□□□ -1
NUP50-217ENST00000491860 TMEM74Q96NL1 305 aa8.79□□□□□ -1
NUP50-217ENST00000491860 SLC46A1Q96NT5 459 aa8.79□□□□□ -1
NUP50-217ENST00000491860 NUDCD1Q96RS6 583 aa8.79□□□□□ -1
NUP50-217ENST00000491860 RBM15Q96T37 977 aaKnown RBP eCLIP8.79□□□□□ -1
NUP50-217ENST00000491860 CCDC3Q9BQI4 270 aa8.79□□□□□ -1
NUP50-217ENST00000491860 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.79□□□□□ -1
NUP50-217ENST00000491860 CLPBQ9H078 707 aa8.79□□□□□ -1
NUP50-217ENST00000491860 WDR26Q9H7D7 661 aa8.79□□□□□ -1
NUP50-217ENST00000491860 PHPT1Q9NRX4 125 aaPredicted RBP8.79□□□□□ -1
NUP50-217ENST00000491860 GPATCH2LQ9NWQ4 482 aa8.79□□□□□ -1
NUP50-217ENST00000491860 CWC15Q9P013 229 aaKnown RBP8.79□□□□□ -1
NUP50-217ENST00000491860 AMACRQ9UHK6 382 aa8.79□□□□□ -1
NUP50-217ENST00000491860 GPR34Q9UPC5 381 aa8.79□□□□□ -1
NUP50-217ENST00000491860 SATB2Q9UPW6 733 aa8.79□□□□□ -1
NUP50-217ENST00000491860 ENTPD2Q9Y5L3 495 aa8.79□□□□□ -1
NUP50-217ENST00000491860 LRP4O75096 1905 aa8.79□□□□□ -1
NUP50-217ENST00000491860 MYO18BQ8IUG5 2567 aa8.78□□□□□ -1
NUP50-217ENST00000491860 MGAQ8IWI9 3026 aa8.78□□□□□ -1
NUP50-217ENST00000491860 GOLGA6L19H0YKK7 550 aa8.78□□□□□ -1
NUP50-217ENST00000491860 MYO1FO00160 1098 aa8.78□□□□□ -1
NUP50-217ENST00000491860 DDX3XO00571 662 aaKnown RBP eCLIP8.78□□□□□ -1
NUP50-217ENST00000491860 NTN3O00634 580 aaPredicted RBP8.78□□□□□ -1
NUP50-217ENST00000491860 TRAFD1O14545 582 aaPredicted RBP8.78□□□□□ -1
NUP50-217ENST00000491860 HTRA2O43464 458 aaPredicted RBP8.78□□□□□ -1
NUP50-217ENST00000491860 NUDT21O43809 227 aaKnown RBP8.78□□□□□ -1
NUP50-217ENST00000491860 CPP00450 1065 aa8.78□□□□□ -1
NUP50-217ENST00000491860 SERPING1P05155 500 aa8.78□□□□□ -1
NUP50-217ENST00000491860 ITGA2BP08514 1039 aa8.78□□□□□ -1
NUP50-217ENST00000491860 MYCLP1P12525 358 aaPredicted RBP8.78□□□□□ -1
NUP50-217ENST00000491860 GLB1P16278 677 aa8.78□□□□□ -1
NUP50-217ENST00000491860 VIPR1P32241 457 aa8.78□□□□□ -1
NUP50-217ENST00000491860 CFHR1Q03591 330 aa8.78□□□□□ -1
NUP50-217ENST00000491860 ARHGEF7Q14155 803 aa8.78□□□□□ -1
NUP50-217ENST00000491860 KRT81Q14533 505 aa8.78□□□□□ -1
NUP50-217ENST00000491860 ACOX1Q15067 660 aa8.78□□□□□ -1
NUP50-217ENST00000491860 CA9Q16790 459 aa8.78□□□□□ -1
NUP50-217ENST00000491860 C3orf38Q5JPI3 329 aa8.78□□□□□ -1
NUP50-217ENST00000491860 MARC1Q5VT66 337 aa8.78□□□□□ -1
NUP50-217ENST00000491860 TIGD7Q6NT04 549 aaPredicted RBP8.78□□□□□ -1
NUP50-217ENST00000491860 CAVIN1Q6NZI2 390 aaKnown RBP8.78□□□□□ -1
NUP50-217ENST00000491860 USP45Q70EL2 814 aa8.78□□□□□ -1
NUP50-217ENST00000491860 RD3Q7Z3Z2 195 aa8.78□□□□□ -1
NUP50-217ENST00000491860 POLNQ7Z5Q5 900 aa8.78□□□□□ -1
NUP50-217ENST00000491860 TAF8Q7Z7C8 310 aa8.78□□□□□ -1
NUP50-217ENST00000491860 CLEC14AQ86T13 490 aa8.78□□□□□ -1
NUP50-217ENST00000491860 MAP7D3Q8IWC1 876 aa8.78□□□□□ -1
NUP50-217ENST00000491860 ARFGAP1Q8N6T3 406 aa8.78□□□□□ -1
NUP50-217ENST00000491860 PCDH19Q8TAB3 1148 aa8.78□□□□□ -1
NUP50-217ENST00000491860 FATE1Q969F0 183 aa8.78□□□□□ -1
NUP50-217ENST00000491860 TSACCQ96A04 125 aaPredicted RBP8.78□□□□□ -1
NUP50-217ENST00000491860 NUS1Q96E22 293 aa8.78□□□□□ -1
NUP50-217ENST00000491860 GFM1Q96RP9 751 aaKnown RBP8.78□□□□□ -1
NUP50-217ENST00000491860 PEBP4Q96S96 227 aa8.78□□□□□ -1
NUP50-217ENST00000491860 MGME1Q9BQP7 344 aa8.78□□□□□ -1
NUP50-217ENST00000491860 ANP32EQ9BTT0 268 aa8.78□□□□□ -1
NUP50-217ENST00000491860 TCEAL2Q9H3H9 227 aaPredicted RBP8.78□□□□□ -1
NUP50-217ENST00000491860 ASCL3Q9NQ33 180 aa8.78□□□□□ -1
NUP50-217ENST00000491860 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.78□□□□□ -1
NUP50-217ENST00000491860 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.78□□□□□ -1
NUP50-217ENST00000491860 AKAP7Q9P0M2 348 aaPredicted RBP8.78□□□□□ -1
NUP50-217ENST00000491860 MYO1AQ9UBC5 1043 aa8.78□□□□□ -1
NUP50-217ENST00000491860 GULP1Q9UBP9 304 aa8.78□□□□□ -1
NUP50-217ENST00000491860 APPL1Q9UKG1 709 aa8.78□□□□□ -1
NUP50-217ENST00000491860 COQ6Q9Y2Z9 468 aa8.78□□□□□ -1
NUP50-217ENST00000491860 LUC7L2Q9Y383 392 aaKnown RBP8.78□□□□□ -1
NUP50-217ENST00000491860 OR1A2Q9Y585 309 aa8.78□□□□□ -1
NUP50-217ENST00000491860 UNC13CQ8NB66 2214 aa8.78□□□□□ -1
NUP50-217ENST00000491860 NAV2Q8IVL1 2488 aa8.77□□□□□ -1.01
NUP50-217ENST00000491860 CYSRT1A8MQ03 144 aa8.77□□□□□ -1.01
NUP50-217ENST00000491860 CDRT15L2A8MXV6 281 aa8.77□□□□□ -1.01
NUP50-217ENST00000491860 D6RAR5 112 aa8.77□□□□□ -1.01
NUP50-217ENST00000491860 PLD2O14939 933 aa8.77□□□□□ -1.01
NUP50-217ENST00000491860 KRT7P08729 469 aa8.77□□□□□ -1.01
NUP50-217ENST00000491860 MYF5P13349 255 aa8.77□□□□□ -1.01
NUP50-217ENST00000491860 ZNF30P17039 623 aa8.77□□□□□ -1.01
NUP50-217ENST00000491860 ITIH2P19823 946 aa8.77□□□□□ -1.01
NUP50-217ENST00000491860 CR2P20023 1033 aa8.77□□□□□ -1.01
NUP50-217ENST00000491860 CCKBRP32239 447 aa8.77□□□□□ -1.01
NUP50-217ENST00000491860 MMP13P45452 471 aa8.77□□□□□ -1.01
NUP50-217ENST00000491860 UBASH3AP57075 661 aa8.77□□□□□ -1.01
NUP50-217ENST00000491860 CXADRP78310 365 aa8.77□□□□□ -1.01
NUP50-217ENST00000491860 ILF3Q12906 894 aaKnown RBP eCLIP8.77□□□□□ -1.01
NUP50-217ENST00000491860 RALGDSQ12967 914 aa8.77□□□□□ -1.01
NUP50-217ENST00000491860 IQCB1Q15051 598 aa8.77□□□□□ -1.01
NUP50-217ENST00000491860 C14orf28Q4W4Y0 310 aa8.77□□□□□ -1.01
NUP50-217ENST00000491860 PERM1Q5SV97 790 aa8.77□□□□□ -1.01
NUP50-217ENST00000491860 CCDC122Q5T0U0 273 aa8.77□□□□□ -1.01
NUP50-217ENST00000491860 ARMC12Q5T9G4 340 aa8.77□□□□□ -1.01
NUP50-217ENST00000491860 PNCKQ6P2M8 343 aa8.77□□□□□ -1.01
NUP50-217ENST00000491860 OGFOD3Q6PK18 319 aa8.77□□□□□ -1.01
NUP50-217ENST00000491860 CYP4V2Q6ZWL3 525 aaPredicted RBP8.77□□□□□ -1.01
NUP50-217ENST00000491860 NLRP8Q86W28 1048 aa8.77□□□□□ -1.01
NUP50-217ENST00000491860 ZSWIM9Q86XI8 627 aa8.77□□□□□ -1.01
NUP50-217ENST00000491860 NPWQ8N729 165 aa8.77□□□□□ -1.01
NUP50-217ENST00000491860 KYQ8NBH2 561 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms